RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 PMF1Q6P1K2 205 aa7.22□□□□□ -1.25
HMGN1-205ENST00000419378 DENND1BQ6P3S1 775 aa7.22□□□□□ -1.25
HMGN1-205ENST00000419378 PKN3Q6P5Z2 889 aa7.22□□□□□ -1.25
HMGN1-205ENST00000419378 RHBDF2Q6PJF5 856 aa7.22□□□□□ -1.25
HMGN1-205ENST00000419378 SASS6Q6UVJ0 657 aa7.22□□□□□ -1.25
HMGN1-205ENST00000419378 ZNF574Q6ZN55 896 aaPredicted RBP7.22□□□□□ -1.25
HMGN1-205ENST00000419378 HTR3DQ70Z44 454 aa7.22□□□□□ -1.25
HMGN1-205ENST00000419378 RSRC2Q7L4I2 434 aaKnown RBP7.22□□□□□ -1.25
HMGN1-205ENST00000419378 ASCL5Q7RTU5 278 aa7.22□□□□□ -1.25
HMGN1-205ENST00000419378 SCML4Q8N228 414 aa7.22□□□□□ -1.25
HMGN1-205ENST00000419378 ZBTB44Q8NCP5 570 aa7.22□□□□□ -1.25
HMGN1-205ENST00000419378 SHC3Q92529 594 aa7.22□□□□□ -1.25
HMGN1-205ENST00000419378 HSFY1Q96LI6 401 aa7.22□□□□□ -1.25
HMGN1-205ENST00000419378 CLUHP3Q96NS8 147 aa7.22□□□□□ -1.25
HMGN1-205ENST00000419378 FAM126AQ9BYI3 521 aaPredicted RBP7.22□□□□□ -1.25
HMGN1-205ENST00000419378 CARS2Q9HA77 564 aaKnown RBP7.22□□□□□ -1.25
HMGN1-205ENST00000419378 ACP6Q9NPH0 428 aa7.22□□□□□ -1.25
HMGN1-205ENST00000419378 ANO10Q9NW15 660 aa7.22□□□□□ -1.25
HMGN1-205ENST00000419378 ZSCAN32Q9NX65 697 aa7.22□□□□□ -1.25
HMGN1-205ENST00000419378 TAB2Q9NYJ8 693 aa7.22□□□□□ -1.25
HMGN1-205ENST00000419378 TMEFF2Q9UIK5 374 aaPredicted RBP7.22□□□□□ -1.25
HMGN1-205ENST00000419378 PCDHGA2Q9Y5H1 932 aa7.22□□□□□ -1.25
HMGN1-205ENST00000419378 ZNF292O60281 2723 aa7.22□□□□□ -1.25
HMGN1-205ENST00000419378 MYOFQ9NZM1 2061 aa7.21□□□□□ -1.25
HMGN1-205ENST00000419378 EP300Q09472 2414 aaPredicted RBP7.21□□□□□ -1.25
HMGN1-205ENST00000419378 K7EQS6 105 aa7.21□□□□□ -1.26
HMGN1-205ENST00000419378 K7ESF4 209 aa7.21□□□□□ -1.26
HMGN1-205ENST00000419378 PES1O00541 588 aaKnown RBP7.21□□□□□ -1.26
HMGN1-205ENST00000419378 FGF10O15520 208 aaPredicted RBP7.21□□□□□ -1.26
HMGN1-205ENST00000419378 THAP12O43422 761 aa7.21□□□□□ -1.26
HMGN1-205ENST00000419378 MED7O43513 233 aa7.21□□□□□ -1.26
HMGN1-205ENST00000419378 ATG13O75143 517 aa7.21□□□□□ -1.26
HMGN1-205ENST00000419378 TULP3O75386 442 aa7.21□□□□□ -1.26
HMGN1-205ENST00000419378 LETM1O95202 739 aaPredicted RBP7.21□□□□□ -1.26
HMGN1-205ENST00000419378 KLKB1P03952 638 aa7.21□□□□□ -1.26
HMGN1-205ENST00000419378 HMBSP08397 361 aa7.21□□□□□ -1.26
HMGN1-205ENST00000419378 CD8BP10966 210 aa7.21□□□□□ -1.26
HMGN1-205ENST00000419378 CORO1AP31146 461 aaKnown RBP7.21□□□□□ -1.26
HMGN1-205ENST00000419378 HOXC13P31276 330 aa7.21□□□□□ -1.26
HMGN1-205ENST00000419378 USP8P40818 1118 aa7.21□□□□□ -1.26
HMGN1-205ENST00000419378 EIF2DP41214 584 aaKnown RBP7.21□□□□□ -1.26
HMGN1-205ENST00000419378 GPD2P43304 727 aa7.21□□□□□ -1.26
HMGN1-205ENST00000419378 SLC6A11P48066 632 aa7.21□□□□□ -1.26
HMGN1-205ENST00000419378 RPL34P49207 117 aaKnown RBP7.21□□□□□ -1.26
HMGN1-205ENST00000419378 MYL5Q02045 173 aa7.21□□□□□ -1.26
HMGN1-205ENST00000419378 KDSRQ06136 332 aa7.21□□□□□ -1.26
HMGN1-205ENST00000419378 DMWDQ09019 674 aa7.21□□□□□ -1.26
HMGN1-205ENST00000419378 MESP2Q0VG99 397 aa7.21□□□□□ -1.26
HMGN1-205ENST00000419378 MEA1Q16626 185 aa7.21□□□□□ -1.26
HMGN1-205ENST00000419378 ANO4Q32M45 955 aa7.21□□□□□ -1.26
HMGN1-205ENST00000419378 BSPRYQ5W0U4 402 aa7.21□□□□□ -1.26
HMGN1-205ENST00000419378 DPY19L2P1Q6NXN4 242 aa7.21□□□□□ -1.26
HMGN1-205ENST00000419378 TMEM25Q86YD3 366 aa7.21□□□□□ -1.26
HMGN1-205ENST00000419378 PPIL6Q8IXY8 311 aa7.21□□□□□ -1.26
HMGN1-205ENST00000419378 RPLP0P6Q8NHW5 317 aa7.21□□□□□ -1.26
HMGN1-205ENST00000419378 CLEC4CQ8WTT0 213 aa7.21□□□□□ -1.26
HMGN1-205ENST00000419378 ZNF606Q8WXB4 792 aa7.21□□□□□ -1.26
HMGN1-205ENST00000419378 ATRIPQ8WXE1 791 aa7.21□□□□□ -1.26
HMGN1-205ENST00000419378 IRGQQ8WZA9 623 aa7.21□□□□□ -1.26
HMGN1-205ENST00000419378 PNKPQ96T60 521 aa7.21□□□□□ -1.26
HMGN1-205ENST00000419378 LSM14BQ9BX40 385 aaKnown RBP7.21□□□□□ -1.26
HMGN1-205ENST00000419378 MIS12Q9H081 205 aa7.21□□□□□ -1.26
HMGN1-205ENST00000419378 SPHK2Q9NRA0 654 aa7.21□□□□□ -1.26
HMGN1-205ENST00000419378 OLA1Q9NTK5 396 aaKnown RBP7.21□□□□□ -1.26
HMGN1-205ENST00000419378 MARCH2Q9P0N8 246 aa7.21□□□□□ -1.26
HMGN1-205ENST00000419378 NDOR1Q9UHB4 597 aa7.21□□□□□ -1.26
HMGN1-205ENST00000419378 CYTH4Q9UIA0 394 aa7.21□□□□□ -1.26
HMGN1-205ENST00000419378 DNAJC12Q9UKB3 198 aa7.21□□□□□ -1.26
HMGN1-205ENST00000419378 SLC5A6Q9Y289 635 aa7.21□□□□□ -1.26
HMGN1-205ENST00000419378 DCHS1Q96JQ0 3298 aa7.2□□□□□ -1.26
HMGN1-205ENST00000419378 ATG2BQ96BY7 2078 aa7.2□□□□□ -1.26
HMGN1-205ENST00000419378 PTPRZ1P23471 2315 aaPredicted RBP7.2□□□□□ -1.26
HMGN1-205ENST00000419378 SLC12A8A0AV02 714 aa7.2□□□□□ -1.26
HMGN1-205ENST00000419378 ANTXRLA6NF34 631 aa7.2□□□□□ -1.26
HMGN1-205ENST00000419378 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7.2□□□□□ -1.26
HMGN1-205ENST00000419378 NEDD8-MDP1E9PL57 170 aa7.2□□□□□ -1.26
HMGN1-205ENST00000419378 FOXN3O00409 490 aaPredicted RBP7.2□□□□□ -1.26
HMGN1-205ENST00000419378 MSI1O43347 362 aaKnown RBP7.2□□□□□ -1.26
HMGN1-205ENST00000419378 CACNG3O60359 315 aa7.2□□□□□ -1.26
HMGN1-205ENST00000419378 FBXO21O94952 628 aa7.2□□□□□ -1.26
HMGN1-205ENST00000419378 KAT7O95251 611 aa7.2□□□□□ -1.26
HMGN1-205ENST00000419378 LMNAP02545 664 aaKnown RBP7.2□□□□□ -1.26
HMGN1-205ENST00000419378 APODP05090 189 aa7.2□□□□□ -1.26
HMGN1-205ENST00000419378 PNMA6AP0CW24 399 aaPredicted RBP7.2□□□□□ -1.26
HMGN1-205ENST00000419378 TYRP14679 529 aa7.2□□□□□ -1.26
HMGN1-205ENST00000419378 FNTBP49356 437 aa7.2□□□□□ -1.26
HMGN1-205ENST00000419378 GABREP78334 506 aa7.2□□□□□ -1.26
HMGN1-205ENST00000419378 COG7P83436 770 aa7.2□□□□□ -1.26
HMGN1-205ENST00000419378 PDCLQ13371 301 aa7.2□□□□□ -1.26
HMGN1-205ENST00000419378 RAPGEF1Q13905 1077 aa7.2□□□□□ -1.26
HMGN1-205ENST00000419378 KRT31Q15323 416 aa7.2□□□□□ -1.26
HMGN1-205ENST00000419378 FNDC3BQ53EP0 1204 aaKnown RBP7.2□□□□□ -1.26
HMGN1-205ENST00000419378 ACBD5Q5T8D3 534 aaPredicted RBP7.2□□□□□ -1.26
HMGN1-205ENST00000419378 KLHDC7AQ5VTJ3 777 aa7.2□□□□□ -1.26
HMGN1-205ENST00000419378 MSANTD2Q6P1R3 559 aa7.2□□□□□ -1.26
HMGN1-205ENST00000419378 SLC47A2Q86VL8 602 aa7.2□□□□□ -1.26
HMGN1-205ENST00000419378 WFDC3Q8IUB2 231 aa7.2□□□□□ -1.26
HMGN1-205ENST00000419378 FMNL3Q8IVF7 1028 aa7.2□□□□□ -1.26
HMGN1-205ENST00000419378 SFTPA1Q8IWL2 248 aa7.2□□□□□ -1.26
HMGN1-205ENST00000419378 FAM71AQ8IYT1 594 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms