RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 BOCQ9BWV1 1114 aa5.75□□□□□ -1.49
ECHDC1-206ENST00000417628 VCX3BQ9H321 246 aa5.75□□□□□ -1.49
ECHDC1-206ENST00000417628 BOLA2Q9H3K6 86 aa5.75□□□□□ -1.49
ECHDC1-206ENST00000417628 EPB41L1Q9H4G0 881 aa5.75□□□□□ -1.49
ECHDC1-206ENST00000417628 EBF3Q9H4W6 596 aa5.75□□□□□ -1.49
ECHDC1-206ENST00000417628 EBF2Q9HAK2 575 aa5.75□□□□□ -1.49
ECHDC1-206ENST00000417628 SP110Q9HB58 689 aa5.75□□□□□ -1.49
ECHDC1-206ENST00000417628 GKN1Q9NS71 199 aa5.75□□□□□ -1.49
ECHDC1-206ENST00000417628 C6orf203Q9P0P8 240 aaPredicted RBP5.75□□□□□ -1.49
ECHDC1-206ENST00000417628 IMPACTQ9P2X3 320 aa5.75□□□□□ -1.49
ECHDC1-206ENST00000417628 TUBGCP4Q9UGJ1 667 aa5.75□□□□□ -1.49
ECHDC1-206ENST00000417628 PCSK1NQ9UHG2 260 aa5.75□□□□□ -1.49
ECHDC1-206ENST00000417628 ANAPC2Q9UJX6 822 aa5.75□□□□□ -1.49
ECHDC1-206ENST00000417628 FBXO9Q9UK97 447 aaPredicted RBP5.75□□□□□ -1.49
ECHDC1-206ENST00000417628 TBX20Q9UMR3 447 aa5.75□□□□□ -1.49
ECHDC1-206ENST00000417628 CLCA2Q9UQC9 943 aa5.75□□□□□ -1.49
ECHDC1-206ENST00000417628 SLC5A6Q9Y289 635 aa5.75□□□□□ -1.49
ECHDC1-206ENST00000417628 N6AMT1Q9Y5N5 214 aa5.75□□□□□ -1.49
ECHDC1-206ENST00000417628 IKBKGQ9Y6K9 419 aa5.75□□□□□ -1.49
ECHDC1-206ENST00000417628 FAM169AQ9Y6X4 670 aa5.75□□□□□ -1.49
ECHDC1-206ENST00000417628 SPTBN1Q01082 2364 aaKnown RBP5.75□□□□□ -1.49
ECHDC1-206ENST00000417628 TCHHQ07283 1943 aa5.75□□□□□ -1.49
ECHDC1-206ENST00000417628 GOLGA4Q13439 2230 aaKnown RBP5.75□□□□□ -1.49
ECHDC1-206ENST00000417628 SPENQ96T58 3664 aaKnown RBP5.75□□□□□ -1.49
ECHDC1-206ENST00000417628 IGKV6D-21A0A0A0MT36 114 aa5.74□□□□□ -1.49
ECHDC1-206ENST00000417628 IGHV1OR15-9A0A0B4J2B8 117 aa5.74□□□□□ -1.49
ECHDC1-206ENST00000417628 GOLGA6L10A0A0M3HER8 536 aa5.74□□□□□ -1.49
ECHDC1-206ENST00000417628 GOLGA6L7A0A1B0GV03 622 aa5.74□□□□□ -1.49
ECHDC1-206ENST00000417628 TCRBV21S2A2A0A5A6 115 aa5.74□□□□□ -1.49
ECHDC1-206ENST00000417628 ZBTB5O15062 677 aa5.74□□□□□ -1.49
ECHDC1-206ENST00000417628 PRC1O43663 620 aa5.74□□□□□ -1.49
ECHDC1-206ENST00000417628 ULK1O75385 1050 aa5.74□□□□□ -1.49
ECHDC1-206ENST00000417628 KIAA0754O94854 1291 aa5.74□□□□□ -1.49
ECHDC1-206ENST00000417628 CLDN1O95832 211 aa5.74□□□□□ -1.49
ECHDC1-206ENST00000417628 PRNPP04156 253 aa5.74□□□□□ -1.49
ECHDC1-206ENST00000417628 MPOP05164 745 aa5.74□□□□□ -1.49
ECHDC1-206ENST00000417628 RNF224P0DH78 156 aa5.74□□□□□ -1.49
ECHDC1-206ENST00000417628 ATP5JP18859 108 aa5.74□□□□□ -1.49
ECHDC1-206ENST00000417628 CCNCP24863 283 aa5.74□□□□□ -1.49
ECHDC1-206ENST00000417628 ACADVLP49748 655 aa5.74□□□□□ -1.49
ECHDC1-206ENST00000417628 CSE1LP55060 971 aaKnown RBP5.74□□□□□ -1.49
ECHDC1-206ENST00000417628 GSDMDP57764 484 aa5.74□□□□□ -1.49
ECHDC1-206ENST00000417628 SULT2A1Q06520 285 aa5.74□□□□□ -1.49
ECHDC1-206ENST00000417628 BLMHQ13867 455 aa5.74□□□□□ -1.49
ECHDC1-206ENST00000417628 TUBB2AQ13885 445 aa5.74□□□□□ -1.49
ECHDC1-206ENST00000417628 KCNB1Q14721 858 aa5.74□□□□□ -1.49
ECHDC1-206ENST00000417628 NAA25Q14CX7 972 aa5.74□□□□□ -1.49
ECHDC1-206ENST00000417628 RCN1Q15293 331 aa5.74□□□□□ -1.49
ECHDC1-206ENST00000417628 E2F5Q15329 346 aa5.74□□□□□ -1.49
ECHDC1-206ENST00000417628 SEC23AQ15436 765 aa5.74□□□□□ -1.49
ECHDC1-206ENST00000417628 SNCBQ16143 134 aa5.74□□□□□ -1.49
ECHDC1-206ENST00000417628 TPD52L1Q16890 204 aaPredicted RBP5.74□□□□□ -1.49
ECHDC1-206ENST00000417628 STXBP5Q5T5C0 1151 aa5.74□□□□□ -1.49
ECHDC1-206ENST00000417628 MROH9Q5TGP6 573 aa5.74□□□□□ -1.49
ECHDC1-206ENST00000417628 TRIM68Q6AZZ1 485 aa5.74□□□□□ -1.49
ECHDC1-206ENST00000417628 OLFML1Q6UWY5 402 aa5.74□□□□□ -1.49
ECHDC1-206ENST00000417628 CATSPER4Q7RTX7 472 aa5.74□□□□□ -1.49
ECHDC1-206ENST00000417628 PLA2G4DQ86XP0 818 aa5.74□□□□□ -1.49
ECHDC1-206ENST00000417628 NOSTRINQ8IVI9 506 aa5.74□□□□□ -1.49
ECHDC1-206ENST00000417628 TCEAL8Q8IYN2 117 aa5.74□□□□□ -1.49
ECHDC1-206ENST00000417628 ZCCHC9Q8N567 271 aaKnown RBP5.74□□□□□ -1.49
ECHDC1-206ENST00000417628 TTC39CQ8N584 583 aa5.74□□□□□ -1.49
ECHDC1-206ENST00000417628 TEX9Q8N6V9 391 aa5.74□□□□□ -1.49
ECHDC1-206ENST00000417628 DCBLD1Q8N8Z6 715 aa5.74□□□□□ -1.49
ECHDC1-206ENST00000417628 ZBTB8BQ8NAP8 495 aaPredicted RBP5.74□□□□□ -1.49
ECHDC1-206ENST00000417628 CNNM3Q8NE01 707 aa5.74□□□□□ -1.49
ECHDC1-206ENST00000417628 ZNF461Q8TAF7 563 aa5.74□□□□□ -1.49
ECHDC1-206ENST00000417628 SMARCC2Q8TAQ2 1214 aa5.74□□□□□ -1.49
ECHDC1-206ENST00000417628 TAF4BQ92750 862 aa5.74□□□□□ -1.49
ECHDC1-206ENST00000417628 SLC5A5Q92911 643 aa5.74□□□□□ -1.49
ECHDC1-206ENST00000417628 SCYL1Q96KG9 808 aa5.74□□□□□ -1.49
ECHDC1-206ENST00000417628 MMS19Q96T76 1030 aa5.74□□□□□ -1.49
ECHDC1-206ENST00000417628 MENTQ9BUN1 341 aa5.74□□□□□ -1.49
ECHDC1-206ENST00000417628 CCDC28BQ9BUN5 200 aa5.74□□□□□ -1.49
ECHDC1-206ENST00000417628 TUBB2BQ9BVA1 445 aa5.74□□□□□ -1.49
ECHDC1-206ENST00000417628 PARD6BQ9BYG5 372 aa5.74□□□□□ -1.49
ECHDC1-206ENST00000417628 INO80BQ9C086 356 aaPredicted RBP5.74□□□□□ -1.49
ECHDC1-206ENST00000417628 MRPL46Q9H2W6 279 aaKnown RBP5.74□□□□□ -1.49
ECHDC1-206ENST00000417628 GOLPH3LQ9H4A5 285 aa5.74□□□□□ -1.49
ECHDC1-206ENST00000417628 CYP4F11Q9HBI6 524 aa5.74□□□□□ -1.49
ECHDC1-206ENST00000417628 SLC39A2Q9NP94 309 aa5.74□□□□□ -1.49
ECHDC1-206ENST00000417628 PRDM7Q9NQW5 492 aa5.74□□□□□ -1.49
ECHDC1-206ENST00000417628 ZNF302Q9NR11 478 aa5.74□□□□□ -1.49
ECHDC1-206ENST00000417628 KLC4Q9NSK0 619 aa5.74□□□□□ -1.49
ECHDC1-206ENST00000417628 AGPAT5Q9NUQ2 364 aa5.74□□□□□ -1.49
ECHDC1-206ENST00000417628 ATXN10Q9UBB4 475 aa5.74□□□□□ -1.49
ECHDC1-206ENST00000417628 CTNNAL1Q9UBT7 734 aa5.74□□□□□ -1.49
ECHDC1-206ENST00000417628 ZMAT5Q9UDW3 170 aaKnown RBP5.74□□□□□ -1.49
ECHDC1-206ENST00000417628 TMEM59LQ9UK28 342 aa5.74□□□□□ -1.49
ECHDC1-206ENST00000417628 ACSL6Q9UKU0 697 aa5.74□□□□□ -1.49
ECHDC1-206ENST00000417628 NOB1Q9ULX3 412 aaKnown RBP5.74□□□□□ -1.49
ECHDC1-206ENST00000417628 SPG11Q96JI7 2443 aa5.74□□□□□ -1.49
ECHDC1-206ENST00000417628 PI4KAP42356 2102 aa5.74□□□□□ -1.49
ECHDC1-206ENST00000417628 NFASCO94856 1347 aa5.74□□□□□ -1.49
ECHDC1-206ENST00000417628 CSMD1Q96PZ7 3565 aa5.73□□□□□ -1.49
ECHDC1-206ENST00000417628 TRIM64CA6NLI5 447 aa5.73□□□□□ -1.49
ECHDC1-206ENST00000417628 MEI4A8MW99 385 aa5.73□□□□□ -1.49
ECHDC1-206ENST00000417628 PCDHGA12O60330 932 aa5.73□□□□□ -1.49
ECHDC1-206ENST00000417628 ZNF189O75820 626 aaPredicted RBP5.73□□□□□ -1.49
ECHDC1-206ENST00000417628 FAM155BO75949 473 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms