RNA–Protein interactions for RNA: ENST00000415428.5

LMBR1-204, Transcript of limb development membrane protein 1, humanhuman

TSL 1 (best)

Gene LMBR1, Length 3,457 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-204ENST00000415428 SMYD3Q9H7B4 428 aa6.27□□□□□ -1.41
LMBR1-204ENST00000415428 PADI4Q9UM07 663 aa6.27□□□□□ -1.41
LMBR1-204ENST00000415428 ARID1BQ8NFD5 2236 aaPredicted RBP6.27□□□□□ -1.41
LMBR1-204ENST00000415428 IGF2RP11717 2491 aa6.27□□□□□ -1.41
LMBR1-204ENST00000415428 OTOGQ6ZRI0 2925 aa6.27□□□□□ -1.41
LMBR1-204ENST00000415428 A6NCN8 305 aa6.27□□□□□ -1.41
LMBR1-204ENST00000415428 P4HA2O15460 535 aa6.27□□□□□ -1.41
LMBR1-204ENST00000415428 FSBPO95073 299 aa6.27□□□□□ -1.41
LMBR1-204ENST00000415428 MT-ND3P03897 115 aa6.27□□□□□ -1.41
LMBR1-204ENST00000415428 CASP5P51878 434 aa6.27□□□□□ -1.41
LMBR1-204ENST00000415428 SPAG1Q07617 926 aa6.27□□□□□ -1.41
LMBR1-204ENST00000415428 NFATC4Q14934 902 aa6.27□□□□□ -1.41
LMBR1-204ENST00000415428 NCAPHQ15003 741 aa6.27□□□□□ -1.41
LMBR1-204ENST00000415428 ELOCQ15369 112 aa6.27□□□□□ -1.41
LMBR1-204ENST00000415428 EDRF1Q3B7T1 1238 aa6.27□□□□□ -1.41
LMBR1-204ENST00000415428 C14orf28Q4W4Y0 310 aa6.27□□□□□ -1.41
LMBR1-204ENST00000415428 IZUMO3Q5VZ72 239 aa6.27□□□□□ -1.41
LMBR1-204ENST00000415428 Q6ZPB1 254 aaPredicted RBP6.27□□□□□ -1.41
LMBR1-204ENST00000415428 TMEM110Q86TL2 294 aa6.27□□□□□ -1.41
LMBR1-204ENST00000415428 GATAD2AQ86YP4 633 aa6.27□□□□□ -1.41
LMBR1-204ENST00000415428 PHACTR4Q8IZ21 702 aa6.27□□□□□ -1.41
LMBR1-204ENST00000415428 NAT16Q8N8M0 369 aa6.27□□□□□ -1.41
LMBR1-204ENST00000415428 PHF10Q8WUB8 498 aaKnown RBP6.27□□□□□ -1.41
LMBR1-204ENST00000415428 KLHL6Q8WZ60 621 aa6.27□□□□□ -1.41
LMBR1-204ENST00000415428 PPP1R16AQ96I34 528 aa6.27□□□□□ -1.41
LMBR1-204ENST00000415428 TUBGCP5Q96RT8 1024 aa6.27□□□□□ -1.41
LMBR1-204ENST00000415428 CTRCQ99895 268 aa6.27□□□□□ -1.41
LMBR1-204ENST00000415428 C19orf43Q9BQ61 176 aa6.27□□□□□ -1.41
LMBR1-204ENST00000415428 NT5C1AQ9BXI3 368 aa6.27□□□□□ -1.41
LMBR1-204ENST00000415428 PDE11AQ9HCR9 933 aa6.27□□□□□ -1.41
LMBR1-204ENST00000415428 EPHA6Q9UF33 1036 aa6.27□□□□□ -1.41
LMBR1-204ENST00000415428 FREM2Q5SZK8 3169 aa6.26□□□□□ -1.41
LMBR1-204ENST00000415428 TCAF2A6NFQ2 919 aa6.26□□□□□ -1.41
LMBR1-204ENST00000415428 LILRA5A6NI73 299 aa6.26□□□□□ -1.41
LMBR1-204ENST00000415428 GOLGA8SH3BPF8 625 aa6.26□□□□□ -1.41
LMBR1-204ENST00000415428 ZBED1O96006 694 aa6.26□□□□□ -1.41
LMBR1-204ENST00000415428 IGHEP01854 428 aa6.26□□□□□ -1.41
LMBR1-204ENST00000415428 CDH5P33151 784 aaPredicted RBP6.26□□□□□ -1.41
LMBR1-204ENST00000415428 TSFMP43897 325 aaKnown RBP6.26□□□□□ -1.41
LMBR1-204ENST00000415428 SLC11A2P49281 568 aa6.26□□□□□ -1.41
LMBR1-204ENST00000415428 CDH4P55283 916 aa6.26□□□□□ -1.41
LMBR1-204ENST00000415428 PSMC1P62191 440 aaKnown RBP6.26□□□□□ -1.41
LMBR1-204ENST00000415428 BST2Q10589 180 aaKnown RBP6.26□□□□□ -1.41
LMBR1-204ENST00000415428 STAT4Q14765 748 aa6.26□□□□□ -1.41
LMBR1-204ENST00000415428 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.26□□□□□ -1.41
LMBR1-204ENST00000415428 AFMIDQ63HM1 303 aa6.26□□□□□ -1.41
LMBR1-204ENST00000415428 ESRP1Q6NXG1 681 aaKnown RBP6.26□□□□□ -1.41
LMBR1-204ENST00000415428 UNC13DQ70J99 1090 aa6.26□□□□□ -1.41
LMBR1-204ENST00000415428 GKN2Q86XP6 184 aa6.26□□□□□ -1.41
LMBR1-204ENST00000415428 SCN4BQ8IWT1 228 aa6.26□□□□□ -1.41
LMBR1-204ENST00000415428 ZSWIM2Q8NEG5 633 aa6.26□□□□□ -1.41
LMBR1-204ENST00000415428 FRMD8Q9BZ67 464 aaPredicted RBP6.26□□□□□ -1.41
LMBR1-204ENST00000415428 MAST4O15021 2626 aa6.26□□□□□ -1.41
LMBR1-204ENST00000415428 PSMD11O00231 422 aa6.26□□□□□ -1.41
LMBR1-204ENST00000415428 PPP6R2O75170 966 aa6.26□□□□□ -1.41
LMBR1-204ENST00000415428 MOCS3O95396 460 aa6.26□□□□□ -1.41
LMBR1-204ENST00000415428 RNF224P0DH78 156 aa6.26□□□□□ -1.41
LMBR1-204ENST00000415428 SLC2A3P11169 496 aa6.26□□□□□ -1.41
LMBR1-204ENST00000415428 NOP2P46087 812 aaKnown RBP6.26□□□□□ -1.41
LMBR1-204ENST00000415428 ADAM9Q13443 819 aa6.26□□□□□ -1.41
LMBR1-204ENST00000415428 IL11RAQ14626 422 aa6.26□□□□□ -1.41
LMBR1-204ENST00000415428 ZNF174Q15697 407 aa6.26□□□□□ -1.41
LMBR1-204ENST00000415428 RALGPS1Q5JS13 557 aa6.26□□□□□ -1.41
LMBR1-204ENST00000415428 KMT5CQ86Y97 462 aa6.26□□□□□ -1.41
LMBR1-204ENST00000415428 ESX1Q8N693 406 aa6.26□□□□□ -1.41
LMBR1-204ENST00000415428 GTPBP4Q9BZE4 634 aaKnown RBP6.26□□□□□ -1.41
LMBR1-204ENST00000415428 NIF3L1Q9GZT8 377 aa6.26□□□□□ -1.41
LMBR1-204ENST00000415428 RUBCNLQ9H714 662 aa6.26□□□□□ -1.41
LMBR1-204ENST00000415428 LIMCH1Q9UPQ0 1083 aa6.26□□□□□ -1.41
LMBR1-204ENST00000415428 ANKRD11Q6UB99 2663 aaPredicted RBP6.26□□□□□ -1.41
LMBR1-204ENST00000415428 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.26□□□□□ -1.41
LMBR1-204ENST00000415428 NPHP3-ACAD11A0A0J9YXS1 232 aa6.26□□□□□ -1.41
LMBR1-204ENST00000415428 TBCAO75347 108 aaKnown RBP6.26□□□□□ -1.41
LMBR1-204ENST00000415428 RFPL1O75677 317 aa6.26□□□□□ -1.41
LMBR1-204ENST00000415428 CD160O95971 181 aa6.26□□□□□ -1.41
LMBR1-204ENST00000415428 ERBB2P04626 1255 aa6.26□□□□□ -1.41
LMBR1-204ENST00000415428 CD1CP29017 333 aa6.26□□□□□ -1.41
LMBR1-204ENST00000415428 ETV5P41161 510 aa6.26□□□□□ -1.41
LMBR1-204ENST00000415428 CNTN1Q12860 1018 aa6.26□□□□□ -1.41
LMBR1-204ENST00000415428 ZNF177Q13360 481 aaPredicted RBP6.26□□□□□ -1.41
LMBR1-204ENST00000415428 KMT5BQ4FZB7 885 aa6.26□□□□□ -1.41
LMBR1-204ENST00000415428 DEFB119Q8N690 84 aa6.26□□□□□ -1.41
LMBR1-204ENST00000415428 KRI1Q8N9T8 703 aaKnown RBP6.26□□□□□ -1.41
LMBR1-204ENST00000415428 SLC2A14Q8TDB8 520 aa6.26□□□□□ -1.41
LMBR1-204ENST00000415428 C8orf76Q96K31 380 aa6.26□□□□□ -1.41
LMBR1-204ENST00000415428 FOXC2Q99958 501 aa6.26□□□□□ -1.41
LMBR1-204ENST00000415428 TEX101Q9BY14 249 aa6.26□□□□□ -1.41
LMBR1-204ENST00000415428 PCDHGA10Q9Y5H3 936 aa6.26□□□□□ -1.41
LMBR1-204ENST00000415428 IGHV5-10-1A0A0J9YXX1 117 aa6.25□□□□□ -1.41
LMBR1-204ENST00000415428 A0A1W2PP55 124 aa6.25□□□□□ -1.41
LMBR1-204ENST00000415428 A8MXQ7 604 aa6.25□□□□□ -1.41
LMBR1-204ENST00000415428 MASP2O00187 686 aa6.25□□□□□ -1.41
LMBR1-204ENST00000415428 CBX4O00257 560 aa6.25□□□□□ -1.41
LMBR1-204ENST00000415428 STX10O60499 249 aa6.25□□□□□ -1.41
LMBR1-204ENST00000415428 GM2AP17900 193 aa6.25□□□□□ -1.41
LMBR1-204ENST00000415428 IGFALSP35858 605 aa6.25□□□□□ -1.41
LMBR1-204ENST00000415428 NEK3P51956 506 aa6.25□□□□□ -1.41
LMBR1-204ENST00000415428 NDST1P52848 882 aa6.25□□□□□ -1.41
LMBR1-204ENST00000415428 MARSP56192 900 aaKnown RBP6.25□□□□□ -1.41
LMBR1-204ENST00000415428 MYL6P60660 151 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms