RNA–Protein interactions for RNA: ENST00000413146.6

TNFRSF8-202, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF8, Length 2,363 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-202ENST00000413146 RCN3Q96D15 328 aa19.32■□□□□ 0.68
TNFRSF8-202ENST00000413146 C1QTNF1Q9BXJ1 281 aa19.32■□□□□ 0.68
TNFRSF8-202ENST00000413146 DDIT4Q9NX09 232 aa19.32■□□□□ 0.68
TNFRSF8-202ENST00000413146 COMMD3-BMI1R4GMX3 469 aa19.32■□□□□ 0.68
TNFRSF8-202ENST00000413146 YJEFN3A6XGL0 299 aa19.31■□□□□ 0.68
TNFRSF8-202ENST00000413146 I6L893 689 aaPredicted RBP19.31■□□□□ 0.68
TNFRSF8-202ENST00000413146 GRID2O43424 1007 aa19.31■□□□□ 0.68
TNFRSF8-202ENST00000413146 DDHD2O94830 711 aa19.31■□□□□ 0.68
TNFRSF8-202ENST00000413146 DDNO94850 711 aaPredicted RBP19.31■□□□□ 0.68
TNFRSF8-202ENST00000413146 SNAI1O95863 264 aaPredicted RBP19.31■□□□□ 0.68
TNFRSF8-202ENST00000413146 HOXD8P13378 290 aaPredicted RBP19.31■□□□□ 0.68
TNFRSF8-202ENST00000413146 NCAM1P13591 858 aa19.31■□□□□ 0.68
TNFRSF8-202ENST00000413146 TFEBP19484 476 aa19.31■□□□□ 0.68
TNFRSF8-202ENST00000413146 GRIA2P42262 883 aa19.31■□□□□ 0.68
TNFRSF8-202ENST00000413146 DAOAP59103 153 aa19.31■□□□□ 0.68
TNFRSF8-202ENST00000413146 MRPS22P82650 360 aaKnown RBP19.31■□□□□ 0.68
TNFRSF8-202ENST00000413146 SLC12A1Q13621 1099 aa19.31■□□□□ 0.68
TNFRSF8-202ENST00000413146 CNGA3Q16281 694 aa19.31■□□□□ 0.68
TNFRSF8-202ENST00000413146 ZFP1Q6P2D0 407 aa19.31■□□□□ 0.68
TNFRSF8-202ENST00000413146 LCA5Q86VQ0 697 aa19.31■□□□□ 0.68
TNFRSF8-202ENST00000413146 CPSF7Q8N684 471 aaKnown RBP19.31■□□□□ 0.68
TNFRSF8-202ENST00000413146 PPP1R13LQ8WUF5 828 aa19.31■□□□□ 0.68
TNFRSF8-202ENST00000413146 CATSPER2Q96P56 530 aa19.31■□□□□ 0.68
TNFRSF8-202ENST00000413146 TSPAN18Q96SJ8 248 aa19.31■□□□□ 0.68
TNFRSF8-202ENST00000413146 RUVBL2Q9Y230 463 aaKnown RBP19.31■□□□□ 0.68
TNFRSF8-202ENST00000413146 NUP205Q92621 2012 aa19.31■□□□□ 0.68
TNFRSF8-202ENST00000413146 RTN3O95197 1032 aaPredicted RBP19.3■□□□□ 0.68
TNFRSF8-202ENST00000413146 AMHP03971 560 aa19.3■□□□□ 0.68
TNFRSF8-202ENST00000413146 ADSLP30566 484 aaPredicted RBP19.3■□□□□ 0.68
TNFRSF8-202ENST00000413146 AVPR1AP37288 418 aa19.3■□□□□ 0.68
TNFRSF8-202ENST00000413146 CSRP3P50461 194 aa19.3■□□□□ 0.68
TNFRSF8-202ENST00000413146 SNAPC2Q13487 334 aa19.3■□□□□ 0.68
TNFRSF8-202ENST00000413146 ZNF423Q2M1K9 1284 aa19.3■□□□□ 0.68
TNFRSF8-202ENST00000413146 DUSP28Q4G0W2 176 aa19.3■□□□□ 0.68
TNFRSF8-202ENST00000413146 XKR4Q5GH76 650 aa19.3■□□□□ 0.68
TNFRSF8-202ENST00000413146 PIGGQ5H8A4 983 aa19.3■□□□□ 0.68
TNFRSF8-202ENST00000413146 WSCD1Q658N2 575 aa19.3■□□□□ 0.68
TNFRSF8-202ENST00000413146 PGAM4Q8N0Y7 254 aa19.3■□□□□ 0.68
TNFRSF8-202ENST00000413146 KCTD4Q8WVF5 259 aa19.3■□□□□ 0.68
TNFRSF8-202ENST00000413146 TEKT5Q96M29 485 aa19.3■□□□□ 0.68
TNFRSF8-202ENST00000413146 EPAS1Q99814 870 aa19.3■□□□□ 0.68
TNFRSF8-202ENST00000413146 ZDHHC2Q9UIJ5 367 aa19.3■□□□□ 0.68
TNFRSF8-202ENST00000413146 VPS28Q9UK41 221 aa19.3■□□□□ 0.68
TNFRSF8-202ENST00000413146 CFLARO15519 480 aa19.3■□□□□ 0.68
TNFRSF8-202ENST00000413146 AP1G1O43747 822 aa19.3■□□□□ 0.68
TNFRSF8-202ENST00000413146 SBK3P0C264 359 aa19.3■□□□□ 0.68
TNFRSF8-202ENST00000413146 ENO3P13929 434 aaPredicted RBP19.3■□□□□ 0.68
TNFRSF8-202ENST00000413146 XRCC1P18887 633 aaPredicted RBP19.3■□□□□ 0.68
TNFRSF8-202ENST00000413146 RABGGTBP53611 331 aa19.3■□□□□ 0.68
TNFRSF8-202ENST00000413146 LINC00523Q86TU6 105 aa19.3■□□□□ 0.68
TNFRSF8-202ENST00000413146 TMEM151AQ8N4L1 468 aa19.3■□□□□ 0.68
TNFRSF8-202ENST00000413146 CATSPER1Q8NEC5 780 aa19.3■□□□□ 0.68
TNFRSF8-202ENST00000413146 STYXQ8WUJ0 223 aa19.3■□□□□ 0.68
TNFRSF8-202ENST00000413146 SMIM31A0A1B0GVY4 71 aa19.29■□□□□ 0.68
TNFRSF8-202ENST00000413146 C9IYK1 514 aa19.29■□□□□ 0.68
TNFRSF8-202ENST00000413146 JCHAINP01591 159 aa19.29■□□□□ 0.68
TNFRSF8-202ENST00000413146 SLC35E2BP0CK96 405 aa19.29■□□□□ 0.68
TNFRSF8-202ENST00000413146 PKNOX1P55347 436 aa19.29■□□□□ 0.68
TNFRSF8-202ENST00000413146 GJA9P57773 515 aa19.29■□□□□ 0.68
TNFRSF8-202ENST00000413146 INHBEP58166 350 aa19.29■□□□□ 0.68
TNFRSF8-202ENST00000413146 ART3Q13508 389 aa19.29■□□□□ 0.68
TNFRSF8-202ENST00000413146 ADGRE1Q14246 886 aa19.29■□□□□ 0.68
TNFRSF8-202ENST00000413146 HERC3Q15034 1050 aa19.29■□□□□ 0.68
TNFRSF8-202ENST00000413146 TLR1Q15399 786 aa19.29■□□□□ 0.68
TNFRSF8-202ENST00000413146 LRRC8EQ6NSJ5 796 aa19.29■□□□□ 0.68
TNFRSF8-202ENST00000413146 TMEM126BQ8IUX1 230 aa19.29■□□□□ 0.68
TNFRSF8-202ENST00000413146 FSTL5Q8N475 847 aaPredicted RBP19.29■□□□□ 0.68
TNFRSF8-202ENST00000413146 MARVELD2Q8N4S9 558 aa19.29■□□□□ 0.68
TNFRSF8-202ENST00000413146 NAT14Q8WUY8 206 aa19.29■□□□□ 0.68
TNFRSF8-202ENST00000413146 STON2Q8WXE9 905 aa19.29■□□□□ 0.68
TNFRSF8-202ENST00000413146 ZNF385DQ9H6B1 395 aa19.29■□□□□ 0.68
TNFRSF8-202ENST00000413146 SMIM35A0A1B0GVV1 85 aa19.29■□□□□ 0.68
TNFRSF8-202ENST00000413146 DENRO43583 198 aaKnown RBP19.29■□□□□ 0.68
TNFRSF8-202ENST00000413146 SMIM10L2AP0DMW4 78 aa19.29■□□□□ 0.68
TNFRSF8-202ENST00000413146 SMIM10L2BP0DMW5 78 aa19.29■□□□□ 0.68
TNFRSF8-202ENST00000413146 DNAJB2P25686 324 aa19.29■□□□□ 0.68
TNFRSF8-202ENST00000413146 PGGT1BP53609 377 aa19.29■□□□□ 0.68
TNFRSF8-202ENST00000413146 SH3BGRP55822 239 aaPredicted RBP19.29■□□□□ 0.68
TNFRSF8-202ENST00000413146 PDCD2Q16342 344 aaPredicted RBP19.29■□□□□ 0.68
TNFRSF8-202ENST00000413146 UGP2Q16851 508 aa19.29■□□□□ 0.68
TNFRSF8-202ENST00000413146 TMEM198Q66K66 360 aa19.29■□□□□ 0.68
TNFRSF8-202ENST00000413146 ZNF467Q7Z7K2 595 aaPredicted RBP19.29■□□□□ 0.68
TNFRSF8-202ENST00000413146 SATL1Q86VE3 508 aa19.29■□□□□ 0.68
TNFRSF8-202ENST00000413146 SLC41A1Q8IVJ1 513 aa19.29■□□□□ 0.68
TNFRSF8-202ENST00000413146 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP19.29■□□□□ 0.68
TNFRSF8-202ENST00000413146 CDCA5Q96FF9 252 aa19.29■□□□□ 0.68
TNFRSF8-202ENST00000413146 HAPLN3Q96S86 360 aa19.29■□□□□ 0.68
TNFRSF8-202ENST00000413146 KIFC1Q9BW19 673 aa19.29■□□□□ 0.68
TNFRSF8-202ENST00000413146 WDR41Q9HAD4 459 aa19.29■□□□□ 0.68
TNFRSF8-202ENST00000413146 PSMD3O43242 534 aa19.28■□□□□ 0.68
TNFRSF8-202ENST00000413146 COL6A2P12110 1019 aa19.28■□□□□ 0.68
TNFRSF8-202ENST00000413146 ETS2P15036 469 aa19.28■□□□□ 0.68
TNFRSF8-202ENST00000413146 YBX3P16989 372 aaKnown RBP eCLIP19.28■□□□□ 0.68
TNFRSF8-202ENST00000413146 PMLP29590 882 aa19.28■□□□□ 0.68
TNFRSF8-202ENST00000413146 BHLHE22Q8NFJ8 381 aaPredicted RBP19.28■□□□□ 0.68
TNFRSF8-202ENST00000413146 GTF3C2Q8WUA4 911 aaPredicted RBP19.28■□□□□ 0.68
TNFRSF8-202ENST00000413146 TMEM40Q8WWA1 233 aa19.28■□□□□ 0.68
TNFRSF8-202ENST00000413146 USP13Q92995 863 aaPredicted RBP19.28■□□□□ 0.68
TNFRSF8-202ENST00000413146 COLEC11Q9BWP8 271 aa19.28■□□□□ 0.68
TNFRSF8-202ENST00000413146 ZBTB26Q9HCK0 441 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms