RNA–Protein interactions for RNA: ENST00000410828.1

RNU4-53P-201, Transcript of RNA, U4 small nuclear 53, pseudogene, humanhuman

BASIC

Gene RNU4-53P, Length 140 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-53P-201ENST00000410828 VPS4AQ9UN37 437 aa2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 DOLKQ9UPQ8 538 aa2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 PLAAQ9Y263 795 aa2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 TLR6Q9Y2C9 796 aa2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 FRMD4BQ9Y2L6 1034 aa2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 LOXL2Q9Y4K0 774 aa2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 CLIC4Q9Y696 253 aa2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 MED13Q9UHV7 2174 aa2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 CNTRLQ7Z7A1 2325 aa2.42□□□□□ -2.02
RNU4-53P-201ENST00000410828 PVALEFA0A1B0GWK0 134 aa2.42□□□□□ -2.02
RNU4-53P-201ENST00000410828 A0A1W2PQM1 296 aa2.42□□□□□ -2.02
RNU4-53P-201ENST00000410828 VPS37CA5D8V6 355 aaPredicted RBP2.42□□□□□ -2.02
RNU4-53P-201ENST00000410828 TCAF2A6NFQ2 919 aa2.42□□□□□ -2.02
RNU4-53P-201ENST00000410828 TTLL8A6PVC2 850 aa2.42□□□□□ -2.02
RNU4-53P-201ENST00000410828 ZNF891A8MT65 544 aaPredicted RBP2.42□□□□□ -2.02
RNU4-53P-201ENST00000410828 C9orf172C9J069 976 aa2.42□□□□□ -2.02
RNU4-53P-201ENST00000410828 F5H5T6 163 aa2.42□□□□□ -2.02
RNU4-53P-201ENST00000410828 STMND1H3BQB6 276 aa2.42□□□□□ -2.02
RNU4-53P-201ENST00000410828 AGRPO00253 132 aa2.42□□□□□ -2.02
RNU4-53P-201ENST00000410828 TULP2O00295 520 aa2.42□□□□□ -2.02
RNU4-53P-201ENST00000410828 O00370 1275 aa2.42□□□□□ -2.02
RNU4-53P-201ENST00000410828 PDXKO00764 312 aa2.42□□□□□ -2.02
RNU4-53P-201ENST00000410828 NEMP1O14524 444 aa2.42□□□□□ -2.02
RNU4-53P-201ENST00000410828 TOR1BO14657 336 aa2.42□□□□□ -2.02
RNU4-53P-201ENST00000410828 CASC3O15234 703 aaKnown RBP2.42□□□□□ -2.02
RNU4-53P-201ENST00000410828 RAD51BO15315 384 aa2.42□□□□□ -2.02
RNU4-53P-201ENST00000410828 ZW10O43264 779 aa2.42□□□□□ -2.02
RNU4-53P-201ENST00000410828 SPINT1O43278 529 aa2.42□□□□□ -2.02
RNU4-53P-201ENST00000410828 SART1O43290 800 aaKnown RBP2.42□□□□□ -2.02
RNU4-53P-201ENST00000410828 MTSS1O43312 755 aa2.42□□□□□ -2.02
RNU4-53P-201ENST00000410828 TSPAN6O43657 245 aa2.42□□□□□ -2.02
RNU4-53P-201ENST00000410828 GCATO75600 419 aa2.42□□□□□ -2.02
RNU4-53P-201ENST00000410828 CNTN5O94779 1100 aa2.42□□□□□ -2.02
RNU4-53P-201ENST00000410828 FBXO21O94952 628 aa2.42□□□□□ -2.02
RNU4-53P-201ENST00000410828 RASGRP1O95267 797 aa2.42□□□□□ -2.02
RNU4-53P-201ENST00000410828 DDAH2O95865 285 aa2.42□□□□□ -2.02
RNU4-53P-201ENST00000410828 MOCS2O96007 188 aaPredicted RBP2.42□□□□□ -2.02
RNU4-53P-201ENST00000410828 LTFP02788 710 aa2.42□□□□□ -2.02
RNU4-53P-201ENST00000410828 NR3C1P04150 777 aa2.42□□□□□ -2.02
RNU4-53P-201ENST00000410828 CTSLP07711 333 aa2.42□□□□□ -2.02
RNU4-53P-201ENST00000410828 KRT7P08729 469 aa2.42□□□□□ -2.02
RNU4-53P-201ENST00000410828 ALPIP09923 528 aa2.42□□□□□ -2.02
RNU4-53P-201ENST00000410828 SETSIPP0DME0 302 aa2.42□□□□□ -2.02
RNU4-53P-201ENST00000410828 VDRP11473 427 aa2.42□□□□□ -2.02
RNU4-53P-201ENST00000410828 KRT13P13646 458 aa2.42□□□□□ -2.02
RNU4-53P-201ENST00000410828 LCP1P13796 627 aa2.42□□□□□ -2.02
RNU4-53P-201ENST00000410828 CTSEP14091 401 aa2.42□□□□□ -2.02
RNU4-53P-201ENST00000410828 CD19P15391 556 aa2.42□□□□□ -2.02
RNU4-53P-201ENST00000410828 PNLIPP16233 465 aa2.42□□□□□ -2.02
RNU4-53P-201ENST00000410828 GLB1P16278 677 aa2.42□□□□□ -2.02
RNU4-53P-201ENST00000410828 TSHRP16473 764 aa2.42□□□□□ -2.02
RNU4-53P-201ENST00000410828 WT1P19544 449 aaPredicted RBP2.42□□□□□ -2.02
RNU4-53P-201ENST00000410828 ITIH1P19827 911 aa2.42□□□□□ -2.02
RNU4-53P-201ENST00000410828 TACR2P21452 398 aa2.42□□□□□ -2.02
RNU4-53P-201ENST00000410828 ELAVL4P26378 380 aaKnown RBP2.42□□□□□ -2.02
RNU4-53P-201ENST00000410828 TNFRSF8P28908 595 aa2.42□□□□□ -2.02
RNU4-53P-201ENST00000410828 GTF2H1P32780 548 aa2.42□□□□□ -2.02
RNU4-53P-201ENST00000410828 ETV5P41161 510 aa2.42□□□□□ -2.02
RNU4-53P-201ENST00000410828 NOP2P46087 812 aaKnown RBP2.42□□□□□ -2.02
RNU4-53P-201ENST00000410828 GCLMP48507 274 aa2.42□□□□□ -2.02
RNU4-53P-201ENST00000410828 NUMBP49757 651 aa2.42□□□□□ -2.02
RNU4-53P-201ENST00000410828 BLKP51451 505 aa2.42□□□□□ -2.02
RNU4-53P-201ENST00000410828 CLCN6P51797 869 aa2.42□□□□□ -2.02
RNU4-53P-201ENST00000410828 NEK3P51956 506 aa2.42□□□□□ -2.02
RNU4-53P-201ENST00000410828 RAD23BP54727 409 aa2.42□□□□□ -2.02
RNU4-53P-201ENST00000410828 DAOAP59103 153 aa2.42□□□□□ -2.02
RNU4-53P-201ENST00000410828 PFN3P60673 137 aa2.42□□□□□ -2.02
RNU4-53P-201ENST00000410828 YWHAEP62258 255 aaKnown RBP2.42□□□□□ -2.02
RNU4-53P-201ENST00000410828 KRT83P78385 493 aa2.42□□□□□ -2.02
RNU4-53P-201ENST00000410828 PPARDQ03181 441 aa2.42□□□□□ -2.02
RNU4-53P-201ENST00000410828 CEBPZQ03701 1054 aaKnown RBP2.42□□□□□ -2.02
RNU4-53P-201ENST00000410828 ZFP36L1Q07352 338 aaKnown RBP2.42□□□□□ -2.02
RNU4-53P-201ENST00000410828 PPP3CAQ08209 521 aa2.42□□□□□ -2.02
RNU4-53P-201ENST00000410828 EIF2B5Q13144 721 aaKnown RBP2.42□□□□□ -2.02
RNU4-53P-201ENST00000410828 SEPT6Q14141 434 aa2.42□□□□□ -2.02
RNU4-53P-201ENST00000410828 SLC39A14Q15043 492 aa2.42□□□□□ -2.02
RNU4-53P-201ENST00000410828 GOLGA7BQ2TAP0 167 aa2.42□□□□□ -2.02
RNU4-53P-201ENST00000410828 TMEM259Q4ZIN3 620 aa2.42□□□□□ -2.02
RNU4-53P-201ENST00000410828 LACTB2Q53H82 288 aaPredicted RBP2.42□□□□□ -2.02
RNU4-53P-201ENST00000410828 RABGAP1LQ5R372 815 aa2.42□□□□□ -2.02
RNU4-53P-201ENST00000410828 PIP5KL1Q5T9C9 394 aa2.42□□□□□ -2.02
RNU4-53P-201ENST00000410828 FAXCQ5TGI0 409 aa2.42□□□□□ -2.02
RNU4-53P-201ENST00000410828 TTC39BQ5VTQ0 682 aaPredicted RBP2.42□□□□□ -2.02
RNU4-53P-201ENST00000410828 RAP1GAP2Q684P5 730 aa2.42□□□□□ -2.02
RNU4-53P-201ENST00000410828 KRT39Q6A163 491 aa2.42□□□□□ -2.02
RNU4-53P-201ENST00000410828 CNNM4Q6P4Q7 775 aa2.42□□□□□ -2.02
RNU4-53P-201ENST00000410828 LVRNQ6Q4G3 990 aa2.42□□□□□ -2.02
RNU4-53P-201ENST00000410828 Q6ZVU0 165 aa2.42□□□□□ -2.02
RNU4-53P-201ENST00000410828 INTS8Q75QN2 995 aaKnown RBP2.42□□□□□ -2.02
RNU4-53P-201ENST00000410828 HEATR4Q86WZ0 1026 aa2.42□□□□□ -2.02
RNU4-53P-201ENST00000410828 CHSY1Q86X52 802 aa2.42□□□□□ -2.02
RNU4-53P-201ENST00000410828 GKN2Q86XP6 184 aa2.42□□□□□ -2.02
RNU4-53P-201ENST00000410828 CCNJLQ8IV13 435 aa2.42□□□□□ -2.02
RNU4-53P-201ENST00000410828 RBFAQ8N0V3 343 aa2.42□□□□□ -2.02
RNU4-53P-201ENST00000410828 FSTL5Q8N475 847 aaPredicted RBP2.42□□□□□ -2.02
RNU4-53P-201ENST00000410828 SH2D3CQ8N5H7 860 aa2.42□□□□□ -2.02
RNU4-53P-201ENST00000410828 EFCAB3Q8N7B9 438 aa2.42□□□□□ -2.02
RNU4-53P-201ENST00000410828 ATP6V0D2Q8N8Y2 350 aa2.42□□□□□ -2.02
RNU4-53P-201ENST00000410828 ATP11CQ8NB49 1132 aa2.42□□□□□ -2.02
RNU4-53P-201ENST00000410828 SLC4A11Q8NBS3 891 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms