RNA–Protein interactions for RNA: ENST00000409542.5

CHRNA1-205, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-205ENST00000409542 UBA3Q8TBC4 463 aa13.09□□□□□ -0.31
CHRNA1-205ENST00000409542 TTC17Q96AE7 1141 aa13.09□□□□□ -0.31
CHRNA1-205ENST00000409542 FCRL3Q96P31 734 aaPredicted RBP13.09□□□□□ -0.31
CHRNA1-205ENST00000409542 SELENOOQ9BVL4 669 aa13.09□□□□□ -0.31
CHRNA1-205ENST00000409542 FBRSQ9HAH7 460 aa13.09□□□□□ -0.31
CHRNA1-205ENST00000409542 TMEM8AQ9HCN3 771 aa13.09□□□□□ -0.31
CHRNA1-205ENST00000409542 APEX2Q9UBZ4 518 aa13.09□□□□□ -0.31
CHRNA1-205ENST00000409542 NCKAP1Q9Y2A7 1128 aa13.09□□□□□ -0.31
CHRNA1-205ENST00000409542 XPO1O14980 1071 aaKnown RBP13.08□□□□□ -0.32
CHRNA1-205ENST00000409542 DFNA5O60443 496 aa13.08□□□□□ -0.32
CHRNA1-205ENST00000409542 ATP5BP06576 529 aaKnown RBP13.08□□□□□ -0.32
CHRNA1-205ENST00000409542 MYBL2P10244 700 aa13.08□□□□□ -0.32
CHRNA1-205ENST00000409542 CETN1Q12798 172 aa13.08□□□□□ -0.32
CHRNA1-205ENST00000409542 RTP5Q14D33 572 aa13.08□□□□□ -0.32
CHRNA1-205ENST00000409542 INAVAQ3KP66 663 aa13.08□□□□□ -0.32
CHRNA1-205ENST00000409542 FAM133BQ5BKY9 247 aaKnown RBP13.08□□□□□ -0.32
CHRNA1-205ENST00000409542 C9orf64Q5T6V5 341 aa13.08□□□□□ -0.32
CHRNA1-205ENST00000409542 EMBQ6PCB8 327 aa13.08□□□□□ -0.32
CHRNA1-205ENST00000409542 USP30Q70CQ3 517 aa13.08□□□□□ -0.32
CHRNA1-205ENST00000409542 MMAAQ8IVH4 418 aaKnown RBP13.08□□□□□ -0.32
CHRNA1-205ENST00000409542 SYCE1Q8N0S2 351 aa13.08□□□□□ -0.32
CHRNA1-205ENST00000409542 TPCN2Q8NHX9 752 aa13.08□□□□□ -0.32
CHRNA1-205ENST00000409542 LMO3Q8TAP4 145 aa13.08□□□□□ -0.32
CHRNA1-205ENST00000409542 CAVIN3Q969G5 261 aa13.08□□□□□ -0.32
CHRNA1-205ENST00000409542 PRICKLE1Q96MT3 831 aaPredicted RBP13.08□□□□□ -0.32
CHRNA1-205ENST00000409542 PSMB7Q99436 277 aa13.08□□□□□ -0.32
CHRNA1-205ENST00000409542 AASDHPPTQ9NRN7 309 aa13.08□□□□□ -0.32
CHRNA1-205ENST00000409542 OLA1Q9NTK5 396 aaKnown RBP13.08□□□□□ -0.32
CHRNA1-205ENST00000409542 SMARCAL1Q9NZC9 954 aa13.08□□□□□ -0.32
CHRNA1-205ENST00000409542 DMGDHQ9UI17 866 aaKnown RBP13.08□□□□□ -0.32
CHRNA1-205ENST00000409542 TSPAN16Q9UKR8 245 aa13.08□□□□□ -0.32
CHRNA1-205ENST00000409542 DOCK9Q9BZ29 2069 aa13.07□□□□□ -0.32
CHRNA1-205ENST00000409542 TTC34A8MYJ7 566 aa13.07□□□□□ -0.32
CHRNA1-205ENST00000409542 PIK3R2O00459 728 aa13.07□□□□□ -0.32
CHRNA1-205ENST00000409542 TMEM253P0C7T8 217 aa13.07□□□□□ -0.32
CHRNA1-205ENST00000409542 ATXN8OSP0DMR3 200 aa13.07□□□□□ -0.32
CHRNA1-205ENST00000409542 ABCB4P21439 1286 aa13.07□□□□□ -0.32
CHRNA1-205ENST00000409542 CD38P28907 300 aa13.07□□□□□ -0.32
CHRNA1-205ENST00000409542 EPHA8P29322 1005 aaPredicted RBP13.07□□□□□ -0.32
CHRNA1-205ENST00000409542 HNF1BP35680 557 aa13.07□□□□□ -0.32
CHRNA1-205ENST00000409542 CSKP41240 450 aa13.07□□□□□ -0.32
CHRNA1-205ENST00000409542 CST6Q15828 149 aa13.07□□□□□ -0.32
CHRNA1-205ENST00000409542 HNRNPA1L2Q32P51 320 aaKnown RBP13.07□□□□□ -0.32
CHRNA1-205ENST00000409542 FSCBQ5H9T9 825 aa13.07□□□□□ -0.32
CHRNA1-205ENST00000409542 LRRC69Q6ZNQ3 347 aa13.07□□□□□ -0.32
CHRNA1-205ENST00000409542 KANSL1Q7Z3B3 1105 aa13.07□□□□□ -0.32
CHRNA1-205ENST00000409542 SPATS2Q86XZ4 545 aaKnown RBP13.07□□□□□ -0.32
CHRNA1-205ENST00000409542 IFT20Q8IY31 132 aa13.07□□□□□ -0.32
CHRNA1-205ENST00000409542 AADATQ8N5Z0 425 aa13.07□□□□□ -0.32
CHRNA1-205ENST00000409542 ACTRT1Q8TDG2 376 aa13.07□□□□□ -0.32
CHRNA1-205ENST00000409542 RNF139Q8WU17 664 aa13.07□□□□□ -0.32
CHRNA1-205ENST00000409542 MS4A14Q96JA4 679 aa13.07□□□□□ -0.32
CHRNA1-205ENST00000409542 CALR3Q96L12 384 aaKnown RBP13.07□□□□□ -0.32
CHRNA1-205ENST00000409542 FAM129BQ96TA1 746 aa13.07□□□□□ -0.32
CHRNA1-205ENST00000409542 NRSN2Q9GZP1 204 aa13.07□□□□□ -0.32
CHRNA1-205ENST00000409542 CAAP1Q9H8G2 361 aa13.07□□□□□ -0.32
CHRNA1-205ENST00000409542 GDF3Q9NR23 364 aa13.07□□□□□ -0.32
CHRNA1-205ENST00000409542 RAB20Q9NX57 234 aa13.07□□□□□ -0.32
CHRNA1-205ENST00000409542 TMEM59LQ9UK28 342 aa13.07□□□□□ -0.32
CHRNA1-205ENST00000409542 ADAM21Q9UKJ8 722 aa13.07□□□□□ -0.32
CHRNA1-205ENST00000409542 ZNF462Q96JM2 2506 aa13.06□□□□□ -0.32
CHRNA1-205ENST00000409542 BRINP1O60477 761 aa13.06□□□□□ -0.32
CHRNA1-205ENST00000409542 RNASEH2AO75792 299 aaKnown RBP13.06□□□□□ -0.32
CHRNA1-205ENST00000409542 LATS1O95835 1130 aa13.06□□□□□ -0.32
CHRNA1-205ENST00000409542 IGLV3-27P01718 113 aa13.06□□□□□ -0.32
CHRNA1-205ENST00000409542 C1SP09871 688 aa13.06□□□□□ -0.32
CHRNA1-205ENST00000409542 LCP1P13796 627 aa13.06□□□□□ -0.32
CHRNA1-205ENST00000409542 SLC8A1P32418 973 aa13.06□□□□□ -0.32
CHRNA1-205ENST00000409542 NOP2P46087 812 aaKnown RBP13.06□□□□□ -0.32
CHRNA1-205ENST00000409542 NUMBP49757 651 aa13.06□□□□□ -0.32
CHRNA1-205ENST00000409542 METAP1P53582 386 aa13.06□□□□□ -0.32
CHRNA1-205ENST00000409542 NXPH1P58417 271 aa13.06□□□□□ -0.32
CHRNA1-205ENST00000409542 PPP2CBP62714 309 aa13.06□□□□□ -0.32
CHRNA1-205ENST00000409542 RPS24P62847 133 aaKnown RBP13.06□□□□□ -0.32
CHRNA1-205ENST00000409542 PPP2CAP67775 309 aa13.06□□□□□ -0.32
CHRNA1-205ENST00000409542 KRT39Q6A163 491 aa13.06□□□□□ -0.32
CHRNA1-205ENST00000409542 EIF1ADQ8N9N8 165 aaKnown RBP13.06□□□□□ -0.32
CHRNA1-205ENST00000409542 OR2T34Q8NGX1 318 aa13.06□□□□□ -0.32
CHRNA1-205ENST00000409542 SNIP1Q8TAD8 396 aaKnown RBP13.06□□□□□ -0.32
CHRNA1-205ENST00000409542 CLEC4CQ8WTT0 213 aa13.06□□□□□ -0.32
CHRNA1-205ENST00000409542 LRRC4Q9HBW1 653 aa13.06□□□□□ -0.32
CHRNA1-205ENST00000409542 ABCC13Q9NSE7 274 aa13.06□□□□□ -0.32
CHRNA1-205ENST00000409542 VPS18Q9P253 973 aa13.06□□□□□ -0.32
CHRNA1-205ENST00000409542 SLCO3A1Q9UIG8 710 aa13.06□□□□□ -0.32
CHRNA1-205ENST00000409542 SCML1Q9UN30 329 aa13.06□□□□□ -0.32
CHRNA1-205ENST00000409542 ERVW-1Q9UQF0 538 aa13.06□□□□□ -0.32
CHRNA1-205ENST00000409542 CCDC66A2RUB6 948 aa13.05□□□□□ -0.32
CHRNA1-205ENST00000409542 TLR4O00206 839 aa13.05□□□□□ -0.32
CHRNA1-205ENST00000409542 ACSL4O60488 711 aa13.05□□□□□ -0.32
CHRNA1-205ENST00000409542 RGS7P49802 495 aa13.05□□□□□ -0.32
CHRNA1-205ENST00000409542 DAOAP59103 153 aa13.05□□□□□ -0.32
CHRNA1-205ENST00000409542 ENPEPQ07075 957 aa13.05□□□□□ -0.32
CHRNA1-205ENST00000409542 BST2Q10589 180 aaKnown RBP13.05□□□□□ -0.32
CHRNA1-205ENST00000409542 TCEAL1Q15170 157 aa13.05□□□□□ -0.32
CHRNA1-205ENST00000409542 PKDCCQ504Y2 493 aa13.05□□□□□ -0.32
CHRNA1-205ENST00000409542 MPP7Q5T2T1 576 aa13.05□□□□□ -0.32
CHRNA1-205ENST00000409542 MSANTD2Q6P1R3 559 aa13.05□□□□□ -0.32
CHRNA1-205ENST00000409542 MFN1Q8IWA4 741 aa13.05□□□□□ -0.32
CHRNA1-205ENST00000409542 GSPT2Q8IYD1 628 aaKnown RBP13.05□□□□□ -0.32
CHRNA1-205ENST00000409542 RASGEF1CQ8N431 466 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms