RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 TCAIMQ8N3R3 496 aa17.9■□□□□ 0.46
SMPD4-202ENST00000409031 REEP1Q9H902 201 aa17.9■□□□□ 0.46
SMPD4-202ENST00000409031 CYB561D2O14569 222 aa17.89■□□□□ 0.46
SMPD4-202ENST00000409031 LTA4HP09960 611 aaKnown RBP17.89■□□□□ 0.46
SMPD4-202ENST00000409031 BST2Q10589 180 aaKnown RBP17.89■□□□□ 0.46
SMPD4-202ENST00000409031 PLCL1Q15111 1095 aa17.89■□□□□ 0.46
SMPD4-202ENST00000409031 PRKD1Q15139 912 aaPredicted RBP17.89■□□□□ 0.46
SMPD4-202ENST00000409031 ZNF829Q3KNS6 432 aaPredicted RBP17.89■□□□□ 0.46
SMPD4-202ENST00000409031 CCNYL2Q5T2Q4 361 aa17.89■□□□□ 0.46
SMPD4-202ENST00000409031 ZPBP2Q6X784 338 aa17.89■□□□□ 0.46
SMPD4-202ENST00000409031 ARHGAP36Q6ZRI8 547 aa17.89■□□□□ 0.46
SMPD4-202ENST00000409031 EGFL7Q9UHF1 273 aa17.89■□□□□ 0.46
SMPD4-202ENST00000409031 TTLL13PA6NNM8 815 aa17.89■□□□□ 0.45
SMPD4-202ENST00000409031 H3BSA7 217 aa17.89■□□□□ 0.45
SMPD4-202ENST00000409031 SUPT20HL2P0C7V6 817 aa17.89■□□□□ 0.45
SMPD4-202ENST00000409031 ABCG1P45844 678 aa17.89■□□□□ 0.45
SMPD4-202ENST00000409031 CDK9P50750 372 aaKnown RBP17.89■□□□□ 0.45
SMPD4-202ENST00000409031 EFCAB12Q6NXP0 572 aa17.89■□□□□ 0.45
SMPD4-202ENST00000409031 CENPIQ92674 756 aaPredicted RBP17.89■□□□□ 0.45
SMPD4-202ENST00000409031 ADI1Q9BV57 179 aa17.89■□□□□ 0.45
SMPD4-202ENST00000409031 SENP6Q9GZR1 1112 aaPredicted RBP17.89■□□□□ 0.45
SMPD4-202ENST00000409031 DDX43Q9NXZ2 648 aaKnown RBP17.89■□□□□ 0.45
SMPD4-202ENST00000409031 C2orf81A6NN90 581 aa17.89■□□□□ 0.45
SMPD4-202ENST00000409031 MAGEA10P43363 369 aaPredicted RBP17.89■□□□□ 0.45
SMPD4-202ENST00000409031 SLC6A3Q01959 620 aa17.89■□□□□ 0.45
SMPD4-202ENST00000409031 FNBP1LQ5T0N5 605 aa17.89■□□□□ 0.45
SMPD4-202ENST00000409031 CENPNQ96H22 339 aaPredicted RBP17.89■□□□□ 0.45
SMPD4-202ENST00000409031 INVSQ9Y283 1065 aa17.89■□□□□ 0.45
SMPD4-202ENST00000409031 USP12O75317 370 aa17.89■□□□□ 0.45
SMPD4-202ENST00000409031 PSMD10O75832 226 aa17.89■□□□□ 0.45
SMPD4-202ENST00000409031 TAF6P49848 677 aa17.89■□□□□ 0.45
SMPD4-202ENST00000409031 CCNG1P51959 295 aa17.89■□□□□ 0.45
SMPD4-202ENST00000409031 ZACNQ401N2 412 aa17.89■□□□□ 0.45
SMPD4-202ENST00000409031 UBR7Q8N806 425 aa17.89■□□□□ 0.45
SMPD4-202ENST00000409031 QKIQ96PU8 341 aaKnown RBP eCLIP17.89■□□□□ 0.45
SMPD4-202ENST00000409031 HSD17B14Q9BPX1 270 aa17.89■□□□□ 0.45
SMPD4-202ENST00000409031 COQ10BQ9H8M1 238 aa17.89■□□□□ 0.45
SMPD4-202ENST00000409031 PCDH18Q9HCL0 1135 aa17.89■□□□□ 0.45
SMPD4-202ENST00000409031 POLIQ9UNA4 740 aa17.89■□□□□ 0.45
SMPD4-202ENST00000409031 GAKO14976 1311 aa17.89■□□□□ 0.45
SMPD4-202ENST00000409031 PLA2G6O60733 806 aa17.88■□□□□ 0.45
SMPD4-202ENST00000409031 HOXB6P17509 224 aaKnown RBP17.88■□□□□ 0.45
SMPD4-202ENST00000409031 BLVRAP53004 296 aa17.88■□□□□ 0.45
SMPD4-202ENST00000409031 POTEHQ6S545 545 aa17.88■□□□□ 0.45
SMPD4-202ENST00000409031 PROSER1Q86XN7 944 aa17.88■□□□□ 0.45
SMPD4-202ENST00000409031 OR52K1Q8NGK4 314 aa17.88■□□□□ 0.45
SMPD4-202ENST00000409031 METTL6Q8TCB7 284 aa17.88■□□□□ 0.45
SMPD4-202ENST00000409031 RGS18Q9NS28 235 aa17.88■□□□□ 0.45
SMPD4-202ENST00000409031 UBQLN1Q9UMX0 589 aaKnown RBP17.88■□□□□ 0.45
SMPD4-202ENST00000409031 PLIN3O60664 434 aa17.88■□□□□ 0.45
SMPD4-202ENST00000409031 RAB25P57735 213 aa17.88■□□□□ 0.45
SMPD4-202ENST00000409031 LDLRAP1Q5SW96 308 aa17.88■□□□□ 0.45
SMPD4-202ENST00000409031 NEPROQ6NW34 567 aa17.88■□□□□ 0.45
SMPD4-202ENST00000409031 FAM151AQ8WW52 585 aa17.88■□□□□ 0.45
SMPD4-202ENST00000409031 MUC13Q9H3R2 512 aa17.88■□□□□ 0.45
SMPD4-202ENST00000409031 SERHL2Q9H4I8 314 aa17.88■□□□□ 0.45
SMPD4-202ENST00000409031 ZNF408Q9H9D4 720 aa17.88■□□□□ 0.45
SMPD4-202ENST00000409031 SERHLQ9NQF3 203 aa17.88■□□□□ 0.45
SMPD4-202ENST00000409031 PCDHGC3Q9UN70 934 aa17.88■□□□□ 0.45
SMPD4-202ENST00000409031 PXDNQ92626 1479 aa17.88■□□□□ 0.45
SMPD4-202ENST00000409031 SYNDIG1LA6NDD5 238 aa17.88■□□□□ 0.45
SMPD4-202ENST00000409031 UGT1A9O60656 530 aa17.88■□□□□ 0.45
SMPD4-202ENST00000409031 TXNP10599 105 aaKnown RBP17.88■□□□□ 0.45
SMPD4-202ENST00000409031 UGT1A6P19224 532 aa17.88■□□□□ 0.45
SMPD4-202ENST00000409031 UGT1A1P22309 533 aa17.88■□□□□ 0.45
SMPD4-202ENST00000409031 UGT1A4P22310 534 aa17.88■□□□□ 0.45
SMPD4-202ENST00000409031 UGT1A3P35503 534 aa17.88■□□□□ 0.45
SMPD4-202ENST00000409031 UGT1A5P35504 534 aa17.88■□□□□ 0.45
SMPD4-202ENST00000409031 RPS9P46781 194 aaKnown RBP17.88■□□□□ 0.45
SMPD4-202ENST00000409031 TYW3Q6IPR3 259 aaKnown RBP17.88■□□□□ 0.45
SMPD4-202ENST00000409031 GINS4Q9BRT9 223 aa17.88■□□□□ 0.45
SMPD4-202ENST00000409031 ZNF670Q9BS34 389 aa17.88■□□□□ 0.45
SMPD4-202ENST00000409031 TRMOQ9BU70 441 aa17.88■□□□□ 0.45
SMPD4-202ENST00000409031 UGT1A7Q9HAW7 530 aa17.88■□□□□ 0.45
SMPD4-202ENST00000409031 UGT1A10Q9HAW8 530 aa17.88■□□□□ 0.45
SMPD4-202ENST00000409031 UGT1A8Q9HAW9 530 aa17.88■□□□□ 0.45
SMPD4-202ENST00000409031 FBXO21O94952 628 aa17.88■□□□□ 0.45
SMPD4-202ENST00000409031 PSMB4P28070 264 aa17.88■□□□□ 0.45
SMPD4-202ENST00000409031 COX10Q12887 443 aa17.88■□□□□ 0.45
SMPD4-202ENST00000409031 SPPL2AQ8TCT8 520 aa17.88■□□□□ 0.45
SMPD4-202ENST00000409031 PANX3Q96QZ0 392 aa17.88■□□□□ 0.45
SMPD4-202ENST00000409031 XPR1Q9UBH6 696 aa17.88■□□□□ 0.45
SMPD4-202ENST00000409031 DGKBQ9Y6T7 804 aa17.88■□□□□ 0.45
SMPD4-202ENST00000409031 CCDC189A1A4V9 331 aa17.87■□□□□ 0.45
SMPD4-202ENST00000409031 RIMBP3CA6NJZ7 1639 aa17.87■□□□□ 0.45
SMPD4-202ENST00000409031 RIMBP3BA6NNM3 1639 aa17.87■□□□□ 0.45
SMPD4-202ENST00000409031 CCNE2O96020 404 aa17.87■□□□□ 0.45
SMPD4-202ENST00000409031 CST1P01037 141 aa17.87■□□□□ 0.45
SMPD4-202ENST00000409031 MMP8P22894 467 aa17.87■□□□□ 0.45
SMPD4-202ENST00000409031 HARS2P49590 506 aaKnown RBP17.87■□□□□ 0.45
SMPD4-202ENST00000409031 TRIM32Q13049 653 aa17.87■□□□□ 0.45
SMPD4-202ENST00000409031 NOMO1Q15155 1222 aa17.87■□□□□ 0.45
SMPD4-202ENST00000409031 PGS1Q32NB8 556 aa17.87■□□□□ 0.45
SMPD4-202ENST00000409031 DGKKQ5KSL6 1271 aa17.87■□□□□ 0.45
SMPD4-202ENST00000409031 KCTD8Q6ZWB6 473 aa17.87■□□□□ 0.45
SMPD4-202ENST00000409031 ADAMTS13Q76LX8 1427 aa17.87■□□□□ 0.45
SMPD4-202ENST00000409031 CITED4Q96RK1 184 aa17.87■□□□□ 0.45
SMPD4-202ENST00000409031 PRRG3Q9BZD7 231 aa17.87■□□□□ 0.45
SMPD4-202ENST00000409031 RBM22Q9NW64 420 aaKnown RBP eCLIP17.87■□□□□ 0.456e-9■■■■■ 36.5
SMPD4-202ENST00000409031 ING3Q9NXR8 418 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 322.5 ms