RNA–Protein interactions for RNA: ENST00000409025.5

USP39-202, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5 BASIC

Gene USP39, Length 1,946 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-202ENST00000409025 OAS1P00973 400 aaKnown RBP19.27■□□□□ 0.67
USP39-202ENST00000409025 CORO1AP31146 461 aaKnown RBP19.27■□□□□ 0.67
USP39-202ENST00000409025 CA8P35219 290 aa19.27■□□□□ 0.67
USP39-202ENST00000409025 GP5P40197 560 aa19.27■□□□□ 0.67
USP39-202ENST00000409025 CDH4P55283 916 aa19.27■□□□□ 0.67
USP39-202ENST00000409025 TNK2Q07912 1038 aa19.27■□□□□ 0.67
USP39-202ENST00000409025 GRTP1Q5TC63 336 aa19.27■□□□□ 0.67
USP39-202ENST00000409025 SRLQ86TD4 932 aa19.27■□□□□ 0.67
USP39-202ENST00000409025 ITIH5Q86UX2 942 aa19.27■□□□□ 0.67
USP39-202ENST00000409025 FIBCD1Q8N539 461 aa19.27■□□□□ 0.67
USP39-202ENST00000409025 DNAJC5GQ8N7S2 189 aa19.27■□□□□ 0.67
USP39-202ENST00000409025 GRAMD1AQ96CP6 724 aa19.27■□□□□ 0.67
USP39-202ENST00000409025 IMP4Q96G21 291 aaKnown RBP19.27■□□□□ 0.67
USP39-202ENST00000409025 MRGPRX2Q96LB1 330 aa19.27■□□□□ 0.67
USP39-202ENST00000409025 SRPK1Q96SB4 655 aaKnown RBP19.27■□□□□ 0.67
USP39-202ENST00000409025 KLF16Q9BXK1 252 aaPredicted RBP19.27■□□□□ 0.67
USP39-202ENST00000409025 PITPNM3Q9BZ71 974 aa19.27■□□□□ 0.67
USP39-202ENST00000409025 RNF38Q9H0F5 515 aa19.27■□□□□ 0.67
USP39-202ENST00000409025 VPS11Q9H270 941 aa19.27■□□□□ 0.67
USP39-202ENST00000409025 IL1RAPL1Q9NZN1 696 aa19.27■□□□□ 0.67
USP39-202ENST00000409025 ZFP37Q9Y6Q3 630 aaPredicted RBP19.27■□□□□ 0.67
USP39-202ENST00000409025 PTPRSQ13332 1948 aa19.26■□□□□ 0.67
USP39-202ENST00000409025 C2orf78A6NCI8 922 aa19.26■□□□□ 0.67
USP39-202ENST00000409025 DENND5AQ6IQ26 1287 aa19.26■□□□□ 0.67
USP39-202ENST00000409025 YTHDF3Q7Z739 585 aaKnown RBP19.26■□□□□ 0.67
USP39-202ENST00000409025 FAM111AQ96PZ2 611 aa19.26■□□□□ 0.67
USP39-202ENST00000409025 C12orf65Q9H3J6 166 aaKnown RBP19.26■□□□□ 0.67
USP39-202ENST00000409025 RXFP1Q9HBX9 757 aa19.26■□□□□ 0.67
USP39-202ENST00000409025 GKN1Q9NS71 199 aa19.26■□□□□ 0.67
USP39-202ENST00000409025 PCDH10Q9P2E7 1040 aa19.26■□□□□ 0.67
USP39-202ENST00000409025 PSAT1Q9Y617 370 aa19.26■□□□□ 0.67
USP39-202ENST00000409025 LILRB3O75022 631 aa19.25■□□□□ 0.67
USP39-202ENST00000409025 FGBP02675 491 aa19.25■□□□□ 0.67
USP39-202ENST00000409025 NMBRP28336 390 aa19.25■□□□□ 0.67
USP39-202ENST00000409025 ACVRL1P37023 503 aa19.25■□□□□ 0.67
USP39-202ENST00000409025 ETV4P43268 484 aa19.25■□□□□ 0.67
USP39-202ENST00000409025 WNT3AP56704 352 aa19.25■□□□□ 0.67
USP39-202ENST00000409025 LBRQ14739 615 aaKnown RBP19.25■□□□□ 0.67
USP39-202ENST00000409025 SMAD1Q15797 465 aaKnown RBP19.25■□□□□ 0.67
USP39-202ENST00000409025 PKN3Q6P5Z2 889 aa19.25■□□□□ 0.67
USP39-202ENST00000409025 POTEHQ6S545 545 aa19.25■□□□□ 0.67
USP39-202ENST00000409025 RANBP10Q6VN20 620 aa19.25■□□□□ 0.67
USP39-202ENST00000409025 KCNMB4Q86W47 210 aa19.25■□□□□ 0.67
USP39-202ENST00000409025 PPHLN1Q8NEY8 458 aaKnown RBP19.25■□□□□ 0.67
USP39-202ENST00000409025 ZNF75CPQ92670 426 aaPredicted RBP19.25■□□□□ 0.67
USP39-202ENST00000409025 DDX50Q9BQ39 737 aaKnown RBP19.25■□□□□ 0.67
USP39-202ENST00000409025 ZBP1Q9H171 429 aa19.25■□□□□ 0.67
USP39-202ENST00000409025 MAGEH1Q9H213 219 aa19.25■□□□□ 0.67
USP39-202ENST00000409025 VPS45Q9NRW7 570 aa19.25■□□□□ 0.67
USP39-202ENST00000409025 C20orf96Q9NUD7 363 aaPredicted RBP19.25■□□□□ 0.67
USP39-202ENST00000409025 USP15Q9Y4E8 981 aaPredicted RBP19.25■□□□□ 0.67
USP39-202ENST00000409025 PRAMEF11O60813 436 aa19.25■□□□□ 0.67
USP39-202ENST00000409025 KLKB1P03952 638 aa19.25■□□□□ 0.67
USP39-202ENST00000409025 ITGA2BP08514 1039 aa19.25■□□□□ 0.67
USP39-202ENST00000409025 DHRS4L1P0CG22 281 aa19.25■□□□□ 0.67
USP39-202ENST00000409025 CTSAP10619 480 aa19.25■□□□□ 0.67
USP39-202ENST00000409025 IRF1P10914 325 aa19.25■□□□□ 0.67
USP39-202ENST00000409025 LBX1P52954 281 aa19.25■□□□□ 0.67
USP39-202ENST00000409025 MAXP61244 160 aa19.25■□□□□ 0.67
USP39-202ENST00000409025 SF3A3Q12874 501 aaKnown RBP eCLIP19.25■□□□□ 0.67
USP39-202ENST00000409025 PPIGQ13427 754 aaKnown RBP eCLIP19.25■□□□□ 0.674e-7■■□□□ 13.9
USP39-202ENST00000409025 KDELC1Q6UW63 502 aa19.25■□□□□ 0.67
USP39-202ENST00000409025 FAM47EQ6ZV65 393 aa19.25■□□□□ 0.67
USP39-202ENST00000409025 C16orf59Q7L2K0 433 aa19.25■□□□□ 0.67
USP39-202ENST00000409025 SPATA21Q7Z572 469 aa19.25■□□□□ 0.67
USP39-202ENST00000409025 NDUFAF2Q8N183 169 aa19.25■□□□□ 0.67
USP39-202ENST00000409025 ACMSDQ8TDX5 336 aa19.25■□□□□ 0.67
USP39-202ENST00000409025 PTCD2Q8WV60 388 aaKnown RBP19.25■□□□□ 0.67
USP39-202ENST00000409025 SLC13A1Q9BZW2 595 aa19.25■□□□□ 0.67
USP39-202ENST00000409025 PCMTD2Q9NV79 361 aa19.25■□□□□ 0.67
USP39-202ENST00000409025 PLLPQ9Y342 182 aa19.25■□□□□ 0.67
USP39-202ENST00000409025 ANAPC1Q9H1A4 1944 aa19.24■□□□□ 0.67
USP39-202ENST00000409025 WDR91A4D1P6 747 aa19.24■□□□□ 0.67
USP39-202ENST00000409025 CLDN11O75508 207 aa19.24■□□□□ 0.67
USP39-202ENST00000409025 MBL2P11226 248 aaPredicted RBP19.24■□□□□ 0.67
USP39-202ENST00000409025 CD86P42081 329 aa19.24■□□□□ 0.67
USP39-202ENST00000409025 HTRA4P83105 476 aaPredicted RBP19.24■□□□□ 0.67
USP39-202ENST00000409025 PDE1BQ01064 536 aa19.24■□□□□ 0.67
USP39-202ENST00000409025 GNA12Q03113 381 aa19.24■□□□□ 0.67
USP39-202ENST00000409025 POU6F1Q14863 301 aa19.24■□□□□ 0.67
USP39-202ENST00000409025 PCSK7Q16549 785 aa19.24■□□□□ 0.67
USP39-202ENST00000409025 PABPC1LQ4VXU2 614 aaKnown RBP19.24■□□□□ 0.67
USP39-202ENST00000409025 HSP90AA5PQ58FG0 334 aa19.24■□□□□ 0.67
USP39-202ENST00000409025 ADGRF1Q5T601 910 aa19.24■□□□□ 0.67
USP39-202ENST00000409025 TEDDM1Q5T9Z0 273 aa19.24■□□□□ 0.67
USP39-202ENST00000409025 RNF187Q5TA31 235 aaPredicted RBP19.24■□□□□ 0.67
USP39-202ENST00000409025 TMCO4Q5TGY1 634 aa19.24■□□□□ 0.67
USP39-202ENST00000409025 OTUD6BQ8N6M0 293 aa19.24■□□□□ 0.67
USP39-202ENST00000409025 ZNF599Q96NL3 588 aa19.24■□□□□ 0.67
USP39-202ENST00000409025 ZBED2Q9BTP6 218 aa19.24■□□□□ 0.67
USP39-202ENST00000409025 MRM3Q9HC36 420 aaKnown RBP19.24■□□□□ 0.67
USP39-202ENST00000409025 AGO1Q9UL18 857 aaKnown RBP19.24■□□□□ 0.67
USP39-202ENST00000409025 F11P03951 625 aa19.23■□□□□ 0.67
USP39-202ENST00000409025 CRHR1P34998 444 aa19.23■□□□□ 0.67
USP39-202ENST00000409025 SPRP35270 261 aaPredicted RBP19.23■□□□□ 0.67
USP39-202ENST00000409025 ETFBP38117 255 aa19.23■□□□□ 0.67
USP39-202ENST00000409025 RPS24P62847 133 aaKnown RBP19.23■□□□□ 0.67
USP39-202ENST00000409025 DSC2Q02487 901 aa19.23■□□□□ 0.67
USP39-202ENST00000409025 PDPK2PQ6A1A2 396 aa19.23■□□□□ 0.67
USP39-202ENST00000409025 CDHR3Q6ZTQ4 885 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms