RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 GATA6Q92908 595 aa19.71■□□□□ 0.75
SMARCB1-204ENST00000407422 ARRDC3Q96B67 414 aa19.71■□□□□ 0.75
SMARCB1-204ENST00000407422 BPIFA3Q9BQP9 254 aa19.71■□□□□ 0.75
SMARCB1-204ENST00000407422 RTN4Q9NQC3 1192 aaKnown RBP19.71■□□□□ 0.75
SMARCB1-204ENST00000407422 DNAI1Q9UI46 699 aa19.71■□□□□ 0.75
SMARCB1-204ENST00000407422 FARP1Q9Y4F1 1045 aaPredicted RBP19.71■□□□□ 0.75
SMARCB1-204ENST00000407422 NEUROG3Q9Y4Z2 214 aa19.71■□□□□ 0.75
SMARCB1-204ENST00000407422 LAMA5O15230 3695 aa19.71■□□□□ 0.75
SMARCB1-204ENST00000407422 PTPRBP23467 1997 aa19.7■□□□□ 0.74
SMARCB1-204ENST00000407422 LRIG2O94898 1065 aa19.7■□□□□ 0.74
SMARCB1-204ENST00000407422 PLEKP08567 350 aaPredicted RBP19.7■□□□□ 0.74
SMARCB1-204ENST00000407422 SERPINH1P50454 418 aaKnown RBP19.7■□□□□ 0.74
SMARCB1-204ENST00000407422 CCT8P50990 548 aa19.7■□□□□ 0.74
SMARCB1-204ENST00000407422 RPL7AP62424 266 aaKnown RBP19.7■□□□□ 0.74
SMARCB1-204ENST00000407422 C1QBPQ07021 282 aaKnown RBP19.7■□□□□ 0.74
SMARCB1-204ENST00000407422 SUZ12Q15022 739 aaKnown RBP19.7■□□□□ 0.74
SMARCB1-204ENST00000407422 ARSIQ5FYB1 569 aa19.7■□□□□ 0.74
SMARCB1-204ENST00000407422 RETSATQ6NUM9 610 aa19.7■□□□□ 0.74
SMARCB1-204ENST00000407422 DPY19L3Q6ZPD9 716 aa19.7■□□□□ 0.74
SMARCB1-204ENST00000407422 NLRP14Q86W24 1093 aa19.7■□□□□ 0.74
SMARCB1-204ENST00000407422 GRIN3AQ8TCU5 1115 aa19.7■□□□□ 0.74
SMARCB1-204ENST00000407422 BAP1Q92560 729 aa19.7■□□□□ 0.74
SMARCB1-204ENST00000407422 CCDC114Q96M63 670 aa19.7■□□□□ 0.74
SMARCB1-204ENST00000407422 PLXNB3Q9ULL4 1909 aa19.7■□□□□ 0.74
SMARCB1-204ENST00000407422 A0A1B0GTQ1 180 aa19.69■□□□□ 0.74
SMARCB1-204ENST00000407422 PCDHGA12O60330 932 aa19.69■□□□□ 0.74
SMARCB1-204ENST00000407422 FERP16591 822 aa19.69■□□□□ 0.74
SMARCB1-204ENST00000407422 DNAJC24Q6P3W2 148 aa19.69■□□□□ 0.74
SMARCB1-204ENST00000407422 PRPF39Q86UA1 669 aaKnown RBP19.69■□□□□ 0.74
SMARCB1-204ENST00000407422 TRIM69Q86WT6 500 aa19.69■□□□□ 0.74
SMARCB1-204ENST00000407422 PYROXD2Q8N2H3 581 aa19.69■□□□□ 0.74
SMARCB1-204ENST00000407422 TMIEQ8NEW7 156 aa19.69■□□□□ 0.74
SMARCB1-204ENST00000407422 MCEEQ96PE7 176 aa19.69■□□□□ 0.74
SMARCB1-204ENST00000407422 ELF4Q99607 663 aaPredicted RBP19.69■□□□□ 0.74
SMARCB1-204ENST00000407422 TOR4AQ9NXH8 423 aa19.69■□□□□ 0.74
SMARCB1-204ENST00000407422 TAS2R14Q9NYV8 317 aa19.69■□□□□ 0.74
SMARCB1-204ENST00000407422 TPX2Q9ULW0 747 aaKnown RBP19.69■□□□□ 0.74
SMARCB1-204ENST00000407422 FCF1Q9Y324 198 aaKnown RBP19.69■□□□□ 0.74
SMARCB1-204ENST00000407422 MSRB2Q9Y3D2 182 aa19.69■□□□□ 0.74
SMARCB1-204ENST00000407422 CHD6Q8TD26 2715 aa19.69■□□□□ 0.74
SMARCB1-204ENST00000407422 CCP110O43303 1012 aa19.69■□□□□ 0.74
SMARCB1-204ENST00000407422 CD160O95971 181 aa19.69■□□□□ 0.74
SMARCB1-204ENST00000407422 ATXN1LP0C7T5 689 aaKnown RBP19.69■□□□□ 0.74
SMARCB1-204ENST00000407422 RHOQP17081 205 aa19.69■□□□□ 0.74
SMARCB1-204ENST00000407422 SHBQ15464 509 aa19.69■□□□□ 0.74
SMARCB1-204ENST00000407422 NAPEPLDQ6IQ20 393 aa19.69■□□□□ 0.74
SMARCB1-204ENST00000407422 GATAD2AQ86YP4 633 aa19.69■□□□□ 0.74
SMARCB1-204ENST00000407422 ADAMTS14Q8WXS8 1223 aa19.69■□□□□ 0.74
SMARCB1-204ENST00000407422 NTAN1Q96AB6 310 aa19.69■□□□□ 0.74
SMARCB1-204ENST00000407422 SKA1Q96BD8 255 aa19.69■□□□□ 0.74
SMARCB1-204ENST00000407422 SYT11Q9BT88 431 aa19.69■□□□□ 0.74
SMARCB1-204ENST00000407422 TMEM248Q9NWD8 314 aa19.69■□□□□ 0.74
SMARCB1-204ENST00000407422 IL36AQ9UHA7 158 aa19.69■□□□□ 0.74
SMARCB1-204ENST00000407422 CA5BQ9Y2D0 317 aa19.69■□□□□ 0.74
SMARCB1-204ENST00000407422 CELSR3Q9NYQ7 3312 aa19.69■□□□□ 0.74
SMARCB1-204ENST00000407422 TRPM6Q9BX84 2022 aa19.68■□□□□ 0.74
SMARCB1-204ENST00000407422 GOLGA4Q13439 2230 aaKnown RBP19.68■□□□□ 0.74
SMARCB1-204ENST00000407422 TLR4O00206 839 aa19.68■□□□□ 0.74
SMARCB1-204ENST00000407422 LEFTY1O75610 366 aa19.68■□□□□ 0.74
SMARCB1-204ENST00000407422 PRNPP04156 253 aa19.68■□□□□ 0.74
SMARCB1-204ENST00000407422 RECQLP46063 649 aaPredicted RBP19.68■□□□□ 0.74
SMARCB1-204ENST00000407422 DNA2P51530 1060 aa19.68■□□□□ 0.74
SMARCB1-204ENST00000407422 ZNF143P52747 638 aaPredicted RBP19.68■□□□□ 0.74
SMARCB1-204ENST00000407422 SLC20A2Q08357 652 aa19.68■□□□□ 0.74
SMARCB1-204ENST00000407422 PPP1R15BQ5SWA1 713 aa19.68■□□□□ 0.74
SMARCB1-204ENST00000407422 ACAD10Q6JQN1 1059 aa19.68■□□□□ 0.74
SMARCB1-204ENST00000407422 SLFN11Q7Z7L1 901 aa19.68■□□□□ 0.74
SMARCB1-204ENST00000407422 MCOLN2Q8IZK6 566 aa19.68■□□□□ 0.74
SMARCB1-204ENST00000407422 ARHGEF2Q92974 986 aaKnown RBP19.68■□□□□ 0.74
SMARCB1-204ENST00000407422 TBC1D31Q96DN5 1066 aa19.68■□□□□ 0.74
SMARCB1-204ENST00000407422 NAP1L5Q96NT1 182 aaPredicted RBP19.68■□□□□ 0.74
SMARCB1-204ENST00000407422 CDC6Q99741 560 aa19.68■□□□□ 0.74
SMARCB1-204ENST00000407422 CEP44Q9C0F1 390 aa19.68■□□□□ 0.74
SMARCB1-204ENST00000407422 PREBQ9HCU5 417 aa19.68■□□□□ 0.74
SMARCB1-204ENST00000407422 APOBEC2Q9Y235 224 aaKnown RBP19.68■□□□□ 0.74
SMARCB1-204ENST00000407422 WASF2Q9Y6W5 498 aa19.68■□□□□ 0.74
SMARCB1-204ENST00000407422 ARID1BQ8NFD5 2236 aaPredicted RBP19.68■□□□□ 0.74
SMARCB1-204ENST00000407422 GOLGA8CPA6NN73 597 aa19.67■□□□□ 0.74
SMARCB1-204ENST00000407422 SMTNL1A8MU46 457 aa19.67■□□□□ 0.74
SMARCB1-204ENST00000407422 DFNA5O60443 496 aa19.67■□□□□ 0.74
SMARCB1-204ENST00000407422 RNGTTO60942 597 aaKnown RBP19.67■□□□□ 0.74
SMARCB1-204ENST00000407422 GRK6P43250 576 aa19.67■□□□□ 0.74
SMARCB1-204ENST00000407422 MAPKAPK2P49137 400 aa19.67■□□□□ 0.74
SMARCB1-204ENST00000407422 ZNF165P49910 485 aa19.67■□□□□ 0.74
SMARCB1-204ENST00000407422 NXPH1P58417 271 aa19.67■□□□□ 0.74
SMARCB1-204ENST00000407422 SCAPQ12770 1279 aa19.67■□□□□ 0.74
SMARCB1-204ENST00000407422 SCYL2Q6P3W7 929 aa19.67■□□□□ 0.74
SMARCB1-204ENST00000407422 LEKR1Q6ZMV7 388 aa19.67■□□□□ 0.74
SMARCB1-204ENST00000407422 SPATS2Q86XZ4 545 aaKnown RBP19.67■□□□□ 0.74
SMARCB1-204ENST00000407422 DNAAF5Q86Y56 855 aa19.67■□□□□ 0.74
SMARCB1-204ENST00000407422 KLK6Q92876 244 aa19.67■□□□□ 0.74
SMARCB1-204ENST00000407422 GDF3Q9NR23 364 aa19.67■□□□□ 0.74
SMARCB1-204ENST00000407422 DSPP15924 2871 aaKnown RBP19.66■□□□□ 0.74
SMARCB1-204ENST00000407422 FAM221BA6H8Z2 402 aa19.66■□□□□ 0.74
SMARCB1-204ENST00000407422 LRRC53A6NM62 1247 aa19.66■□□□□ 0.74
SMARCB1-204ENST00000407422 TMCO5BA8MYB1 307 aa19.66■□□□□ 0.74
SMARCB1-204ENST00000407422 CCDC172P0C7W6 258 aa19.66■□□□□ 0.74
SMARCB1-204ENST00000407422 TNFAIP3P21580 790 aa19.66■□□□□ 0.74
SMARCB1-204ENST00000407422 OGDHQ02218 1023 aa19.66■□□□□ 0.74
SMARCB1-204ENST00000407422 CARD16Q5EG05 197 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms