RNA–Protein interactions for RNA: ENST00000401617.6

CLIP4-203, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 5 BASIC

Gene CLIP4, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-203ENST00000401617 FSBPO95073 299 aa12.46□□□□□ -0.41
CLIP4-203ENST00000401617 NMBRP28336 390 aa12.46□□□□□ -0.41
CLIP4-203ENST00000401617 SLC6A4P31645 630 aa12.46□□□□□ -0.41
CLIP4-203ENST00000401617 POLD3Q15054 466 aaPredicted RBP12.46□□□□□ -0.41
CLIP4-203ENST00000401617 SPRED3Q2MJR0 410 aa12.46□□□□□ -0.41
CLIP4-203ENST00000401617 SPOUT1Q5T280 376 aaKnown RBP12.46□□□□□ -0.41
CLIP4-203ENST00000401617 OTOAQ7RTW8 1153 aa12.46□□□□□ -0.41
CLIP4-203ENST00000401617 NDUFAF2Q8N183 169 aa12.46□□□□□ -0.41
CLIP4-203ENST00000401617 IPMKQ8NFU5 416 aa12.46□□□□□ -0.41
CLIP4-203ENST00000401617 PLD4Q96BZ4 506 aa12.46□□□□□ -0.41
CLIP4-203ENST00000401617 ZNF512Q96ME7 567 aaPredicted RBP12.46□□□□□ -0.41
CLIP4-203ENST00000401617 RBBP8Q99708 897 aa12.46□□□□□ -0.41
CLIP4-203ENST00000401617 FICDQ9BVA6 458 aa12.46□□□□□ -0.41
CLIP4-203ENST00000401617 VPS45Q9NRW7 570 aa12.46□□□□□ -0.41
CLIP4-203ENST00000401617 IL1RAPL1Q9NZN1 696 aa12.46□□□□□ -0.41
CLIP4-203ENST00000401617 MAFFQ9ULX9 164 aa12.46□□□□□ -0.41
CLIP4-203ENST00000401617 F5H5T6 163 aa12.46□□□□□ -0.42
CLIP4-203ENST00000401617 H3BNC9 293 aa12.46□□□□□ -0.42
CLIP4-203ENST00000401617 LILRB3O75022 631 aa12.46□□□□□ -0.42
CLIP4-203ENST00000401617 MMP2P08253 660 aa12.46□□□□□ -0.42
CLIP4-203ENST00000401617 CSF2RAP15509 400 aa12.46□□□□□ -0.42
CLIP4-203ENST00000401617 PPP3CCP48454 512 aa12.46□□□□□ -0.42
CLIP4-203ENST00000401617 CSE1LP55060 971 aaKnown RBP12.46□□□□□ -0.42
CLIP4-203ENST00000401617 SLC10A7Q0GE19 358 aa12.46□□□□□ -0.42
CLIP4-203ENST00000401617 BTG3Q14201 252 aaPredicted RBP12.46□□□□□ -0.42
CLIP4-203ENST00000401617 MARC1Q5VT66 337 aa12.46□□□□□ -0.42
CLIP4-203ENST00000401617 TMCO2Q7Z6W1 182 aaPredicted RBP12.46□□□□□ -0.42
CLIP4-203ENST00000401617 TCEAL8Q8IYN2 117 aa12.46□□□□□ -0.42
CLIP4-203ENST00000401617 PSMG2Q969U7 264 aa12.46□□□□□ -0.42
CLIP4-203ENST00000401617 PAWRQ96IZ0 340 aaKnown RBP12.46□□□□□ -0.42
CLIP4-203ENST00000401617 IQCGQ9H095 443 aaKnown RBP12.46□□□□□ -0.42
CLIP4-203ENST00000401617 ACTR5Q9H9F9 607 aaPredicted RBP12.46□□□□□ -0.42
CLIP4-203ENST00000401617 SP110Q9HB58 689 aa12.46□□□□□ -0.42
CLIP4-203ENST00000401617 PDFQ9HBH1 243 aa12.46□□□□□ -0.42
CLIP4-203ENST00000401617 CYP4F11Q9HBI6 524 aa12.46□□□□□ -0.42
CLIP4-203ENST00000401617 PCMTD2Q9NV79 361 aa12.46□□□□□ -0.42
CLIP4-203ENST00000401617 TRPM5Q9NZQ8 1165 aa12.46□□□□□ -0.42
CLIP4-203ENST00000401617 PRAMEF11O60813 436 aa12.45□□□□□ -0.42
CLIP4-203ENST00000401617 MAGEA9P43362 315 aa12.45□□□□□ -0.42
CLIP4-203ENST00000401617 ALDH1A3P47895 512 aa12.45□□□□□ -0.42
CLIP4-203ENST00000401617 LIMK2P53671 638 aa12.45□□□□□ -0.42
CLIP4-203ENST00000401617 WNT3AP56704 352 aa12.45□□□□□ -0.42
CLIP4-203ENST00000401617 ACTN3Q08043 901 aaPredicted RBP12.45□□□□□ -0.42
CLIP4-203ENST00000401617 SF3A3Q12874 501 aaKnown RBP eCLIP12.45□□□□□ -0.42
CLIP4-203ENST00000401617 MSLNQ13421 630 aaPredicted RBP12.45□□□□□ -0.42
CLIP4-203ENST00000401617 PDE1CQ14123 709 aaPredicted RBP12.45□□□□□ -0.42
CLIP4-203ENST00000401617 IHHQ14623 411 aa12.45□□□□□ -0.42
CLIP4-203ENST00000401617 DBN1Q16643 649 aa12.45□□□□□ -0.42
CLIP4-203ENST00000401617 INSCQ1MX18 579 aa12.45□□□□□ -0.42
CLIP4-203ENST00000401617 GALNTL6Q49A17 601 aa12.45□□□□□ -0.42
CLIP4-203ENST00000401617 PDPK2PQ6A1A2 396 aa12.45□□□□□ -0.42
CLIP4-203ENST00000401617 KYAT3Q6YP21 454 aaKnown RBP12.45□□□□□ -0.42
CLIP4-203ENST00000401617 KCNMB4Q86W47 210 aa12.45□□□□□ -0.42
CLIP4-203ENST00000401617 CIR1Q86X95 450 aaPredicted RBP12.45□□□□□ -0.42
CLIP4-203ENST00000401617 LGI2Q8N0V4 545 aa12.45□□□□□ -0.42
CLIP4-203ENST00000401617 CCDC63Q8NA47 563 aa12.45□□□□□ -0.42
CLIP4-203ENST00000401617 ZNF778Q96MU6 729 aa12.45□□□□□ -0.42
CLIP4-203ENST00000401617 AGAP2Q99490 1192 aa12.45□□□□□ -0.42
CLIP4-203ENST00000401617 KLF16Q9BXK1 252 aaPredicted RBP12.45□□□□□ -0.42
CLIP4-203ENST00000401617 SLC13A1Q9BZW2 595 aa12.45□□□□□ -0.42
CLIP4-203ENST00000401617 NT5MQ9NPB1 228 aa12.45□□□□□ -0.42
CLIP4-203ENST00000401617 ABCF3Q9NUQ8 709 aa12.45□□□□□ -0.42
CLIP4-203ENST00000401617 HAUS2Q9NVX0 235 aa12.45□□□□□ -0.42
CLIP4-203ENST00000401617 SIRPGQ9P1W8 387 aa12.45□□□□□ -0.42
CLIP4-203ENST00000401617 KLHL14Q9P2G3 628 aa12.45□□□□□ -0.42
CLIP4-203ENST00000401617 WDR91A4D1P6 747 aa12.45□□□□□ -0.42
CLIP4-203ENST00000401617 TPP1O14773 563 aa12.45□□□□□ -0.42
CLIP4-203ENST00000401617 BIRC5O15392 142 aa12.45□□□□□ -0.42
CLIP4-203ENST00000401617 SIN3BO75182 1162 aa12.45□□□□□ -0.42
CLIP4-203ENST00000401617 PMPCBO75439 489 aa12.45□□□□□ -0.42
CLIP4-203ENST00000401617 STC2O76061 302 aa12.45□□□□□ -0.42
CLIP4-203ENST00000401617 BAIAP3O94812 1187 aa12.45□□□□□ -0.42
CLIP4-203ENST00000401617 GSRP00390 522 aa12.45□□□□□ -0.42
CLIP4-203ENST00000401617 KLKB1P03952 638 aa12.45□□□□□ -0.42
CLIP4-203ENST00000401617 URODP06132 367 aa12.45□□□□□ -0.42
CLIP4-203ENST00000401617 GSTA1P08263 222 aa12.45□□□□□ -0.42
CLIP4-203ENST00000401617 OR1E1P30953 314 aa12.45□□□□□ -0.42
CLIP4-203ENST00000401617 SPRP35270 261 aaPredicted RBP12.45□□□□□ -0.42
CLIP4-203ENST00000401617 ACVRL1P37023 503 aa12.45□□□□□ -0.42
CLIP4-203ENST00000401617 SLC11A2P49281 568 aa12.45□□□□□ -0.42
CLIP4-203ENST00000401617 HARS2P49590 506 aaKnown RBP12.45□□□□□ -0.42
CLIP4-203ENST00000401617 CSRP3P50461 194 aa12.45□□□□□ -0.42
CLIP4-203ENST00000401617 HSP90AA5PQ58FG0 334 aa12.45□□□□□ -0.42
CLIP4-203ENST00000401617 FAM117BQ6P1L5 589 aa12.45□□□□□ -0.42
CLIP4-203ENST00000401617 CNTN4Q8IWV2 1026 aa12.45□□□□□ -0.42
CLIP4-203ENST00000401617 PGBD5Q8N414 524 aa12.45□□□□□ -0.42
CLIP4-203ENST00000401617 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.45□□□□□ -0.42
CLIP4-203ENST00000401617 ARRDC2Q8TBH0 407 aa12.45□□□□□ -0.42
CLIP4-203ENST00000401617 RAB3IL1Q8TBN0 382 aa12.45□□□□□ -0.42
CLIP4-203ENST00000401617 ZNF398Q8TD17 642 aa12.45□□□□□ -0.42
CLIP4-203ENST00000401617 ZNF599Q96NL3 588 aa12.45□□□□□ -0.42
CLIP4-203ENST00000401617 KLHL5Q96PQ7 755 aa12.45□□□□□ -0.42
CLIP4-203ENST00000401617 TREX1Q9NSU2 369 aa12.45□□□□□ -0.42
CLIP4-203ENST00000401617 TXNDC16Q9P2K2 825 aa12.45□□□□□ -0.42
CLIP4-203ENST00000401617 TCAF1Q9Y4C2 921 aa12.45□□□□□ -0.42
CLIP4-203ENST00000401617 NEBLO76041 1014 aa12.44□□□□□ -0.42
CLIP4-203ENST00000401617 TGDSO95455 350 aa12.44□□□□□ -0.42
CLIP4-203ENST00000401617 ARCN1P48444 511 aaKnown RBP12.44□□□□□ -0.42
CLIP4-203ENST00000401617 CDH4P55283 916 aa12.44□□□□□ -0.42
CLIP4-203ENST00000401617 CCDC15Q0P6D6 951 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms