RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 MUC13Q9H3R2 512 aa5.96□□□□□ -1.46
PTPRD-206ENST00000397617 DNMT3LQ9UJW3 386 aa5.96□□□□□ -1.46
PTPRD-206ENST00000397617 ZCWPW2A0A1B0GU75 182 aa5.96□□□□□ -1.46
PTPRD-206ENST00000397617 NPHS1O60500 1241 aa5.96□□□□□ -1.46
PTPRD-206ENST00000397617 VPS4BO75351 444 aa5.96□□□□□ -1.46
PTPRD-206ENST00000397617 RFPL1O75677 317 aa5.96□□□□□ -1.46
PTPRD-206ENST00000397617 BPGMP07738 259 aa5.96□□□□□ -1.46
PTPRD-206ENST00000397617 KRT16P08779 473 aa5.96□□□□□ -1.46
PTPRD-206ENST00000397617 FAM83EQ2M2I3 478 aa5.96□□□□□ -1.46
PTPRD-206ENST00000397617 C6orf163Q5TEZ5 329 aa5.96□□□□□ -1.46
PTPRD-206ENST00000397617 ZNF567Q8N184 647 aa5.96□□□□□ -1.46
PTPRD-206ENST00000397617 BRSK1Q8TDC3 778 aa5.96□□□□□ -1.46
PTPRD-206ENST00000397617 CMTM5Q96DZ9 223 aa5.96□□□□□ -1.46
PTPRD-206ENST00000397617 TREX1Q9NSU2 369 aa5.96□□□□□ -1.46
PTPRD-206ENST00000397617 CROCCQ5TZA2 2017 aa5.96□□□□□ -1.46
PTPRD-206ENST00000397617 DOCK6Q96HP0 2047 aa5.96□□□□□ -1.46
PTPRD-206ENST00000397617 MTMR11A4FU01 709 aa5.96□□□□□ -1.46
PTPRD-206ENST00000397617 CRTAMO95727 393 aa5.96□□□□□ -1.46
PTPRD-206ENST00000397617 GOT1P17174 413 aa5.96□□□□□ -1.46
PTPRD-206ENST00000397617 GCKP35557 465 aa5.96□□□□□ -1.46
PTPRD-206ENST00000397617 SLC7A9P82251 487 aa5.96□□□□□ -1.46
PTPRD-206ENST00000397617 CTXN3Q4LDR2 81 aa5.96□□□□□ -1.46
PTPRD-206ENST00000397617 OGFOD2Q6N063 350 aa5.96□□□□□ -1.46
PTPRD-206ENST00000397617 TAC4Q86UU9 113 aa5.96□□□□□ -1.46
PTPRD-206ENST00000397617 CLP1Q92989 425 aaKnown RBP5.96□□□□□ -1.46
PTPRD-206ENST00000397617 OBP2AQ9NY56 170 aa5.96□□□□□ -1.46
PTPRD-206ENST00000397617 HEY1Q9Y5J3 304 aa5.96□□□□□ -1.46
PTPRD-206ENST00000397617 C15orf38-AP3S2A0A0A6YYH1 394 aa5.96□□□□□ -1.46
PTPRD-206ENST00000397617 MATN2O00339 956 aa5.96□□□□□ -1.46
PTPRD-206ENST00000397617 HDAC3O15379 428 aa5.96□□□□□ -1.46
PTPRD-206ENST00000397617 ITGA2BP08514 1039 aa5.96□□□□□ -1.46
PTPRD-206ENST00000397617 BEX3Q00994 111 aa5.96□□□□□ -1.46
PTPRD-206ENST00000397617 RAD51Q06609 339 aa5.96□□□□□ -1.46
PTPRD-206ENST00000397617 ITGA9Q13797 1035 aa5.96□□□□□ -1.46
PTPRD-206ENST00000397617 NEPROQ6NW34 567 aa5.96□□□□□ -1.46
PTPRD-206ENST00000397617 PSRC1Q6PGN9 363 aaPredicted RBP5.96□□□□□ -1.46
PTPRD-206ENST00000397617 PACS1Q6VY07 963 aa5.96□□□□□ -1.46
PTPRD-206ENST00000397617 ARPINQ7Z6K5 226 aa5.96□□□□□ -1.46
PTPRD-206ENST00000397617 MYO1HQ8N1T3 1032 aa5.96□□□□□ -1.46
PTPRD-206ENST00000397617 EPS8L3Q8TE67 593 aaKnown RBP5.96□□□□□ -1.46
PTPRD-206ENST00000397617 IGSF21Q96ID5 467 aa5.96□□□□□ -1.46
PTPRD-206ENST00000397617 ZNF558Q96NG5 402 aa5.96□□□□□ -1.46
PTPRD-206ENST00000397617 KCTD15Q96SI1 283 aaPredicted RBP5.96□□□□□ -1.46
PTPRD-206ENST00000397617 NUSAP1Q9BXS6 441 aaKnown RBP5.96□□□□□ -1.46
PTPRD-206ENST00000397617 R3HDMLQ9H3Y0 253 aa5.96□□□□□ -1.46
PTPRD-206ENST00000397617 DNAAF2Q9NVR5 837 aaKnown RBP5.96□□□□□ -1.46
PTPRD-206ENST00000397617 SPG21Q9NZD8 308 aa5.96□□□□□ -1.46
PTPRD-206ENST00000397617 STOML1Q9UBI4 398 aa5.96□□□□□ -1.46
PTPRD-206ENST00000397617 RSPH14Q9UHP6 348 aa5.96□□□□□ -1.46
PTPRD-206ENST00000397617 FBXO5Q9UKT4 447 aa5.96□□□□□ -1.46
PTPRD-206ENST00000397617 NUP214P35658 2090 aaPredicted RBP5.96□□□□□ -1.46
PTPRD-206ENST00000397617 PRAMEF11O60813 436 aa5.96□□□□□ -1.46
PTPRD-206ENST00000397617 CCND1P24385 295 aa5.96□□□□□ -1.46
PTPRD-206ENST00000397617 MAGEA8P43361 318 aa5.96□□□□□ -1.46
PTPRD-206ENST00000397617 CCL14Q16627 93 aa5.96□□□□□ -1.46
PTPRD-206ENST00000397617 LYPLAL1Q5VWZ2 237 aa5.96□□□□□ -1.46
PTPRD-206ENST00000397617 SCYL2Q6P3W7 929 aa5.96□□□□□ -1.46
PTPRD-206ENST00000397617 ASRGL1Q7L266 308 aa5.96□□□□□ -1.46
PTPRD-206ENST00000397617 SLC39A11Q8N1S5 342 aa5.96□□□□□ -1.46
PTPRD-206ENST00000397617 COLGALT1Q8NBJ5 622 aa5.96□□□□□ -1.46
PTPRD-206ENST00000397617 DNAJB8Q8NHS0 232 aa5.96□□□□□ -1.46
PTPRD-206ENST00000397617 BTBD6Q96KE9 485 aa5.96□□□□□ -1.46
PTPRD-206ENST00000397617 MGME1Q9BQP7 344 aa5.96□□□□□ -1.46
PTPRD-206ENST00000397617 APPL1Q9UKG1 709 aa5.96□□□□□ -1.46
PTPRD-206ENST00000397617 TLK1Q9UKI8 766 aa5.96□□□□□ -1.46
PTPRD-206ENST00000397617 LRFN2Q9ULH4 789 aa5.96□□□□□ -1.46
PTPRD-206ENST00000397617 SCN8AQ9UQD0 1980 aa5.96□□□□□ -1.46
PTPRD-206ENST00000397617 AGAP14A8MT82 685 aa5.95□□□□□ -1.46
PTPRD-206ENST00000397617 NRP1O14786 923 aa5.95□□□□□ -1.46
PTPRD-206ENST00000397617 NPC1O15118 1278 aa5.95□□□□□ -1.46
PTPRD-206ENST00000397617 DNAJA2O60884 412 aa5.95□□□□□ -1.46
PTPRD-206ENST00000397617 GALTP07902 379 aa5.95□□□□□ -1.46
PTPRD-206ENST00000397617 PSMD5Q16401 504 aa5.95□□□□□ -1.46
PTPRD-206ENST00000397617 CDR2LQ86X02 465 aaPredicted RBP5.95□□□□□ -1.46
PTPRD-206ENST00000397617 ARHGAP12Q8IWW6 846 aa5.95□□□□□ -1.46
PTPRD-206ENST00000397617 OSBPL7Q9BZF2 842 aa5.95□□□□□ -1.46
PTPRD-206ENST00000397617 CEP44Q9C0F1 390 aa5.95□□□□□ -1.46
PTPRD-206ENST00000397617 TJP2Q9UDY2 1190 aa5.95□□□□□ -1.46
PTPRD-206ENST00000397617 LSM7Q9UK45 103 aaKnown RBP5.95□□□□□ -1.46
PTPRD-206ENST00000397617 NEU3Q9UQ49 428 aa5.95□□□□□ -1.46
PTPRD-206ENST00000397617 PABPN1LA6NDY0 278 aaKnown RBP5.95□□□□□ -1.46
PTPRD-206ENST00000397617 INHAP05111 366 aa5.95□□□□□ -1.46
PTPRD-206ENST00000397617 AKAP5P24588 427 aa5.95□□□□□ -1.46
PTPRD-206ENST00000397617 LMO2P25791 158 aa5.95□□□□□ -1.46
PTPRD-206ENST00000397617 KCNT1Q5JUK3 1230 aa5.95□□□□□ -1.46
PTPRD-206ENST00000397617 ZNF618Q5T7W0 954 aa5.95□□□□□ -1.46
PTPRD-206ENST00000397617 CARNMT1Q8N4J0 409 aa5.95□□□□□ -1.46
PTPRD-206ENST00000397617 ZNF75CPQ92670 426 aaPredicted RBP5.95□□□□□ -1.46
PTPRD-206ENST00000397617 E2F7Q96AV8 911 aa5.95□□□□□ -1.46
PTPRD-206ENST00000397617 MED10Q9BTT4 135 aa5.95□□□□□ -1.46
PTPRD-206ENST00000397617 SHCBP1LQ9BZQ2 653 aa5.95□□□□□ -1.46
PTPRD-206ENST00000397617 DCLRE1BQ9H816 532 aa5.95□□□□□ -1.46
PTPRD-206ENST00000397617 MARK1Q9P0L2 795 aa5.95□□□□□ -1.46
PTPRD-206ENST00000397617 TTLL3Q9Y4R7 772 aa5.95□□□□□ -1.46
PTPRD-206ENST00000397617 HES2Q9Y543 173 aa5.95□□□□□ -1.46
PTPRD-206ENST00000397617 PPEF2O14830 753 aa5.95□□□□□ -1.46
PTPRD-206ENST00000397617 SERPINA6P08185 405 aa5.95□□□□□ -1.46
PTPRD-206ENST00000397617 ADORA2BP29275 332 aa5.95□□□□□ -1.46
PTPRD-206ENST00000397617 TYK2P29597 1187 aa5.95□□□□□ -1.46
PTPRD-206ENST00000397617 ATP1A2P50993 1020 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms