RNA–Protein interactions for RNA: ENST00000397163.7

CAPN3-206, Transcript of calpain 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CAPN3, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-206ENST00000397163 MID2Q9UJV3 735 aa9.32□□□□□ -0.92
CAPN3-206ENST00000397163 C7orf72A4D263 438 aa9.31□□□□□ -0.92
CAPN3-206ENST00000397163 TK2O00142 265 aa9.31□□□□□ -0.92
CAPN3-206ENST00000397163 H6PDO95479 791 aa9.31□□□□□ -0.92
CAPN3-206ENST00000397163 ALDH2P05091 517 aa9.31□□□□□ -0.92
CAPN3-206ENST00000397163 MPOP05164 745 aa9.31□□□□□ -0.92
CAPN3-206ENST00000397163 CD247P20963 164 aa9.31□□□□□ -0.92
CAPN3-206ENST00000397163 ETFBP38117 255 aa9.31□□□□□ -0.92
CAPN3-206ENST00000397163 PHKA2P46019 1235 aa9.31□□□□□ -0.92
CAPN3-206ENST00000397163 OAZ1P54368 228 aa9.31□□□□□ -0.92
CAPN3-206ENST00000397163 NAGLUP54802 743 aa9.31□□□□□ -0.92
CAPN3-206ENST00000397163 PRAMEP78395 509 aa9.31□□□□□ -0.92
CAPN3-206ENST00000397163 CYP2A13Q16696 494 aa9.31□□□□□ -0.92
CAPN3-206ENST00000397163 SMYD5Q6GMV2 418 aa9.31□□□□□ -0.92
CAPN3-206ENST00000397163 PID1Q7Z2X4 250 aa9.31□□□□□ -0.92
CAPN3-206ENST00000397163 ACOT1Q86TX2 421 aa9.31□□□□□ -0.92
CAPN3-206ENST00000397163 CHERPQ8IWX8 916 aaKnown RBP9.31□□□□□ -0.92
CAPN3-206ENST00000397163 LZTR1Q8N653 840 aa9.31□□□□□ -0.92
CAPN3-206ENST00000397163 CCDC185Q8N715 623 aa9.31□□□□□ -0.92
CAPN3-206ENST00000397163 DNAAF3Q8N9W5 541 aa9.31□□□□□ -0.92
CAPN3-206ENST00000397163 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.31□□□□□ -0.92
CAPN3-206ENST00000397163 TRAPPC12Q8WVT3 735 aa9.31□□□□□ -0.92
CAPN3-206ENST00000397163 SEPT1Q8WYJ6 367 aa9.31□□□□□ -0.92
CAPN3-206ENST00000397163 ACE2Q9BYF1 805 aaPredicted RBP9.31□□□□□ -0.92
CAPN3-206ENST00000397163 LRRC40Q9H9A6 602 aa9.31□□□□□ -0.92
CAPN3-206ENST00000397163 OXSMQ9NWU1 459 aa9.31□□□□□ -0.92
CAPN3-206ENST00000397163 KIAA1257Q9ULG3 409 aa9.31□□□□□ -0.92
CAPN3-206ENST00000397163 TMED5Q9Y3A6 229 aa9.31□□□□□ -0.92
CAPN3-206ENST00000397163 RNF11Q9Y3C5 154 aa9.31□□□□□ -0.92
CAPN3-206ENST00000397163 HES2Q9Y543 173 aa9.31□□□□□ -0.92
CAPN3-206ENST00000397163 AP4S1Q9Y587 144 aa9.31□□□□□ -0.92
CAPN3-206ENST00000397163 MYO18AQ92614 2054 aaKnown RBP9.31□□□□□ -0.92
CAPN3-206ENST00000397163 HACD1B0YJ81 288 aa9.31□□□□□ -0.92
CAPN3-206ENST00000397163 ZNF487B1APH4 448 aa9.31□□□□□ -0.92
CAPN3-206ENST00000397163 MFSD11O43934 449 aa9.31□□□□□ -0.92
CAPN3-206ENST00000397163 ZNF26P17031 533 aaPredicted RBP9.31□□□□□ -0.92
CAPN3-206ENST00000397163 HOXD11P31277 338 aaPredicted RBP9.31□□□□□ -0.92
CAPN3-206ENST00000397163 GLRBP48167 497 aa9.31□□□□□ -0.92
CAPN3-206ENST00000397163 CDK9P50750 372 aaKnown RBP9.31□□□□□ -0.92
CAPN3-206ENST00000397163 PRKAA1Q13131 559 aa9.31□□□□□ -0.92
CAPN3-206ENST00000397163 DCDC5Q6ZRR9 648 aa9.31□□□□□ -0.92
CAPN3-206ENST00000397163 TTC30AQ86WT1 665 aa9.31□□□□□ -0.92
CAPN3-206ENST00000397163 MYO1HQ8N1T3 1032 aa9.31□□□□□ -0.92
CAPN3-206ENST00000397163 PCDH20Q8N6Y1 951 aaKnown RBP9.31□□□□□ -0.92
CAPN3-206ENST00000397163 FAM167AQ96KS9 214 aa9.31□□□□□ -0.92
CAPN3-206ENST00000397163 FZD8Q9H461 694 aa9.31□□□□□ -0.92
CAPN3-206ENST00000397163 EIF2B3Q9NR50 452 aaKnown RBP9.31□□□□□ -0.92
CAPN3-206ENST00000397163 TLK1Q9UKI8 766 aa9.31□□□□□ -0.92
CAPN3-206ENST00000397163 SLC39A10Q9ULF5 831 aa9.31□□□□□ -0.92
CAPN3-206ENST00000397163 MYRFQ9Y2G1 1151 aa9.31□□□□□ -0.92
CAPN3-206ENST00000397163 SNX9Q9Y5X1 595 aa9.31□□□□□ -0.92
CAPN3-206ENST00000397163 TRIM38O00635 465 aa9.31□□□□□ -0.92
CAPN3-206ENST00000397163 ACOT8O14734 319 aa9.31□□□□□ -0.92
CAPN3-206ENST00000397163 GRID2O43424 1007 aa9.31□□□□□ -0.92
CAPN3-206ENST00000397163 SEC24DO94855 1032 aaPredicted RBP9.31□□□□□ -0.92
CAPN3-206ENST00000397163 IDO1P14902 403 aa9.31□□□□□ -0.92
CAPN3-206ENST00000397163 NAT1P18440 290 aa9.31□□□□□ -0.92
CAPN3-206ENST00000397163 MAGEA12P43365 314 aa9.31□□□□□ -0.92
CAPN3-206ENST00000397163 SMUG1Q53HV7 270 aa9.31□□□□□ -0.92
CAPN3-206ENST00000397163 LIPMQ5VYY2 423 aa9.31□□□□□ -0.92
CAPN3-206ENST00000397163 NANOGP8Q6NSW7 305 aa9.31□□□□□ -0.92
CAPN3-206ENST00000397163 FAM131BQ86XD5 332 aa9.31□□□□□ -0.92
CAPN3-206ENST00000397163 C7orf31Q8N865 590 aa9.31□□□□□ -0.92
CAPN3-206ENST00000397163 CLEC4CQ8WTT0 213 aa9.31□□□□□ -0.92
CAPN3-206ENST00000397163 LRTOMTQ8WZ04 291 aa9.31□□□□□ -0.92
CAPN3-206ENST00000397163 DCPSQ96C86 337 aaKnown RBP9.31□□□□□ -0.92
CAPN3-206ENST00000397163 THAP11Q96EK4 314 aa9.31□□□□□ -0.92
CAPN3-206ENST00000397163 RMND5BQ96G75 393 aaPredicted RBP9.31□□□□□ -0.92
CAPN3-206ENST00000397163 PPP1R16BQ96T49 567 aa9.31□□□□□ -0.92
CAPN3-206ENST00000397163 OSBPL11Q9BXB4 747 aa9.31□□□□□ -0.92
CAPN3-206ENST00000397163 DRC3Q9H069 523 aa9.31□□□□□ -0.92
CAPN3-206ENST00000397163 MINDY3Q9H8M7 445 aa9.31□□□□□ -0.92
CAPN3-206ENST00000397163 ZBTB26Q9HCK0 441 aa9.31□□□□□ -0.92
CAPN3-206ENST00000397163 BFARQ9NZS9 450 aa9.31□□□□□ -0.92
CAPN3-206ENST00000397163 KIAA1522Q9P206 1035 aaPredicted RBP9.31□□□□□ -0.92
CAPN3-206ENST00000397163 ZDHHC2Q9UIJ5 367 aa9.31□□□□□ -0.92
CAPN3-206ENST00000397163 TNFSF13BQ9Y275 285 aa9.31□□□□□ -0.92
CAPN3-206ENST00000397163 FADS3Q9Y5Q0 445 aa9.31□□□□□ -0.92
CAPN3-206ENST00000397163 SNX13Q9Y5W8 968 aa9.31□□□□□ -0.92
CAPN3-206ENST00000397163 PSMD12O00232 456 aaPredicted RBP9.3□□□□□ -0.92
CAPN3-206ENST00000397163 TADA2AO75478 443 aa9.3□□□□□ -0.92
CAPN3-206ENST00000397163 CDH3P22223 829 aa9.3□□□□□ -0.92
CAPN3-206ENST00000397163 CLCN3P51790 818 aa9.3□□□□□ -0.92
CAPN3-206ENST00000397163 TSPY1Q01534 308 aa9.3□□□□□ -0.92
CAPN3-206ENST00000397163 INCA1Q0VD86 236 aa9.3□□□□□ -0.92
CAPN3-206ENST00000397163 BNIP3Q12983 259 aa9.3□□□□□ -0.92
CAPN3-206ENST00000397163 DPYSQ14117 519 aa9.3□□□□□ -0.92
CAPN3-206ENST00000397163 IKBKEQ14164 716 aa9.3□□□□□ -0.92
CAPN3-206ENST00000397163 TMEM132DQ14C87 1099 aa9.3□□□□□ -0.92
CAPN3-206ENST00000397163 HERC3Q15034 1050 aa9.3□□□□□ -0.92
CAPN3-206ENST00000397163 CPSF7Q8N684 471 aaKnown RBP9.3□□□□□ -0.92
CAPN3-206ENST00000397163 PCDHAC1Q9H158 963 aa9.3□□□□□ -0.92
CAPN3-206ENST00000397163 KLHL8Q9P2G9 620 aaPredicted RBP9.3□□□□□ -0.92
CAPN3-206ENST00000397163 SYNJ2BP-COX16A0A087WUM0 186 aa9.3□□□□□ -0.92
CAPN3-206ENST00000397163 A0A1W2PPW3 197 aa9.3□□□□□ -0.92
CAPN3-206ENST00000397163 GOLGA8TH3BQL2 631 aa9.3□□□□□ -0.92
CAPN3-206ENST00000397163 KCNK1O00180 336 aa9.3□□□□□ -0.92
CAPN3-206ENST00000397163 PLOD2O00469 737 aa9.3□□□□□ -0.92
CAPN3-206ENST00000397163 SLC22A2O15244 555 aa9.3□□□□□ -0.92
CAPN3-206ENST00000397163 TIMM44O43615 452 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms