RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 NEU3Q9UQ49 428 aa13.55□□□□□ -0.24
SEC13-209ENST00000397117 PCNX2A6NKB5 2137 aa13.54□□□□□ -0.24
SEC13-209ENST00000397117 IGLV3-10A0A075B6K4 115 aa13.54□□□□□ -0.24
SEC13-209ENST00000397117 DRGXA6NNA5 263 aa13.54□□□□□ -0.24
SEC13-209ENST00000397117 TUBBP07437 444 aa13.54□□□□□ -0.24
SEC13-209ENST00000397117 MX2P20592 715 aa13.54□□□□□ -0.24
SEC13-209ENST00000397117 SLC6A4P31645 630 aa13.54□□□□□ -0.24
SEC13-209ENST00000397117 PTGIRP43119 386 aa13.54□□□□□ -0.24
SEC13-209ENST00000397117 ZXDBP98169 803 aa13.54□□□□□ -0.24
SEC13-209ENST00000397117 GUCY2DQ02846 1103 aa13.54□□□□□ -0.24
SEC13-209ENST00000397117 SLC10A2Q12908 348 aaPredicted RBP13.54□□□□□ -0.24
SEC13-209ENST00000397117 HTR3DQ70Z44 454 aa13.54□□□□□ -0.24
SEC13-209ENST00000397117 IFT20Q8IY31 132 aa13.54□□□□□ -0.24
SEC13-209ENST00000397117 ZNF683Q8IZ20 524 aa13.54□□□□□ -0.24
SEC13-209ENST00000397117 CCDC89Q8N998 374 aa13.54□□□□□ -0.24
SEC13-209ENST00000397117 CCNYQ8ND76 341 aa13.54□□□□□ -0.24
SEC13-209ENST00000397117 RPLP0P6Q8NHW5 317 aa13.54□□□□□ -0.24
SEC13-209ENST00000397117 SH3RF2Q8TEC5 729 aa13.54□□□□□ -0.24
SEC13-209ENST00000397117 TFB1MQ8WVM0 346 aaKnown RBP13.54□□□□□ -0.24
SEC13-209ENST00000397117 ANKRD7Q92527 254 aa13.54□□□□□ -0.24
SEC13-209ENST00000397117 IGSF8Q969P0 613 aa13.54□□□□□ -0.24
SEC13-209ENST00000397117 WBP2Q969T9 261 aa13.54□□□□□ -0.24
SEC13-209ENST00000397117 ECT2Q9H8V3 914 aa13.54□□□□□ -0.24
SEC13-209ENST00000397117 STOML2Q9UJZ1 356 aa13.54□□□□□ -0.24
SEC13-209ENST00000397117 WASF3Q9UPY6 502 aa13.54□□□□□ -0.24
SEC13-209ENST00000397117 ASCC3Q8N3C0 2202 aaKnown RBP13.54□□□□□ -0.24
SEC13-209ENST00000397117 TYW5A2RUC4 315 aaKnown RBP13.53□□□□□ -0.24
SEC13-209ENST00000397117 CFAP69A5D8W1 941 aa13.53□□□□□ -0.24
SEC13-209ENST00000397117 WASH4PA8MWX3 477 aa13.53□□□□□ -0.24
SEC13-209ENST00000397117 HACD1B0YJ81 288 aa13.53□□□□□ -0.24
SEC13-209ENST00000397117 SCAMP3O14828 347 aaKnown RBP13.53□□□□□ -0.24
SEC13-209ENST00000397117 GIPC1O14908 333 aa13.53□□□□□ -0.24
SEC13-209ENST00000397117 APBB3O95704 486 aa13.53□□□□□ -0.24
SEC13-209ENST00000397117 IFNB1P01574 187 aa13.53□□□□□ -0.24
SEC13-209ENST00000397117 STIP1P31948 543 aaKnown RBP13.53□□□□□ -0.24
SEC13-209ENST00000397117 PI4KAP42356 2102 aa13.53□□□□□ -0.24
SEC13-209ENST00000397117 DMC1Q14565 340 aa13.53□□□□□ -0.24
SEC13-209ENST00000397117 SLC45A4Q5BKX6 768 aa13.53□□□□□ -0.24
SEC13-209ENST00000397117 TTC39BQ5VTQ0 682 aaPredicted RBP13.53□□□□□ -0.24
SEC13-209ENST00000397117 Q6ZNB5 142 aa13.53□□□□□ -0.24
SEC13-209ENST00000397117 TFAP2DQ7Z6R9 452 aa13.53□□□□□ -0.24
SEC13-209ENST00000397117 CCDC33Q8N5R6 958 aa13.53□□□□□ -0.24
SEC13-209ENST00000397117 ALLCQ8N6M5 410 aa13.53□□□□□ -0.24
SEC13-209ENST00000397117 CCHCR1Q8TD31 782 aa13.53□□□□□ -0.24
SEC13-209ENST00000397117 OLFM3Q96PB7 478 aa13.53□□□□□ -0.24
SEC13-209ENST00000397117 ERP44Q9BS26 406 aa13.53□□□□□ -0.24
SEC13-209ENST00000397117 TRIM51Q9BSJ1 452 aa13.53□□□□□ -0.24
SEC13-209ENST00000397117 EDEM2Q9BV94 578 aa13.53□□□□□ -0.24
SEC13-209ENST00000397117 BRD8Q9H0E9 1235 aa13.53□□□□□ -0.24
SEC13-209ENST00000397117 RETREG1Q9H6L5 497 aa13.53□□□□□ -0.24
SEC13-209ENST00000397117 EPB41L5Q9HCM4 733 aa13.53□□□□□ -0.24
SEC13-209ENST00000397117 TMEM248Q9NWD8 314 aa13.53□□□□□ -0.24
SEC13-209ENST00000397117 ASIC3Q9UHC3 531 aa13.53□□□□□ -0.24
SEC13-209ENST00000397117 DMGDHQ9UI17 866 aaKnown RBP13.53□□□□□ -0.24
SEC13-209ENST00000397117 GON4LQ3T8J9 2241 aa13.53□□□□□ -0.24
SEC13-209ENST00000397117 ZFYVE26Q68DK2 2539 aa13.53□□□□□ -0.24
SEC13-209ENST00000397117 E2F8A0AVK6 867 aa13.53□□□□□ -0.24
SEC13-209ENST00000397117 C4orf47A7E2U8 309 aa13.53□□□□□ -0.24
SEC13-209ENST00000397117 DFFAO00273 331 aa13.53□□□□□ -0.24
SEC13-209ENST00000397117 GREM1O60565 184 aa13.53□□□□□ -0.24
SEC13-209ENST00000397117 TSPAN3O60637 253 aa13.53□□□□□ -0.24
SEC13-209ENST00000397117 ZNF189O75820 626 aaPredicted RBP13.53□□□□□ -0.24
SEC13-209ENST00000397117 CNTN5O94779 1100 aa13.53□□□□□ -0.24
SEC13-209ENST00000397117 KRT14P02533 472 aa13.53□□□□□ -0.24
SEC13-209ENST00000397117 CHKAP35790 457 aa13.53□□□□□ -0.24
SEC13-209ENST00000397117 CREB5Q02930 508 aa13.53□□□□□ -0.24
SEC13-209ENST00000397117 AP1B1Q10567 949 aa13.53□□□□□ -0.24
SEC13-209ENST00000397117 TRIP13Q15645 432 aaPredicted RBP13.53□□□□□ -0.24
SEC13-209ENST00000397117 C5orf22Q49AR2 442 aa13.53□□□□□ -0.24
SEC13-209ENST00000397117 ALFQ53S48 1182 aa13.53□□□□□ -0.24
SEC13-209ENST00000397117 B4GALNT4Q76KP1 1039 aa13.53□□□□□ -0.24
SEC13-209ENST00000397117 NLRP14Q86W24 1093 aa13.53□□□□□ -0.24
SEC13-209ENST00000397117 CFAP52Q8N1V2 620 aa13.53□□□□□ -0.24
SEC13-209ENST00000397117 CPA6Q8N4T0 437 aa13.53□□□□□ -0.24
SEC13-209ENST00000397117 NPWQ8N729 165 aa13.53□□□□□ -0.24
SEC13-209ENST00000397117 FAM71DQ8N9W8 422 aa13.53□□□□□ -0.24
SEC13-209ENST00000397117 OSCP1Q8WVF1 389 aa13.53□□□□□ -0.24
SEC13-209ENST00000397117 EXOC4Q96A65 974 aa13.53□□□□□ -0.24
SEC13-209ENST00000397117 CELF6Q96J87 481 aaKnown RBP13.53□□□□□ -0.24
SEC13-209ENST00000397117 QKIQ96PU8 341 aaKnown RBP eCLIP13.53□□□□□ -0.24
SEC13-209ENST00000397117 PNKPQ96T60 521 aa13.53□□□□□ -0.24
SEC13-209ENST00000397117 PARD6BQ9BYG5 372 aa13.53□□□□□ -0.24
SEC13-209ENST00000397117 TRIM31Q9BZY9 425 aa13.53□□□□□ -0.24
SEC13-209ENST00000397117 C10orf88Q9H8K7 445 aa13.53□□□□□ -0.24
SEC13-209ENST00000397117 HELZP42694 1942 aaKnown RBP13.52□□□□□ -0.24
SEC13-209ENST00000397117 C1QTNF9BB2RNN3 333 aa13.52□□□□□ -0.25
SEC13-209ENST00000397117 KCNN4O15554 427 aa13.52□□□□□ -0.25
SEC13-209ENST00000397117 CLDN11O75508 207 aa13.52□□□□□ -0.25
SEC13-209ENST00000397117 STK10O94804 968 aaKnown RBP13.52□□□□□ -0.25
SEC13-209ENST00000397117 C1QTNF9P0C862 333 aa13.52□□□□□ -0.25
SEC13-209ENST00000397117 OR1E1P30953 314 aa13.52□□□□□ -0.25
SEC13-209ENST00000397117 ACTN2P35609 894 aa13.52□□□□□ -0.25
SEC13-209ENST00000397117 ADCY8P40145 1251 aa13.52□□□□□ -0.25
SEC13-209ENST00000397117 MAPKAPK2P49137 400 aa13.52□□□□□ -0.25
SEC13-209ENST00000397117 NOVA1P51513 510 aaKnown RBP13.52□□□□□ -0.25
SEC13-209ENST00000397117 IRAK1P51617 712 aa13.52□□□□□ -0.25
SEC13-209ENST00000397117 NDST2P52849 883 aa13.52□□□□□ -0.25
SEC13-209ENST00000397117 CDH4P55283 916 aa13.52□□□□□ -0.25
SEC13-209ENST00000397117 GALNT2Q10471 571 aa13.52□□□□□ -0.25
SEC13-209ENST00000397117 PTK6Q13882 451 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms