RNA–Protein interactions for RNA: ENST00000397102.5

SEC13-206, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-206ENST00000397102 HDAC8Q9BY41 377 aa15.32■□□□□ 0.04
SEC13-206ENST00000397102 STARD5Q9NSY2 213 aa15.32■□□□□ 0.04
SEC13-206ENST00000397102 FAM237AA0A1B0GTK4 181 aa15.31■□□□□ 0.04
SEC13-206ENST00000397102 EFSO43281 561 aa15.31■□□□□ 0.04
SEC13-206ENST00000397102 CLDN11O75508 207 aa15.31■□□□□ 0.04
SEC13-206ENST00000397102 CCR1P32246 355 aa15.31■□□□□ 0.04
SEC13-206ENST00000397102 RABIFP47224 123 aa15.31■□□□□ 0.04
SEC13-206ENST00000397102 IRAK1P51617 712 aa15.31■□□□□ 0.04
SEC13-206ENST00000397102 NDUFA8P51970 172 aa15.31■□□□□ 0.04
SEC13-206ENST00000397102 PDX1P52945 283 aa15.31■□□□□ 0.04
SEC13-206ENST00000397102 RPS21P63220 83 aaKnown RBP15.31■□□□□ 0.04
SEC13-206ENST00000397102 KRT83P78385 493 aa15.31■□□□□ 0.04
SEC13-206ENST00000397102 FKBP3Q00688 224 aaKnown RBP15.31■□□□□ 0.04
SEC13-206ENST00000397102 AUHQ13825 339 aaKnown RBP15.31■□□□□ 0.04
SEC13-206ENST00000397102 FGL2Q14314 439 aa15.31■□□□□ 0.04
SEC13-206ENST00000397102 COLEC12Q5KU26 742 aa15.31■□□□□ 0.04
SEC13-206ENST00000397102 KIAA1161Q6NSJ0 714 aa15.31■□□□□ 0.04
SEC13-206ENST00000397102 KRBA2Q6ZNG9 492 aa15.31■□□□□ 0.04
SEC13-206ENST00000397102 ATP11CQ8NB49 1132 aa15.31■□□□□ 0.04
SEC13-206ENST00000397102 KAT5Q92993 513 aa15.31■□□□□ 0.04
SEC13-206ENST00000397102 NAT6Q93015 286 aa15.31■□□□□ 0.04
SEC13-206ENST00000397102 PPP1R16AQ96I34 528 aa15.31■□□□□ 0.04
SEC13-206ENST00000397102 MED15Q96RN5 788 aa15.31■□□□□ 0.04
SEC13-206ENST00000397102 IL12RB2Q99665 862 aa15.31■□□□□ 0.04
SEC13-206ENST00000397102 TSG101Q99816 390 aa15.31■□□□□ 0.04
SEC13-206ENST00000397102 BOCQ9BWV1 1114 aa15.31■□□□□ 0.04
SEC13-206ENST00000397102 SLC4A5Q9BY07 1137 aa15.31■□□□□ 0.04
SEC13-206ENST00000397102 SLC17A9Q9BYT1 436 aa15.31■□□□□ 0.04
SEC13-206ENST00000397102 THAP9Q9H5L6 903 aa15.31■□□□□ 0.04
SEC13-206ENST00000397102 FAM204AQ9H8W3 233 aa15.31■□□□□ 0.04
SEC13-206ENST00000397102 ARMCX3Q9UH62 379 aaPredicted RBP15.31■□□□□ 0.04
SEC13-206ENST00000397102 IPO11Q9UI26 975 aaKnown RBP15.31■□□□□ 0.04
SEC13-206ENST00000397102 KLF15Q9UIH9 416 aa15.31■□□□□ 0.04
SEC13-206ENST00000397102 VANGL2Q9ULK5 521 aa15.31■□□□□ 0.04
SEC13-206ENST00000397102 TBC1D30Q9Y2I9 924 aa15.31■□□□□ 0.04
SEC13-206ENST00000397102 E5RJQ4 531 aa15.3■□□□□ 0.04
SEC13-206ENST00000397102 RNF103O00237 685 aa15.3■□□□□ 0.04
SEC13-206ENST00000397102 MUSKO15146 869 aa15.3■□□□□ 0.04
SEC13-206ENST00000397102 PMM2O15305 246 aa15.3■□□□□ 0.04
SEC13-206ENST00000397102 UBR5O95071 2799 aaPredicted RBP15.3■□□□□ 0.04
SEC13-206ENST00000397102 GJB6O95452 261 aa15.3■□□□□ 0.04
SEC13-206ENST00000397102 PAK4O96013 591 aaPredicted RBP15.3■□□□□ 0.04
SEC13-206ENST00000397102 MT-CO1P00395 513 aa15.3■□□□□ 0.04
SEC13-206ENST00000397102 ITGB2P05107 769 aa15.3■□□□□ 0.04
SEC13-206ENST00000397102 JUNDP17535 347 aa15.3■□□□□ 0.04
SEC13-206ENST00000397102 RPIAP49247 311 aa15.3■□□□□ 0.04
SEC13-206ENST00000397102 FMO5P49326 533 aa15.3■□□□□ 0.04
SEC13-206ENST00000397102 NEK3P51956 506 aa15.3■□□□□ 0.04
SEC13-206ENST00000397102 MTA1Q13330 715 aa15.3■□□□□ 0.04
SEC13-206ENST00000397102 SPIDRQ14159 915 aa15.3■□□□□ 0.04
SEC13-206ENST00000397102 DRAP1Q14919 205 aaPredicted RBP15.3■□□□□ 0.04
SEC13-206ENST00000397102 MEA1Q16626 185 aa15.3■□□□□ 0.04
SEC13-206ENST00000397102 USP53Q70EK8 1073 aa15.3■□□□□ 0.04
SEC13-206ENST00000397102 TMEM110Q86TL2 294 aa15.3■□□□□ 0.04
SEC13-206ENST00000397102 CHST14Q8NCH0 376 aa15.3■□□□□ 0.04
SEC13-206ENST00000397102 LMX1AQ8TE12 382 aa15.3■□□□□ 0.04
SEC13-206ENST00000397102 BTN2A2Q8WVV5 523 aa15.3■□□□□ 0.04
SEC13-206ENST00000397102 GLMNQ92990 594 aa15.3■□□□□ 0.04
SEC13-206ENST00000397102 SGF29Q96ES7 293 aa15.3■□□□□ 0.04
SEC13-206ENST00000397102 LIN37Q96GY3 246 aaPredicted RBP15.3■□□□□ 0.04
SEC13-206ENST00000397102 PSMB7Q99436 277 aa15.3■□□□□ 0.04
SEC13-206ENST00000397102 ARHGAP9Q9BRR9 750 aa15.3■□□□□ 0.04
SEC13-206ENST00000397102 C2orf49Q9BVC5 232 aaPredicted RBP15.3■□□□□ 0.04
SEC13-206ENST00000397102 MUC3BQ9H195 1237 aa15.3■□□□□ 0.04
SEC13-206ENST00000397102 METTL14Q9HCE5 456 aaKnown RBP15.3■□□□□ 0.04
SEC13-206ENST00000397102 DDIT4Q9NX09 232 aa15.3■□□□□ 0.04
SEC13-206ENST00000397102 IL36AQ9UHA7 158 aa15.3■□□□□ 0.04
SEC13-206ENST00000397102 PCDHGA7Q9Y5G6 932 aa15.3■□□□□ 0.04
SEC13-206ENST00000397102 K7ERQ8 282 aa15.29■□□□□ 0.04
SEC13-206ENST00000397102 FPGTO14772 594 aa15.29■□□□□ 0.04
SEC13-206ENST00000397102 RAD51BO15315 384 aa15.29■□□□□ 0.04
SEC13-206ENST00000397102 SUV39H1O43463 412 aa15.29■□□□□ 0.04
SEC13-206ENST00000397102 SNAP91O60641 907 aa15.29■□□□□ 0.04
SEC13-206ENST00000397102 ITGB6P18564 788 aa15.29■□□□□ 0.04
SEC13-206ENST00000397102 CLCN6P51797 869 aa15.29■□□□□ 0.04
SEC13-206ENST00000397102 CDH4P55283 916 aa15.29■□□□□ 0.04
SEC13-206ENST00000397102 CDK17Q00537 523 aa15.29■□□□□ 0.04
SEC13-206ENST00000397102 NFKB2Q00653 900 aa15.29■□□□□ 0.04
SEC13-206ENST00000397102 EIF3IQ13347 325 aaKnown RBP15.29■□□□□ 0.04
SEC13-206ENST00000397102 PDE1CQ14123 709 aaPredicted RBP15.29■□□□□ 0.04
SEC13-206ENST00000397102 C5orf22Q49AR2 442 aa15.29■□□□□ 0.04
SEC13-206ENST00000397102 ARSIQ5FYB1 569 aa15.29■□□□□ 0.04
SEC13-206ENST00000397102 DENND1BQ6P3S1 775 aa15.29■□□□□ 0.04
SEC13-206ENST00000397102 ZNF574Q6ZN55 896 aaPredicted RBP15.29■□□□□ 0.04
SEC13-206ENST00000397102 ZSCAN30Q86W11 494 aa15.29■□□□□ 0.04
SEC13-206ENST00000397102 GRIN3AQ8TCU5 1115 aa15.29■□□□□ 0.04
SEC13-206ENST00000397102 FEM1CQ96JP0 617 aa15.29■□□□□ 0.04
SEC13-206ENST00000397102 WDR70Q9NW82 654 aa15.29■□□□□ 0.04
SEC13-206ENST00000397102 SPASTQ9UBP0 616 aa15.29■□□□□ 0.04
SEC13-206ENST00000397102 VPS51Q9UID3 782 aa15.29■□□□□ 0.04
SEC13-206ENST00000397102 ACSL6Q9UKU0 697 aa15.29■□□□□ 0.04
SEC13-206ENST00000397102 HS3ST4Q9Y661 456 aa15.29■□□□□ 0.04
SEC13-206ENST00000397102 SCN8AQ9UQD0 1980 aa15.29■□□□□ 0.04
SEC13-206ENST00000397102 DOPEY2Q9Y3R5 2298 aa15.28■□□□□ 0.04
SEC13-206ENST00000397102 SYNJ2BP-COX16A0A087WUM0 186 aa15.28■□□□□ 0.04
SEC13-206ENST00000397102 NTN3O00634 580 aaPredicted RBP15.28■□□□□ 0.04
SEC13-206ENST00000397102 PLD2O14939 933 aa15.28■□□□□ 0.04
SEC13-206ENST00000397102 SMAD6O43541 496 aaKnown RBP15.28■□□□□ 0.04
SEC13-206ENST00000397102 LEFTY1O75610 366 aa15.28■□□□□ 0.04
SEC13-206ENST00000397102 SFTPCP11686 197 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms