RNA–Protein interactions for RNA: ENST00000396545.4

TNFSF13-205, Transcript of TNF superfamily member 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TNFSF13, Length 1,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-205ENST00000396545 TTC13Q8NBP0 860 aa17.91■□□□□ 0.46
TNFSF13-205ENST00000396545 BBOF1Q8ND07 529 aa17.91■□□□□ 0.46
TNFSF13-205ENST00000396545 SLC35B2Q8TB61 432 aa17.91■□□□□ 0.46
TNFSF13-205ENST00000396545 CCHCR1Q8TD31 782 aa17.91■□□□□ 0.46
TNFSF13-205ENST00000396545 CLEC4CQ8WTT0 213 aa17.91■□□□□ 0.46
TNFSF13-205ENST00000396545 FAM172AQ8WUF8 416 aa17.91■□□□□ 0.46
TNFSF13-205ENST00000396545 CFAP57Q96MR6 1250 aa17.91■□□□□ 0.46
TNFSF13-205ENST00000396545 FAM118BQ9BPY3 351 aa17.91■□□□□ 0.46
TNFSF13-205ENST00000396545 PCSK1NQ9UHG2 260 aa17.91■□□□□ 0.46
TNFSF13-205ENST00000396545 STARD13Q9Y3M8 1113 aa17.91■□□□□ 0.46
TNFSF13-205ENST00000396545 IGF2RP11717 2491 aa17.9■□□□□ 0.46
TNFSF13-205ENST00000396545 GIPC1O14908 333 aa17.9■□□□□ 0.46
TNFSF13-205ENST00000396545 MAP3K13O43283 966 aa17.9■□□□□ 0.46
TNFSF13-205ENST00000396545 CACNG3O60359 315 aa17.9■□□□□ 0.46
TNFSF13-205ENST00000396545 LTFP02788 710 aa17.9■□□□□ 0.46
TNFSF13-205ENST00000396545 ITGAVP06756 1048 aa17.9■□□□□ 0.46
TNFSF13-205ENST00000396545 RARGP13631 454 aa17.9■□□□□ 0.46
TNFSF13-205ENST00000396545 EIF3BP55884 814 aaKnown RBP17.9■□□□□ 0.46
TNFSF13-205ENST00000396545 TAF5Q15542 800 aa17.9■□□□□ 0.46
TNFSF13-205ENST00000396545 C15orf59Q2T9L4 293 aaPredicted RBP17.9■□□□□ 0.46
TNFSF13-205ENST00000396545 CEP85LQ5SZL2 805 aa17.9■□□□□ 0.46
TNFSF13-205ENST00000396545 SH3PXD2AQ5TCZ1 1133 aa17.9■□□□□ 0.46
TNFSF13-205ENST00000396545 KLHDC10Q6PID8 442 aa17.9■□□□□ 0.46
TNFSF13-205ENST00000396545 NUDT18Q6ZVK8 323 aa17.9■□□□□ 0.46
TNFSF13-205ENST00000396545 ARMCX6Q7L4S7 300 aa17.9■□□□□ 0.46
TNFSF13-205ENST00000396545 MIB1Q86YT6 1006 aa17.9■□□□□ 0.46
TNFSF13-205ENST00000396545 SYT12Q8IV01 421 aa17.9■□□□□ 0.46
TNFSF13-205ENST00000396545 PSTKQ8IV42 348 aaKnown RBP17.9■□□□□ 0.46
TNFSF13-205ENST00000396545 MAP7D3Q8IWC1 876 aa17.9■□□□□ 0.46
TNFSF13-205ENST00000396545 DEFB106AQ8N104 65 aa17.9■□□□□ 0.46
TNFSF13-205ENST00000396545 FAM76AQ8TAV0 307 aa17.9■□□□□ 0.46
TNFSF13-205ENST00000396545 TMEM74BQ9NUR3 256 aa17.9■□□□□ 0.46
TNFSF13-205ENST00000396545 MARK1Q9P0L2 795 aa17.9■□□□□ 0.46
TNFSF13-205ENST00000396545 ASCC3Q8N3C0 2202 aaKnown RBP17.9■□□□□ 0.46
TNFSF13-205ENST00000396545 ZNF487B1APH4 448 aa17.89■□□□□ 0.45
TNFSF13-205ENST00000396545 CAPN9O14815 690 aa17.89■□□□□ 0.45
TNFSF13-205ENST00000396545 MDM4O15151 490 aa17.89■□□□□ 0.45
TNFSF13-205ENST00000396545 CD48P09326 243 aa17.89■□□□□ 0.45
TNFSF13-205ENST00000396545 GABRG2P18507 467 aa17.89■□□□□ 0.45
TNFSF13-205ENST00000396545 ATP5C1P36542 298 aaKnown RBP17.89■□□□□ 0.45
TNFSF13-205ENST00000396545 AIF1P55008 147 aa17.89■□□□□ 0.45
TNFSF13-205ENST00000396545 DMTNQ08495 405 aa17.89■□□□□ 0.45
TNFSF13-205ENST00000396545 PDK2Q15119 407 aa17.89■□□□□ 0.45
TNFSF13-205ENST00000396545 TRIM61Q5EBN2 209 aa17.89■□□□□ 0.45
TNFSF13-205ENST00000396545 GRAMD4Q6IC98 578 aa17.89■□□□□ 0.45
TNFSF13-205ENST00000396545 ARHGAP18Q8N392 663 aa17.89■□□□□ 0.45
TNFSF13-205ENST00000396545 KCTD6Q8NC69 237 aa17.89■□□□□ 0.45
TNFSF13-205ENST00000396545 PGAP3Q96FM1 320 aaPredicted RBP17.89■□□□□ 0.45
TNFSF13-205ENST00000396545 ATP6V1G3Q96LB4 118 aa17.89■□□□□ 0.45
TNFSF13-205ENST00000396545 NPY6RQ99463 290 aa17.89■□□□□ 0.45
TNFSF13-205ENST00000396545 TSPYL1Q9H0U9 437 aa17.89■□□□□ 0.45
TNFSF13-205ENST00000396545 NMUR1Q9HB89 426 aa17.89■□□□□ 0.45
TNFSF13-205ENST00000396545 CD248Q9HCU0 757 aa17.89■□□□□ 0.45
TNFSF13-205ENST00000396545 DNAJC17Q9NVM6 304 aaKnown RBP17.89■□□□□ 0.45
TNFSF13-205ENST00000396545 PI4KAP42356 2102 aa17.88■□□□□ 0.45
TNFSF13-205ENST00000396545 A0A1W2PQF6 199 aa17.88■□□□□ 0.45
TNFSF13-205ENST00000396545 HMGB1P1B2RPK0 211 aaPredicted RBP17.88■□□□□ 0.45
TNFSF13-205ENST00000396545 NEDD8-MDP1E9PL57 170 aa17.88■□□□□ 0.45
TNFSF13-205ENST00000396545 CST8O60676 142 aa17.88■□□□□ 0.45
TNFSF13-205ENST00000396545 F9P00740 461 aa17.88■□□□□ 0.45
TNFSF13-205ENST00000396545 HOXB2P14652 356 aa17.88■□□□□ 0.45
TNFSF13-205ENST00000396545 TYRP14679 529 aa17.88■□□□□ 0.45
TNFSF13-205ENST00000396545 CSRP1P21291 193 aaKnown RBP17.88■□□□□ 0.45
TNFSF13-205ENST00000396545 NTSR1P30989 418 aa17.88■□□□□ 0.45
TNFSF13-205ENST00000396545 ITGA8P53708 1063 aa17.88■□□□□ 0.45
TNFSF13-205ENST00000396545 ATP11AP98196 1134 aa17.88■□□□□ 0.45
TNFSF13-205ENST00000396545 LMAN2Q12907 356 aa17.88■□□□□ 0.45
TNFSF13-205ENST00000396545 TRIP13Q15645 432 aaPredicted RBP17.88■□□□□ 0.45
TNFSF13-205ENST00000396545 RAB6CQ53S08 254 aa17.88■□□□□ 0.45
TNFSF13-205ENST00000396545 DCAF6Q58WW2 860 aa17.88■□□□□ 0.45
TNFSF13-205ENST00000396545 PEAR1Q5VY43 1037 aaPredicted RBP17.88■□□□□ 0.45
TNFSF13-205ENST00000396545 LYSMD4Q5XG99 296 aa17.88■□□□□ 0.45
TNFSF13-205ENST00000396545 BNIPLQ7Z465 357 aa17.88■□□□□ 0.45
TNFSF13-205ENST00000396545 PGBD3Q8N328 593 aa17.88■□□□□ 0.45
TNFSF13-205ENST00000396545 OR2W6PQ8NHA6 318 aa17.88■□□□□ 0.45
TNFSF13-205ENST00000396545 HSPH1Q92598 858 aa17.88■□□□□ 0.45
TNFSF13-205ENST00000396545 BBS2Q9BXC9 721 aa17.88■□□□□ 0.45
TNFSF13-205ENST00000396545 RAB6CQ9H0N0 254 aa17.88■□□□□ 0.45
TNFSF13-205ENST00000396545 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.88■□□□□ 0.45
TNFSF13-205ENST00000396545 CALCOCO1Q9P1Z2 691 aa17.88■□□□□ 0.45
TNFSF13-205ENST00000396545 LSM7Q9UK45 103 aaKnown RBP17.88■□□□□ 0.45
TNFSF13-205ENST00000396545 AKAP13Q12802 2813 aa17.88■□□□□ 0.45
TNFSF13-205ENST00000396545 A0A1W2PQH9 124 aa17.87■□□□□ 0.45
TNFSF13-205ENST00000396545 YJEFN3A6XGL0 299 aa17.87■□□□□ 0.45
TNFSF13-205ENST00000396545 E7ENQ6 273 aa17.87■□□□□ 0.45
TNFSF13-205ENST00000396545 CEACAM1P13688 526 aa17.87■□□□□ 0.45
TNFSF13-205ENST00000396545 ADCY8P40145 1251 aa17.87■□□□□ 0.45
TNFSF13-205ENST00000396545 DPP6P42658 865 aa17.87■□□□□ 0.45
TNFSF13-205ENST00000396545 HDAC4P56524 1084 aa17.87■□□□□ 0.45
TNFSF13-205ENST00000396545 CDO1Q16878 200 aa17.87■□□□□ 0.45
TNFSF13-205ENST00000396545 EGFLAMQ63HQ2 1017 aa17.87■□□□□ 0.45
TNFSF13-205ENST00000396545 Q6ZNB5 142 aa17.87■□□□□ 0.45
TNFSF13-205ENST00000396545 XPO6Q96QU8 1125 aaKnown RBP17.87■□□□□ 0.45
TNFSF13-205ENST00000396545 ACOX2Q99424 681 aa17.87■□□□□ 0.45
TNFSF13-205ENST00000396545 NUSAP1Q9BXS6 441 aaKnown RBP17.87■□□□□ 0.45
TNFSF13-205ENST00000396545 PRDM16Q9HAZ2 1276 aa17.87■□□□□ 0.45
TNFSF13-205ENST00000396545 ABCC13Q9NSE7 274 aa17.87■□□□□ 0.45
TNFSF13-205ENST00000396545 PILRBQ9UKJ0 227 aa17.87■□□□□ 0.45
TNFSF13-205ENST00000396545 ZNF148Q9UQR1 794 aa17.87■□□□□ 0.45
TNFSF13-205ENST00000396545 CACNA1EQ15878 2313 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms