RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 CATP04040 527 aaKnown RBP5.53□□□□□ -1.52
VPS13C-204ENST00000395898 LRPAP1P30533 357 aa5.53□□□□□ -1.52
VPS13C-204ENST00000395898 S100A3P33764 101 aa5.53□□□□□ -1.52
VPS13C-204ENST00000395898 HNMTP50135 292 aa5.53□□□□□ -1.52
VPS13C-204ENST00000395898 ZNF844Q08AG5 666 aa5.53□□□□□ -1.52
VPS13C-204ENST00000395898 ZNHIT3Q15649 155 aaPredicted RBP5.53□□□□□ -1.52
VPS13C-204ENST00000395898 ARMC4Q5T2S8 1044 aa5.53□□□□□ -1.52
VPS13C-204ENST00000395898 KIAA0408Q6ZU52 694 aa5.53□□□□□ -1.52
VPS13C-204ENST00000395898 CREG2Q8IUH2 290 aa5.53□□□□□ -1.52
VPS13C-204ENST00000395898 TRAPPC5Q8IUR0 188 aa5.53□□□□□ -1.52
VPS13C-204ENST00000395898 HEXDCQ8WVB3 486 aa5.53□□□□□ -1.52
VPS13C-204ENST00000395898 RRAGCQ9HB90 399 aa5.53□□□□□ -1.52
VPS13C-204ENST00000395898 RGPD8O14715 1765 aaPredicted RBP5.53□□□□□ -1.52
VPS13C-204ENST00000395898 MYPNQ86TC9 1320 aa5.53□□□□□ -1.52
VPS13C-204ENST00000395898 MYO9BQ13459 2157 aa5.53□□□□□ -1.52
VPS13C-204ENST00000395898 TPP1O14773 563 aa5.53□□□□□ -1.52
VPS13C-204ENST00000395898 DDNO94850 711 aaPredicted RBP5.53□□□□□ -1.52
VPS13C-204ENST00000395898 ECDO95905 644 aaPredicted RBP5.53□□□□□ -1.52
VPS13C-204ENST00000395898 COPZ1P61923 177 aa5.53□□□□□ -1.52
VPS13C-204ENST00000395898 CYP2A13Q16696 494 aa5.53□□□□□ -1.52
VPS13C-204ENST00000395898 DACT2Q5SW24 774 aa5.53□□□□□ -1.52
VPS13C-204ENST00000395898 TTC27Q6P3X3 843 aa5.53□□□□□ -1.52
VPS13C-204ENST00000395898 ZNF605Q86T29 641 aa5.53□□□□□ -1.52
VPS13C-204ENST00000395898 C11orf74Q86VG3 221 aa5.53□□□□□ -1.52
VPS13C-204ENST00000395898 CYP2W1Q8TAV3 490 aa5.53□□□□□ -1.52
VPS13C-204ENST00000395898 RDH11Q8TC12 318 aa5.53□□□□□ -1.52
VPS13C-204ENST00000395898 CENPIQ92674 756 aaPredicted RBP5.53□□□□□ -1.52
VPS13C-204ENST00000395898 TINF2Q9BSI4 451 aa5.53□□□□□ -1.52
VPS13C-204ENST00000395898 ASB8Q9H765 288 aa5.53□□□□□ -1.52
VPS13C-204ENST00000395898 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.53□□□□□ -1.521e-10■■■■■ 32.8
VPS13C-204ENST00000395898 DUSP12Q9UNI6 340 aa5.53□□□□□ -1.52
VPS13C-204ENST00000395898 PIPSLA2A3N6 862 aa5.53□□□□□ -1.52
VPS13C-204ENST00000395898 TBC1D3BA6NDS4 549 aa5.53□□□□□ -1.52
VPS13C-204ENST00000395898 HIST1H2ABP04908 130 aa5.53□□□□□ -1.52
VPS13C-204ENST00000395898 TBX2Q13207 712 aaPredicted RBP5.53□□□□□ -1.52
VPS13C-204ENST00000395898 DGUOKQ16854 277 aa5.53□□□□□ -1.52
VPS13C-204ENST00000395898 HECTD3Q5T447 861 aa5.53□□□□□ -1.52
VPS13C-204ENST00000395898 APOBEC3HQ6NTF7 200 aaKnown RBP5.53□□□□□ -1.52
VPS13C-204ENST00000395898 HIST3H2AQ7L7L0 130 aa5.53□□□□□ -1.52
VPS13C-204ENST00000395898 SYT12Q8IV01 421 aa5.53□□□□□ -1.52
VPS13C-204ENST00000395898 ADAM32Q8TC27 787 aa5.53□□□□□ -1.52
VPS13C-204ENST00000395898 SELENOMQ8WWX9 145 aa5.53□□□□□ -1.52
VPS13C-204ENST00000395898 HIST1H2ACQ93077 130 aa5.53□□□□□ -1.52
VPS13C-204ENST00000395898 SLC35C1Q96A29 364 aa5.53□□□□□ -1.52
VPS13C-204ENST00000395898 MTMR9Q96QG7 549 aa5.53□□□□□ -1.52
VPS13C-204ENST00000395898 TLR10Q9BXR5 811 aa5.53□□□□□ -1.52
VPS13C-204ENST00000395898 CD248Q9HCU0 757 aa5.53□□□□□ -1.52
VPS13C-204ENST00000395898 TNFSF13BQ9Y275 285 aa5.53□□□□□ -1.52
VPS13C-204ENST00000395898 RICTORQ6R327 1708 aa5.53□□□□□ -1.52
VPS13C-204ENST00000395898 H0YC42 278 aa5.52□□□□□ -1.53
VPS13C-204ENST00000395898 DDX3XO00571 662 aaKnown RBP eCLIP5.52□□□□□ -1.537e-16■■■■■ 39.8
VPS13C-204ENST00000395898 GCATO75600 419 aa5.52□□□□□ -1.53
VPS13C-204ENST00000395898 PDE5AO76074 875 aa5.52□□□□□ -1.53
VPS13C-204ENST00000395898 NUDT14O95848 222 aa5.52□□□□□ -1.53
VPS13C-204ENST00000395898 ALADP13716 330 aa5.52□□□□□ -1.53
VPS13C-204ENST00000395898 PECAM1P16284 738 aaPredicted RBP5.52□□□□□ -1.53
VPS13C-204ENST00000395898 MAMLD1Q13495 774 aa5.52□□□□□ -1.53
VPS13C-204ENST00000395898 GRM3Q14832 879 aa5.52□□□□□ -1.53
VPS13C-204ENST00000395898 STXBP5Q5T5C0 1151 aa5.52□□□□□ -1.53
VPS13C-204ENST00000395898 C1orf50Q9BV19 199 aa5.52□□□□□ -1.53
VPS13C-204ENST00000395898 OXCT2Q9BYC2 517 aaPredicted RBP5.52□□□□□ -1.53
VPS13C-204ENST00000395898 DERAQ9Y315 318 aa5.52□□□□□ -1.53
VPS13C-204ENST00000395898 GAKO14976 1311 aa5.52□□□□□ -1.53
VPS13C-204ENST00000395898 MYOM1P52179 1685 aa5.52□□□□□ -1.53
VPS13C-204ENST00000395898 TEX28O15482 410 aa5.52□□□□□ -1.53
VPS13C-204ENST00000395898 RBL1P28749 1068 aa5.52□□□□□ -1.53
VPS13C-204ENST00000395898 FEN1P39748 380 aaKnown RBP5.52□□□□□ -1.53
VPS13C-204ENST00000395898 MAPKAPK3Q16644 382 aa5.52□□□□□ -1.53
VPS13C-204ENST00000395898 FGD3Q5JSP0 725 aa5.52□□□□□ -1.53
VPS13C-204ENST00000395898 SNX30Q5VWJ9 437 aa5.52□□□□□ -1.53
VPS13C-204ENST00000395898 ZFP28Q8NHY6 868 aa5.52□□□□□ -1.53
VPS13C-204ENST00000395898 CELF6Q96J87 481 aaKnown RBP5.52□□□□□ -1.53
VPS13C-204ENST00000395898 FAM192AQ9GZU8 254 aa5.52□□□□□ -1.53
VPS13C-204ENST00000395898 NEK6Q9HC98 313 aa5.52□□□□□ -1.53
VPS13C-204ENST00000395898 KPNA3O00505 521 aaPredicted RBP5.52□□□□□ -1.53
VPS13C-204ENST00000395898 BIKQ13323 160 aa5.52□□□□□ -1.53
VPS13C-204ENST00000395898 FAM180AQ6UWF9 173 aa5.52□□□□□ -1.53
VPS13C-204ENST00000395898 IKBIPQ70UQ0 350 aa5.52□□□□□ -1.53
VPS13C-204ENST00000395898 CAMK1DQ8IU85 385 aa5.52□□□□□ -1.53
VPS13C-204ENST00000395898 TMEM199Q8N511 208 aa5.52□□□□□ -1.53
VPS13C-204ENST00000395898 LRRC52Q8N7C0 313 aa5.52□□□□□ -1.53
VPS13C-204ENST00000395898 ANKRD52Q8NB46 1076 aa5.52□□□□□ -1.53
VPS13C-204ENST00000395898 EPS8L1Q8TE68 723 aa5.52□□□□□ -1.53
VPS13C-204ENST00000395898 KAT5Q92993 513 aa5.52□□□□□ -1.53
VPS13C-204ENST00000395898 CLEC4MQ9H2X3 399 aaPredicted RBP5.52□□□□□ -1.53
VPS13C-204ENST00000395898 ZMYND8Q9ULU4 1186 aaPredicted RBP5.52□□□□□ -1.53
VPS13C-204ENST00000395898 CCDC166P0CW27 439 aa5.52□□□□□ -1.53
VPS13C-204ENST00000395898 PPM1AP35813 382 aa5.52□□□□□ -1.53
VPS13C-204ENST00000395898 CLCN5P51795 746 aa5.52□□□□□ -1.53
VPS13C-204ENST00000395898 TRAF3Q13114 568 aa5.52□□□□□ -1.53
VPS13C-204ENST00000395898 NEK5Q6P3R8 708 aa5.52□□□□□ -1.53
VPS13C-204ENST00000395898 POMGNT2Q8NAT1 580 aa5.52□□□□□ -1.53
VPS13C-204ENST00000395898 MRPL57Q9BQC6 102 aaKnown RBP5.52□□□□□ -1.53
VPS13C-204ENST00000395898 BTBD7Q9P203 1132 aa5.52□□□□□ -1.53
VPS13C-204ENST00000395898 COL1A2P08123 1366 aa5.52□□□□□ -1.53
VPS13C-204ENST00000395898 LRRC14BA6NHZ5 514 aa5.52□□□□□ -1.53
VPS13C-204ENST00000395898 H3BQF6 201 aa5.52□□□□□ -1.53
VPS13C-204ENST00000395898 ATP9AO75110 1047 aa5.52□□□□□ -1.53
VPS13C-204ENST00000395898 ABHD2P08910 425 aa5.52□□□□□ -1.53
VPS13C-204ENST00000395898 ACAT1P24752 427 aaKnown RBP5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms