RNA–Protein interactions for RNA: ENST00000395715.7

TRPS1-203, Transcript of transcriptional repressor GATA binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRPS1, Length 9,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-203ENST00000395715 UPP2O95045 317 aa8.09□□□□□ -1.11
TRPS1-203ENST00000395715 VNN2O95498 520 aa8.09□□□□□ -1.11
TRPS1-203ENST00000395715 TPTEP56180 551 aa8.09□□□□□ -1.11
TRPS1-203ENST00000395715 SSX2Q16385 188 aa8.09□□□□□ -1.11
TRPS1-203ENST00000395715 TRAPPC11Q7Z392 1133 aa8.09□□□□□ -1.11
TRPS1-203ENST00000395715 POU5F2Q8N7G0 328 aa8.09□□□□□ -1.11
TRPS1-203ENST00000395715 LPCAT1Q8NF37 534 aa8.09□□□□□ -1.11
TRPS1-203ENST00000395715 CEP76Q8TAP6 659 aa8.09□□□□□ -1.11
TRPS1-203ENST00000395715 TCEAL3Q969E4 200 aa8.09□□□□□ -1.11
TRPS1-203ENST00000395715 C12orf43Q96C57 262 aaKnown RBP8.09□□□□□ -1.11
TRPS1-203ENST00000395715 MGME1Q9BQP7 344 aa8.09□□□□□ -1.11
TRPS1-203ENST00000395715 ZNF700Q9H0M5 742 aa8.09□□□□□ -1.11
TRPS1-203ENST00000395715 GANQ9H2C0 597 aa8.09□□□□□ -1.11
TRPS1-203ENST00000395715 KIAA1257Q9ULG3 409 aa8.09□□□□□ -1.11
TRPS1-203ENST00000395715 ATP10DQ9P241 1426 aa8.09□□□□□ -1.11
TRPS1-203ENST00000395715 TVP23AA6NH52 213 aa8.09□□□□□ -1.11
TRPS1-203ENST00000395715 DCXO43602 365 aa8.09□□□□□ -1.11
TRPS1-203ENST00000395715 ZBTB11O95625 1053 aaPredicted RBP8.09□□□□□ -1.11
TRPS1-203ENST00000395715 IFNA2P01563 188 aa8.09□□□□□ -1.11
TRPS1-203ENST00000395715 ANXA5P08758 320 aa8.09□□□□□ -1.11
TRPS1-203ENST00000395715 GIT2Q14161 759 aa8.09□□□□□ -1.11
TRPS1-203ENST00000395715 SEMA3AQ14563 771 aa8.09□□□□□ -1.11
TRPS1-203ENST00000395715 CLCA4Q14CN2 919 aa8.09□□□□□ -1.11
TRPS1-203ENST00000395715 NKX1-1Q15270 411 aaPredicted RBP8.09□□□□□ -1.11
TRPS1-203ENST00000395715 TTMPQ5BVD1 217 aa8.09□□□□□ -1.11
TRPS1-203ENST00000395715 CXorf57Q6NSI4 855 aaKnown RBP8.09□□□□□ -1.11
TRPS1-203ENST00000395715 OXR1Q8N573 874 aa8.09□□□□□ -1.11
TRPS1-203ENST00000395715 ZNF248Q8NDW4 579 aa8.09□□□□□ -1.11
TRPS1-203ENST00000395715 PTCD3Q96EY7 689 aaKnown RBP8.09□□□□□ -1.11
TRPS1-203ENST00000395715 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.09□□□□□ -1.11
TRPS1-203ENST00000395715 A0A1B0GVC2 190 aa8.09□□□□□ -1.11
TRPS1-203ENST00000395715 TSTD3H0UI37 97 aa8.09□□□□□ -1.11
TRPS1-203ENST00000395715 CIAPIN1Q6FI81 312 aa8.09□□□□□ -1.11
TRPS1-203ENST00000395715 WDR93Q6P2C0 686 aa8.09□□□□□ -1.11
TRPS1-203ENST00000395715 CHST4Q8NCG5 386 aa8.09□□□□□ -1.11
TRPS1-203ENST00000395715 MMP19Q99542 508 aa8.09□□□□□ -1.11
TRPS1-203ENST00000395715 ENTPD4Q9Y227 616 aa8.09□□□□□ -1.11
TRPS1-203ENST00000395715 MT-CO1P00395 513 aa8.09□□□□□ -1.11
TRPS1-203ENST00000395715 YES1P07947 543 aa8.09□□□□□ -1.11
TRPS1-203ENST00000395715 CSHL1Q14406 222 aa8.09□□□□□ -1.11
TRPS1-203ENST00000395715 C11orf63Q6NUN7 778 aa8.09□□□□□ -1.11
TRPS1-203ENST00000395715 PPP1R13LQ8WUF5 828 aa8.09□□□□□ -1.11
TRPS1-203ENST00000395715 ACE2Q9BYF1 805 aaPredicted RBP8.09□□□□□ -1.11
TRPS1-203ENST00000395715 LOC100509620A0A075B734 347 aa8.09□□□□□ -1.11
TRPS1-203ENST00000395715 CENPBD1B2RD01 187 aa8.09□□□□□ -1.11
TRPS1-203ENST00000395715 TSPAN5P62079 268 aa8.09□□□□□ -1.11
TRPS1-203ENST00000395715 AMPD2Q01433 879 aa8.09□□□□□ -1.11
TRPS1-203ENST00000395715 MPP5Q8N3R9 675 aa8.09□□□□□ -1.11
TRPS1-203ENST00000395715 TOR1AIP2Q8NFQ8 470 aa8.09□□□□□ -1.11
TRPS1-203ENST00000395715 PAFAH2Q99487 392 aa8.09□□□□□ -1.11
TRPS1-203ENST00000395715 GRAP2O75791 330 aa8.09□□□□□ -1.11
TRPS1-203ENST00000395715 LRIG2O94898 1065 aa8.09□□□□□ -1.11
TRPS1-203ENST00000395715 SLC16A8O95907 504 aa8.09□□□□□ -1.11
TRPS1-203ENST00000395715 RPA1P27694 616 aa8.09□□□□□ -1.11
TRPS1-203ENST00000395715 PAPD7Q5XG87 772 aaKnown RBP8.09□□□□□ -1.11
TRPS1-203ENST00000395715 SLC34A3Q8N130 599 aa8.09□□□□□ -1.11
TRPS1-203ENST00000395715 ZNF433Q8N7K0 673 aaPredicted RBP8.09□□□□□ -1.11
TRPS1-203ENST00000395715 CASKIN2Q8WXE0 1202 aa8.09□□□□□ -1.11
TRPS1-203ENST00000395715 TMLHEQ9NVH6 421 aa8.09□□□□□ -1.11
TRPS1-203ENST00000395715 SLC39A1Q9NY26 324 aa8.09□□□□□ -1.11
TRPS1-203ENST00000395715 PRKAA2P54646 552 aa8.09□□□□□ -1.11
TRPS1-203ENST00000395715 ACTR3P61158 418 aa8.09□□□□□ -1.11
TRPS1-203ENST00000395715 STILQ15468 1287 aa8.09□□□□□ -1.11
TRPS1-203ENST00000395715 NAB2Q15742 525 aa8.09□□□□□ -1.11
TRPS1-203ENST00000395715 TOR1AIP1Q5JTV8 583 aa8.09□□□□□ -1.11
TRPS1-203ENST00000395715 TCEAL6Q6IPX3 200 aa8.09□□□□□ -1.11
TRPS1-203ENST00000395715 PDPRQ8NCN5 879 aa8.09□□□□□ -1.11
TRPS1-203ENST00000395715 SPATA5L1Q9BVQ7 753 aa8.09□□□□□ -1.11
TRPS1-203ENST00000395715 SCAF8Q9UPN6 1271 aaKnown RBP8.09□□□□□ -1.11
TRPS1-203ENST00000395715 MCIDASD6RGH6 385 aa8.09□□□□□ -1.12
TRPS1-203ENST00000395715 CYP2A7P20853 494 aa8.09□□□□□ -1.12
TRPS1-203ENST00000395715 COMTP21964 271 aa8.09□□□□□ -1.12
TRPS1-203ENST00000395715 FUKQ8N0W3 1084 aa8.09□□□□□ -1.12
TRPS1-203ENST00000395715 NXNL1Q96CM4 212 aa8.09□□□□□ -1.12
TRPS1-203ENST00000395715 RNF31Q96EP0 1072 aa8.09□□□□□ -1.12
TRPS1-203ENST00000395715 CDH19Q9H159 772 aa8.09□□□□□ -1.12
TRPS1-203ENST00000395715 NOL11Q9H8H0 719 aaKnown RBP8.09□□□□□ -1.12
TRPS1-203ENST00000395715 CORO2BQ9UQ03 480 aa8.09□□□□□ -1.12
TRPS1-203ENST00000395715 A0A075B6Q4 140 aa8.08□□□□□ -1.12
TRPS1-203ENST00000395715 CLDN25C9JDP6 229 aa8.08□□□□□ -1.12
TRPS1-203ENST00000395715 CLPXO76031 633 aa8.08□□□□□ -1.12
TRPS1-203ENST00000395715 MAPK7Q13164 816 aa8.08□□□□□ -1.12
TRPS1-203ENST00000395715 ALG10Q5BKT4 473 aa8.08□□□□□ -1.12
TRPS1-203ENST00000395715 SLC16A9Q7RTY1 509 aa8.08□□□□□ -1.12
TRPS1-203ENST00000395715 LHFPL3Q86UP9 236 aa8.08□□□□□ -1.12
TRPS1-203ENST00000395715 SENP6Q9GZR1 1112 aaPredicted RBP8.08□□□□□ -1.12
TRPS1-203ENST00000395715 ZFYVE28Q9HCC9 887 aa8.08□□□□□ -1.12
TRPS1-203ENST00000395715 TM9SF3Q9HD45 589 aa8.08□□□□□ -1.12
TRPS1-203ENST00000395715 PDGFCQ9NRA1 345 aa8.08□□□□□ -1.12
TRPS1-203ENST00000395715 ZNF69Q9UC07 566 aa8.08□□□□□ -1.12
TRPS1-203ENST00000395715 PRR12Q9ULL5 1215 aa8.08□□□□□ -1.12
TRPS1-203ENST00000395715 ZFYVE9O95405 1425 aa8.08□□□□□ -1.12
TRPS1-203ENST00000395715 TGM6O95932 706 aa8.08□□□□□ -1.12
TRPS1-203ENST00000395715 MATKP42679 507 aa8.08□□□□□ -1.12
TRPS1-203ENST00000395715 PDX1P52945 283 aa8.08□□□□□ -1.12
TRPS1-203ENST00000395715 PKNOX1P55347 436 aa8.08□□□□□ -1.12
TRPS1-203ENST00000395715 C1QBPQ07021 282 aaKnown RBP8.08□□□□□ -1.12
TRPS1-203ENST00000395715 ABCA11PQ4W5N1 156 aa8.08□□□□□ -1.12
TRPS1-203ENST00000395715 TFDP3Q5H9I0 405 aa8.08□□□□□ -1.12
TRPS1-203ENST00000395715 TMPRSS11AQ6ZMR5 421 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms