RNA–Protein interactions for RNA: ENST00000394991.7

SNCA-205, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-205ENST00000394991 TMIEQ8NEW7 156 aa16.2■□□□□ 0.18
SNCA-205ENST00000394991 STK32AQ8WU08 396 aa16.2■□□□□ 0.18
SNCA-205ENST00000394991 CCDC97Q96F63 343 aaPredicted RBP16.2■□□□□ 0.18
SNCA-205ENST00000394991 PPP1R9BQ96SB3 815 aa16.2■□□□□ 0.18
SNCA-205ENST00000394991 THAP9Q9H5L6 903 aa16.2■□□□□ 0.18
SNCA-205ENST00000394991 METTL14Q9HCE5 456 aaKnown RBP16.2■□□□□ 0.18
SNCA-205ENST00000394991 DDIT4Q9NX09 232 aa16.2■□□□□ 0.18
SNCA-205ENST00000394991 COX16Q9P0S2 106 aa16.2■□□□□ 0.18
SNCA-205ENST00000394991 SLC12A6Q9UHW9 1150 aa16.2■□□□□ 0.18
SNCA-205ENST00000394991 SPTY2D1-AS1A0A0U1RR47 76 aa16.19■□□□□ 0.18
SNCA-205ENST00000394991 EME2A4GXA9 379 aaPredicted RBP16.19■□□□□ 0.18
SNCA-205ENST00000394991 PMM2O15305 246 aa16.19■□□□□ 0.18
SNCA-205ENST00000394991 EFSO43281 561 aa16.19■□□□□ 0.18
SNCA-205ENST00000394991 ZNF202O95125 648 aa16.19■□□□□ 0.18
SNCA-205ENST00000394991 RRM1P23921 792 aa16.19■□□□□ 0.18
SNCA-205ENST00000394991 CCR1P32246 355 aa16.19■□□□□ 0.18
SNCA-205ENST00000394991 CSRP3P50461 194 aa16.19■□□□□ 0.18
SNCA-205ENST00000394991 C1QBPQ07021 282 aaKnown RBP16.19■□□□□ 0.18
SNCA-205ENST00000394991 NFATC3Q12968 1075 aa16.19■□□□□ 0.18
SNCA-205ENST00000394991 DEFB133Q30KQ1 61 aa16.19■□□□□ 0.18
SNCA-205ENST00000394991 ZSCAN23Q3MJ62 389 aa16.19■□□□□ 0.18
SNCA-205ENST00000394991 COBLL1Q53SF7 1204 aa16.19■□□□□ 0.18
SNCA-205ENST00000394991 FOXR1Q6PIV2 292 aa16.19■□□□□ 0.18
SNCA-205ENST00000394991 RBM44Q6ZP01 1051 aaKnown RBP16.19■□□□□ 0.18
SNCA-205ENST00000394991 DCP2Q8IU60 420 aaKnown RBP16.19■□□□□ 0.18
SNCA-205ENST00000394991 DEFB106AQ8N104 65 aa16.19■□□□□ 0.18
SNCA-205ENST00000394991 GRIN3AQ8TCU5 1115 aa16.19■□□□□ 0.18
SNCA-205ENST00000394991 GRAMD1AQ96CP6 724 aa16.19■□□□□ 0.18
SNCA-205ENST00000394991 SLC2A13Q96QE2 648 aa16.19■□□□□ 0.18
SNCA-205ENST00000394991 HDAC8Q9BY41 377 aa16.19■□□□□ 0.18
SNCA-205ENST00000394991 DYRK4Q9NR20 520 aa16.19■□□□□ 0.18
SNCA-205ENST00000394991 VPS51Q9UID3 782 aa16.19■□□□□ 0.18
SNCA-205ENST00000394991 CNTN6Q9UQ52 1028 aa16.19■□□□□ 0.18
SNCA-205ENST00000394991 TBC1D30Q9Y2I9 924 aa16.19■□□□□ 0.18
SNCA-205ENST00000394991 HS3ST4Q9Y661 456 aa16.19■□□□□ 0.18
SNCA-205ENST00000394991 HS3ST3A1Q9Y663 406 aa16.19■□□□□ 0.18
SNCA-205ENST00000394991 CSNK1G3Q9Y6M4 447 aa16.19■□□□□ 0.18
SNCA-205ENST00000394991 SPINT1O43278 529 aa16.18■□□□□ 0.18
SNCA-205ENST00000394991 AQP9O43315 295 aa16.18■□□□□ 0.18
SNCA-205ENST00000394991 CNTN5O94779 1100 aa16.18■□□□□ 0.18
SNCA-205ENST00000394991 TNFSF15O95150 251 aa16.18■□□□□ 0.18
SNCA-205ENST00000394991 PRNPP04156 253 aa16.18■□□□□ 0.18
SNCA-205ENST00000394991 SLC2A3P11169 496 aa16.18■□□□□ 0.18
SNCA-205ENST00000394991 CDK17Q00537 523 aa16.18■□□□□ 0.18
SNCA-205ENST00000394991 GCNT1Q02742 428 aa16.18■□□□□ 0.18
SNCA-205ENST00000394991 ARL13BQ3SXY8 428 aa16.18■□□□□ 0.18
SNCA-205ENST00000394991 LINC00303Q3SY05 128 aa16.18■□□□□ 0.18
SNCA-205ENST00000394991 C5orf22Q49AR2 442 aa16.18■□□□□ 0.18
SNCA-205ENST00000394991 ARSIQ5FYB1 569 aa16.18■□□□□ 0.18
SNCA-205ENST00000394991 ZNF658Q5TYW1 1059 aaPredicted RBP16.18■□□□□ 0.18
SNCA-205ENST00000394991 PARGQ86W56 976 aa16.18■□□□□ 0.18
SNCA-205ENST00000394991 ATP11CQ8NB49 1132 aa16.18■□□□□ 0.18
SNCA-205ENST00000394991 FAM174AQ8TBP5 190 aa16.18■□□□□ 0.18
SNCA-205ENST00000394991 RNF34Q969K3 372 aa16.18■□□□□ 0.18
SNCA-205ENST00000394991 MUC3BQ9H195 1237 aa16.18■□□□□ 0.18
SNCA-205ENST00000394991 TNKS2Q9H2K2 1166 aa16.18■□□□□ 0.18
SNCA-205ENST00000394991 SALL4Q9UJQ4 1053 aa16.18■□□□□ 0.18
SNCA-205ENST00000394991 FARP1Q9Y4F1 1045 aaPredicted RBP16.18■□□□□ 0.18
SNCA-205ENST00000394991 WASF2Q9Y6W5 498 aa16.18■□□□□ 0.18
SNCA-205ENST00000394991 FLNCQ14315 2725 aa16.18■□□□□ 0.18
SNCA-205ENST00000394991 LRP4O75096 1905 aa16.17■□□□□ 0.18
SNCA-205ENST00000394991 CHD5Q8TDI0 1954 aa16.17■□□□□ 0.18
SNCA-205ENST00000394991 UNC13CQ8NB66 2214 aa16.17■□□□□ 0.18
SNCA-205ENST00000394991 A0A1W2PQ27 194 aa16.17■□□□□ 0.18
SNCA-205ENST00000394991 A0A1W2PQ64 194 aa16.17■□□□□ 0.18
SNCA-205ENST00000394991 H3BM21 787 aa16.17■□□□□ 0.18
SNCA-205ENST00000394991 CLDN11O75508 207 aa16.17■□□□□ 0.18
SNCA-205ENST00000394991 TCEA3O75764 348 aa16.17■□□□□ 0.18
SNCA-205ENST00000394991 PAK4O96013 591 aaPredicted RBP16.17■□□□□ 0.18
SNCA-205ENST00000394991 KRT85P78386 507 aa16.17■□□□□ 0.18
SNCA-205ENST00000394991 LRRC63Q05C16 580 aa16.17■□□□□ 0.18
SNCA-205ENST00000394991 SRSF1Q07955 248 aaKnown RBP eCLIP16.17■□□□□ 0.18
SNCA-205ENST00000394991 CCDC15Q0P6D6 951 aa16.17■□□□□ 0.18
SNCA-205ENST00000394991 EIF2B5Q13144 721 aaKnown RBP16.17■□□□□ 0.18
SNCA-205ENST00000394991 NR0B2Q15466 257 aa16.17■□□□□ 0.18
SNCA-205ENST00000394991 MEA1Q16626 185 aa16.17■□□□□ 0.18
SNCA-205ENST00000394991 ALFQ53S48 1182 aa16.17■□□□□ 0.18
SNCA-205ENST00000394991 C22orf39Q6P5X5 142 aa16.17■□□□□ 0.18
SNCA-205ENST00000394991 LINGO4Q6UY18 593 aa16.17■□□□□ 0.18
SNCA-205ENST00000394991 SLC35F3Q8IY50 421 aa16.17■□□□□ 0.18
SNCA-205ENST00000394991 RBFAQ8N0V3 343 aa16.17■□□□□ 0.18
SNCA-205ENST00000394991 WDR36Q8NI36 951 aaKnown RBP16.17■□□□□ 0.18
SNCA-205ENST00000394991 LMX1AQ8TE12 382 aa16.17■□□□□ 0.18
SNCA-205ENST00000394991 CCDC114Q96M63 670 aa16.17■□□□□ 0.18
SNCA-205ENST00000394991 MED15Q96RN5 788 aa16.17■□□□□ 0.18
SNCA-205ENST00000394991 CCNL2Q96S94 520 aaPredicted RBP16.17■□□□□ 0.18
SNCA-205ENST00000394991 KLF6Q99612 283 aaPredicted RBP16.17■□□□□ 0.18
SNCA-205ENST00000394991 SLC17A9Q9BYT1 436 aa16.17■□□□□ 0.18
SNCA-205ENST00000394991 TCEAL2Q9H3H9 227 aaPredicted RBP16.17■□□□□ 0.18
SNCA-205ENST00000394991 ACP6Q9NPH0 428 aa16.17■□□□□ 0.18
SNCA-205ENST00000394991 IL36AQ9UHA7 158 aa16.17■□□□□ 0.18
SNCA-205ENST00000394991 IL17BQ9UHF5 180 aa16.17■□□□□ 0.18
SNCA-205ENST00000394991 LRRK1Q38SD2 2015 aa16.17■□□□□ 0.18
SNCA-205ENST00000394991 TERTO14746 1132 aaKnown RBP16.16■□□□□ 0.18
SNCA-205ENST00000394991 MUSKO15146 869 aa16.16■□□□□ 0.18
SNCA-205ENST00000394991 PAGE1O75459 146 aa16.16■□□□□ 0.18
SNCA-205ENST00000394991 LEFTY1O75610 366 aa16.16■□□□□ 0.18
SNCA-205ENST00000394991 GRAP2O75791 330 aa16.16■□□□□ 0.18
SNCA-205ENST00000394991 RHOCP08134 193 aa16.16■□□□□ 0.18
SNCA-205ENST00000394991 KRT5P13647 590 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms