RNA–Protein interactions for RNA: ENST00000394803.9

UBE2D3-208, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,227 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-208ENST00000394803 STMN1P16949 149 aa10.19□□□□□ -0.78
UBE2D3-208ENST00000394803 ERCC2P18074 760 aa10.19□□□□□ -0.78
UBE2D3-208ENST00000394803 GRIA2P42262 883 aa10.19□□□□□ -0.78
UBE2D3-208ENST00000394803 CSRP3P50461 194 aa10.19□□□□□ -0.78
UBE2D3-208ENST00000394803 TKTL1P51854 596 aa10.19□□□□□ -0.78
UBE2D3-208ENST00000394803 SLC12A2P55011 1212 aa10.19□□□□□ -0.78
UBE2D3-208ENST00000394803 RAB10P61026 200 aa10.19□□□□□ -0.78
UBE2D3-208ENST00000394803 GALNT2Q10471 571 aa10.19□□□□□ -0.78
UBE2D3-208ENST00000394803 SQLEQ14534 574 aa10.19□□□□□ -0.78
UBE2D3-208ENST00000394803 ARL13AQ5H913 290 aaPredicted RBP10.19□□□□□ -0.78
UBE2D3-208ENST00000394803 CES3Q6UWW8 571 aa10.19□□□□□ -0.78
UBE2D3-208ENST00000394803 FASTKD5Q7L8L6 764 aaKnown RBP10.19□□□□□ -0.78
UBE2D3-208ENST00000394803 ZC3HC1Q86WB0 502 aaKnown RBP10.19□□□□□ -0.78
UBE2D3-208ENST00000394803 ERO1BQ86YB8 467 aa10.19□□□□□ -0.78
UBE2D3-208ENST00000394803 CNTN4Q8IWV2 1026 aa10.19□□□□□ -0.78
UBE2D3-208ENST00000394803 B3GALNT2Q8NCR0 500 aa10.19□□□□□ -0.78
UBE2D3-208ENST00000394803 PPHLN1Q8NEY8 458 aaKnown RBP10.19□□□□□ -0.78
UBE2D3-208ENST00000394803 MIPOL1Q8TD10 442 aa10.19□□□□□ -0.78
UBE2D3-208ENST00000394803 PBXIP1Q96AQ6 731 aa10.19□□□□□ -0.78
UBE2D3-208ENST00000394803 PPP1R14BQ96C90 147 aa10.19□□□□□ -0.78
UBE2D3-208ENST00000394803 NMD3Q96D46 503 aaKnown RBP10.19□□□□□ -0.78
UBE2D3-208ENST00000394803 PGAP3Q96FM1 320 aaPredicted RBP10.19□□□□□ -0.78
UBE2D3-208ENST00000394803 ATXN7L3BQ96GX2 97 aa10.19□□□□□ -0.78
UBE2D3-208ENST00000394803 CNBD2Q96M20 576 aa10.19□□□□□ -0.78
UBE2D3-208ENST00000394803 PPP1R16BQ96T49 567 aa10.19□□□□□ -0.78
UBE2D3-208ENST00000394803 AGAP2Q99490 1192 aa10.19□□□□□ -0.78
UBE2D3-208ENST00000394803 MRPL57Q9BQC6 102 aaKnown RBP10.19□□□□□ -0.78
UBE2D3-208ENST00000394803 NUF2Q9BZD4 464 aa10.19□□□□□ -0.78
UBE2D3-208ENST00000394803 MRPL46Q9H2W6 279 aaKnown RBP10.19□□□□□ -0.78
UBE2D3-208ENST00000394803 CLIC5Q9NZA1 410 aa10.19□□□□□ -0.78
UBE2D3-208ENST00000394803 PDCD11Q14690 1871 aaKnown RBP10.19□□□□□ -0.78
UBE2D3-208ENST00000394803 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.19□□□□□ -0.78
UBE2D3-208ENST00000394803 H3BRB1 525 aa10.19□□□□□ -0.78
UBE2D3-208ENST00000394803 KCNK1O00180 336 aa10.19□□□□□ -0.78
UBE2D3-208ENST00000394803 CFLARO15519 480 aa10.19□□□□□ -0.78
UBE2D3-208ENST00000394803 ADCY6O43306 1168 aa10.19□□□□□ -0.78
UBE2D3-208ENST00000394803 GRID2O43424 1007 aa10.19□□□□□ -0.78
UBE2D3-208ENST00000394803 VAPBO95292 243 aa10.19□□□□□ -0.78
UBE2D3-208ENST00000394803 PGM3O95394 542 aa10.19□□□□□ -0.78
UBE2D3-208ENST00000394803 TFAP2AP05549 437 aa10.19□□□□□ -0.78
UBE2D3-208ENST00000394803 PDGFRBP09619 1106 aa10.19□□□□□ -0.78
UBE2D3-208ENST00000394803 XRCC1P18887 633 aaPredicted RBP10.19□□□□□ -0.78
UBE2D3-208ENST00000394803 EPHA3P29320 983 aa10.19□□□□□ -0.78
UBE2D3-208ENST00000394803 CYP2C18P33260 490 aa10.19□□□□□ -0.78
UBE2D3-208ENST00000394803 HTR7P34969 479 aa10.19□□□□□ -0.78
UBE2D3-208ENST00000394803 NAGLUP54802 743 aa10.19□□□□□ -0.78
UBE2D3-208ENST00000394803 IRF9Q00978 393 aa10.19□□□□□ -0.78
UBE2D3-208ENST00000394803 NME3Q13232 169 aa10.19□□□□□ -0.78
UBE2D3-208ENST00000394803 APOFQ13790 326 aa10.19□□□□□ -0.78
UBE2D3-208ENST00000394803 GRIK4Q16099 956 aa10.19□□□□□ -0.78
UBE2D3-208ENST00000394803 ALKAL1Q6UXT8 129 aa10.19□□□□□ -0.78
UBE2D3-208ENST00000394803 LIMS2Q7Z4I7 341 aa10.19□□□□□ -0.78
UBE2D3-208ENST00000394803 EME1Q96AY2 570 aa10.19□□□□□ -0.78
UBE2D3-208ENST00000394803 C18orf25Q96B23 403 aaPredicted RBP10.19□□□□□ -0.78
UBE2D3-208ENST00000394803 DUS3LQ96G46 650 aaKnown RBP10.19□□□□□ -0.78
UBE2D3-208ENST00000394803 MAELQ96JY0 434 aaKnown RBP10.19□□□□□ -0.78
UBE2D3-208ENST00000394803 TEKT5Q96M29 485 aa10.19□□□□□ -0.78
UBE2D3-208ENST00000394803 CATSPER2Q96P56 530 aa10.19□□□□□ -0.78
UBE2D3-208ENST00000394803 C1QTNF1Q9BXJ1 281 aa10.19□□□□□ -0.78
UBE2D3-208ENST00000394803 TRIM15Q9C019 465 aa10.19□□□□□ -0.78
UBE2D3-208ENST00000394803 UNC93B1Q9H1C4 597 aa10.19□□□□□ -0.78
UBE2D3-208ENST00000394803 TUT1Q9H6E5 874 aaKnown RBP10.19□□□□□ -0.78
UBE2D3-208ENST00000394803 WDR55Q9H6Y2 383 aaPredicted RBP10.19□□□□□ -0.78
UBE2D3-208ENST00000394803 COPS7BQ9H9Q2 264 aaPredicted RBP10.19□□□□□ -0.78
UBE2D3-208ENST00000394803 C8orf4Q9NR00 106 aa10.19□□□□□ -0.78
UBE2D3-208ENST00000394803 PIH1D1Q9NWS0 290 aaKnown RBP10.19□□□□□ -0.78
UBE2D3-208ENST00000394803 GPRC5DQ9NZD1 345 aa10.19□□□□□ -0.78
UBE2D3-208ENST00000394803 FBXW11Q9UKB1 542 aa10.19□□□□□ -0.78
UBE2D3-208ENST00000394803 FZD1Q9UP38 647 aa10.19□□□□□ -0.78
UBE2D3-208ENST00000394803 BRCA1P38398 1863 aaKnown RBP10.19□□□□□ -0.78
UBE2D3-208ENST00000394803 SCN1AP35498 2009 aa10.19□□□□□ -0.78
UBE2D3-208ENST00000394803 RBM47A0AV96 593 aaKnown RBP10.18□□□□□ -0.78
UBE2D3-208ENST00000394803 SORBS2O94875 1100 aaKnown RBP10.18□□□□□ -0.78
UBE2D3-208ENST00000394803 C8BP07358 591 aa10.18□□□□□ -0.78
UBE2D3-208ENST00000394803 CHRNGP07510 517 aa10.18□□□□□ -0.78
UBE2D3-208ENST00000394803 FAM200BP0CF97 657 aa10.18□□□□□ -0.78
UBE2D3-208ENST00000394803 KCNE1P15382 129 aa10.18□□□□□ -0.78
UBE2D3-208ENST00000394803 NFKB1P19838 968 aa10.18□□□□□ -0.78
UBE2D3-208ENST00000394803 ATP5F1P24539 256 aaPredicted RBP10.18□□□□□ -0.78
UBE2D3-208ENST00000394803 TUBA4AP68366 448 aa10.18□□□□□ -0.78
UBE2D3-208ENST00000394803 POU4F1Q01851 419 aa10.18□□□□□ -0.78
UBE2D3-208ENST00000394803 NSUN2Q08J23 767 aaKnown RBP eCLIP10.18□□□□□ -0.78
UBE2D3-208ENST00000394803 SEMA3BQ13214 749 aa10.18□□□□□ -0.78
UBE2D3-208ENST00000394803 PEX6Q13608 980 aa10.18□□□□□ -0.78
UBE2D3-208ENST00000394803 TRIM25Q14258 630 aaKnown RBP10.18□□□□□ -0.78
UBE2D3-208ENST00000394803 GRM3Q14832 879 aa10.18□□□□□ -0.78
UBE2D3-208ENST00000394803 NADK2Q4G0N4 442 aa10.18□□□□□ -0.78
UBE2D3-208ENST00000394803 KLHDC10Q6PID8 442 aa10.18□□□□□ -0.78
UBE2D3-208ENST00000394803 POTEHQ6S545 545 aa10.18□□□□□ -0.78
UBE2D3-208ENST00000394803 HACD2Q6Y1H2 254 aa10.18□□□□□ -0.78
UBE2D3-208ENST00000394803 ATG14Q6ZNE5 492 aa10.18□□□□□ -0.78
UBE2D3-208ENST00000394803 KLHDC8BQ8IXV7 354 aa10.18□□□□□ -0.78
UBE2D3-208ENST00000394803 TMEM130Q8N3G9 435 aa10.18□□□□□ -0.78
UBE2D3-208ENST00000394803 CNKSR2Q8WXI2 1034 aa10.18□□□□□ -0.78
UBE2D3-208ENST00000394803 MFSD3Q96ES6 412 aa10.18□□□□□ -0.78
UBE2D3-208ENST00000394803 TSPAN17Q96FV3 270 aa10.18□□□□□ -0.78
UBE2D3-208ENST00000394803 FAM210AQ96ND0 272 aa10.18□□□□□ -0.78
UBE2D3-208ENST00000394803 TSGA13Q96PP4 275 aa10.18□□□□□ -0.78
UBE2D3-208ENST00000394803 OXCT2Q9BYC2 517 aaPredicted RBP10.18□□□□□ -0.78
UBE2D3-208ENST00000394803 CEP41Q9BYV8 373 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms