RNA–Protein interactions for RNA: ENST00000394609.6

RTN4-205, Transcript of reticulon 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN4, Length 1,898 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-205ENST00000394609 GKN1Q9NS71 199 aa7.09□□□□□ -1.27
RTN4-205ENST00000394609 COMMD8Q9NX08 183 aa7.09□□□□□ -1.27
RTN4-205ENST00000394609 ETAA1Q9NY74 926 aa7.09□□□□□ -1.27
RTN4-205ENST00000394609 C2orf78A6NCI8 922 aa7.09□□□□□ -1.28
RTN4-205ENST00000394609 HIDE1A8MVS5 230 aa7.09□□□□□ -1.28
RTN4-205ENST00000394609 NDC80O14777 642 aa7.09□□□□□ -1.28
RTN4-205ENST00000394609 RASGRF2O14827 1237 aa7.09□□□□□ -1.28
RTN4-205ENST00000394609 SCAMP3O14828 347 aaKnown RBP7.09□□□□□ -1.28
RTN4-205ENST00000394609 CHADO15335 359 aa7.09□□□□□ -1.28
RTN4-205ENST00000394609 NCAM2O15394 837 aa7.09□□□□□ -1.28
RTN4-205ENST00000394609 CNTN5O94779 1100 aa7.09□□□□□ -1.28
RTN4-205ENST00000394609 ANP32DO95626 131 aa7.09□□□□□ -1.28
RTN4-205ENST00000394609 JCHAINP01591 159 aa7.09□□□□□ -1.28
RTN4-205ENST00000394609 VIMP08670 466 aaKnown RBP7.09□□□□□ -1.28
RTN4-205ENST00000394609 PTPN3P26045 913 aa7.09□□□□□ -1.28
RTN4-205ENST00000394609 PSMB4P28070 264 aa7.09□□□□□ -1.28
RTN4-205ENST00000394609 SSTR1P30872 391 aa7.09□□□□□ -1.28
RTN4-205ENST00000394609 CTNNB1P35222 781 aa7.09□□□□□ -1.28
RTN4-205ENST00000394609 SERPINB6P35237 376 aa7.09□□□□□ -1.28
RTN4-205ENST00000394609 GRIA1P42261 906 aa7.09□□□□□ -1.28
RTN4-205ENST00000394609 CCNHP51946 323 aaPredicted RBP7.09□□□□□ -1.28
RTN4-205ENST00000394609 EPHB3P54753 998 aa7.09□□□□□ -1.28
RTN4-205ENST00000394609 PPIDQ08752 370 aaKnown RBP7.09□□□□□ -1.28
RTN4-205ENST00000394609 ZBTB17Q13105 803 aa7.09□□□□□ -1.28
RTN4-205ENST00000394609 ALFQ53S48 1182 aa7.09□□□□□ -1.28
RTN4-205ENST00000394609 NAIF1Q69YI7 327 aaPredicted RBP7.09□□□□□ -1.28
RTN4-205ENST00000394609 FBXL22Q6P050 247 aa7.09□□□□□ -1.28
RTN4-205ENST00000394609 PSRC1Q6PGN9 363 aaPredicted RBP7.09□□□□□ -1.28
RTN4-205ENST00000394609 RELL1Q8IUW5 271 aa7.09□□□□□ -1.28
RTN4-205ENST00000394609 IGDCC3Q8IVU1 814 aa7.09□□□□□ -1.28
RTN4-205ENST00000394609 MFN1Q8IWA4 741 aa7.09□□□□□ -1.28
RTN4-205ENST00000394609 ARHGAP12Q8IWW6 846 aa7.09□□□□□ -1.28
RTN4-205ENST00000394609 TCEAL8Q8IYN2 117 aa7.09□□□□□ -1.28
RTN4-205ENST00000394609 ATP6V0D2Q8N8Y2 350 aa7.09□□□□□ -1.28
RTN4-205ENST00000394609 FBXO36Q8NEA4 188 aa7.09□□□□□ -1.28
RTN4-205ENST00000394609 TTC16Q8NEE8 873 aa7.09□□□□□ -1.28
RTN4-205ENST00000394609 PYROXD1Q8WU10 500 aa7.09□□□□□ -1.28
RTN4-205ENST00000394609 ATXN2LQ8WWM7 1075 aaKnown RBP7.09□□□□□ -1.28
RTN4-205ENST00000394609 HERVK_113Q902F9 699 aa7.09□□□□□ -1.28
RTN4-205ENST00000394609 IGSF8Q969P0 613 aa7.09□□□□□ -1.28
RTN4-205ENST00000394609 ACDQ96AP0 544 aa7.09□□□□□ -1.28
RTN4-205ENST00000394609 MRRFQ96E11 262 aaKnown RBP7.09□□□□□ -1.28
RTN4-205ENST00000394609 SPDL1Q96EA4 605 aa7.09□□□□□ -1.28
RTN4-205ENST00000394609 MYEOVQ96EZ4 313 aa7.09□□□□□ -1.28
RTN4-205ENST00000394609 BTN2A3PQ96KV6 586 aa7.09□□□□□ -1.28
RTN4-205ENST00000394609 C1orf74Q96LT6 269 aa7.09□□□□□ -1.28
RTN4-205ENST00000394609 MYRFLQ96LU7 910 aa7.09□□□□□ -1.28
RTN4-205ENST00000394609 SERPINB12Q96P63 405 aa7.09□□□□□ -1.28
RTN4-205ENST00000394609 CYP2S1Q96SQ9 504 aa7.09□□□□□ -1.28
RTN4-205ENST00000394609 SLC39A8Q9C0K1 460 aa7.09□□□□□ -1.28
RTN4-205ENST00000394609 CATSPERBQ9H7T0 1116 aa7.09□□□□□ -1.28
RTN4-205ENST00000394609 TRPC7Q9HCX4 862 aa7.09□□□□□ -1.28
RTN4-205ENST00000394609 PIH1D1Q9NWS0 290 aaKnown RBP7.09□□□□□ -1.28
RTN4-205ENST00000394609 SMPD4Q9NXE4 827 aa7.09□□□□□ -1.28
RTN4-205ENST00000394609 TRPM5Q9NZQ8 1165 aa7.09□□□□□ -1.28
RTN4-205ENST00000394609 KLHL8Q9P2G9 620 aaPredicted RBP7.09□□□□□ -1.28
RTN4-205ENST00000394609 BAIAP2L1Q9UHR4 511 aa7.09□□□□□ -1.28
RTN4-205ENST00000394609 NOVA2Q9UNW9 492 aaKnown RBP7.09□□□□□ -1.28
RTN4-205ENST00000394609 PCDHB11Q9Y5F2 797 aa7.09□□□□□ -1.28
RTN4-205ENST00000394609 INSL5Q9Y5Q6 135 aa7.09□□□□□ -1.28
RTN4-205ENST00000394609 CLUHO75153 1309 aa7.08□□□□□ -1.28
RTN4-205ENST00000394609 GRXCR1A8MXD5 290 aa7.08□□□□□ -1.28
RTN4-205ENST00000394609 FOXO6A8MYZ6 492 aa7.08□□□□□ -1.28
RTN4-205ENST00000394609 TRDMT1O14717 391 aaKnown RBP7.08□□□□□ -1.28
RTN4-205ENST00000394609 FGF10O15520 208 aaPredicted RBP7.08□□□□□ -1.28
RTN4-205ENST00000394609 OPHN1O60890 802 aa7.08□□□□□ -1.28
RTN4-205ENST00000394609 ATP5HO75947 161 aa7.08□□□□□ -1.28
RTN4-205ENST00000394609 SNUPNO95149 360 aaKnown RBP7.08□□□□□ -1.28
RTN4-205ENST00000394609 OAS1P00973 400 aaKnown RBP7.08□□□□□ -1.28
RTN4-205ENST00000394609 IGLV3-27P01718 113 aa7.08□□□□□ -1.28
RTN4-205ENST00000394609 IRF1P10914 325 aa7.08□□□□□ -1.28
RTN4-205ENST00000394609 NQO1P15559 274 aaKnown RBP7.08□□□□□ -1.28
RTN4-205ENST00000394609 DNAJB1P25685 340 aa7.08□□□□□ -1.28
RTN4-205ENST00000394609 HOXC13P31276 330 aa7.08□□□□□ -1.28
RTN4-205ENST00000394609 BMPR1AP36894 532 aa7.08□□□□□ -1.28
RTN4-205ENST00000394609 ELK3P41970 407 aa7.08□□□□□ -1.28
RTN4-205ENST00000394609 GPX6P59796 221 aa7.08□□□□□ -1.28
RTN4-205ENST00000394609 MAGOHP61326 146 aaKnown RBP7.08□□□□□ -1.28
RTN4-205ENST00000394609 IFI35P80217 286 aaPredicted RBP7.08□□□□□ -1.28
RTN4-205ENST00000394609 CCDC15Q0P6D6 951 aa7.08□□□□□ -1.28
RTN4-205ENST00000394609 OLIG2Q13516 323 aa7.08□□□□□ -1.28
RTN4-205ENST00000394609 SPARCL1Q14515 664 aa7.08□□□□□ -1.28
RTN4-205ENST00000394609 LBRQ14739 615 aaKnown RBP7.08□□□□□ -1.28
RTN4-205ENST00000394609 TNFAIP8L3Q5GJ75 292 aa7.08□□□□□ -1.28
RTN4-205ENST00000394609 SPDYAQ5MJ70 313 aa7.08□□□□□ -1.28
RTN4-205ENST00000394609 NADSYN1Q6IA69 706 aa7.08□□□□□ -1.28
RTN4-205ENST00000394609 RFWD3Q6PCD5 774 aa7.08□□□□□ -1.28
RTN4-205ENST00000394609 EP400NLQ6ZTU2 488 aa7.08□□□□□ -1.28
RTN4-205ENST00000394609 CEP128Q6ZU80 1094 aa7.08□□□□□ -1.28
RTN4-205ENST00000394609 C3orf62Q6ZUJ4 267 aa7.08□□□□□ -1.28
RTN4-205ENST00000394609 TMEM150AQ86TG1 271 aa7.08□□□□□ -1.28
RTN4-205ENST00000394609 CAND1Q86VP6 1230 aaKnown RBP7.08□□□□□ -1.28
RTN4-205ENST00000394609 CHSY1Q86X52 802 aa7.08□□□□□ -1.28
RTN4-205ENST00000394609 DENND1CQ8IV53 801 aa7.08□□□□□ -1.28
RTN4-205ENST00000394609 ZNF683Q8IZ20 524 aa7.08□□□□□ -1.28
RTN4-205ENST00000394609 CFAP52Q8N1V2 620 aa7.08□□□□□ -1.28
RTN4-205ENST00000394609 AGGF1Q8N302 714 aaeCLIP7.08□□□□□ -1.28
RTN4-205ENST00000394609 RTL3Q8N8U3 475 aaKnown RBP7.08□□□□□ -1.28
RTN4-205ENST00000394609 PDZD8Q8NEN9 1154 aa7.08□□□□□ -1.28
RTN4-205ENST00000394609 MICAL1Q8TDZ2 1067 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms