RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 RIC8BQ9NVN3 520 aa7.74□□□□□ -1.17
VTI1A-201ENST00000393077 TMEM260Q9NX78 707 aa7.74□□□□□ -1.17
VTI1A-201ENST00000393077 CACNA2D2Q9NY47 1150 aa7.74□□□□□ -1.17
VTI1A-201ENST00000393077 APEX2Q9UBZ4 518 aa7.74□□□□□ -1.17
VTI1A-201ENST00000393077 ZC3H7BQ9UGR2 993 aaKnown RBP7.74□□□□□ -1.17
VTI1A-201ENST00000393077 SHOC2Q9UQ13 582 aa7.74□□□□□ -1.17
VTI1A-201ENST00000393077 BOLA1Q9Y3E2 137 aa7.74□□□□□ -1.17
VTI1A-201ENST00000393077 V9GYQ6 96 aa7.74□□□□□ -1.17
VTI1A-201ENST00000393077 POLRMTO00411 1230 aaKnown RBP7.73□□□□□ -1.17
VTI1A-201ENST00000393077 TRIM38O00635 465 aa7.73□□□□□ -1.17
VTI1A-201ENST00000393077 LZTS3O60299 673 aaPredicted RBP7.73□□□□□ -1.17
VTI1A-201ENST00000393077 XRCC1P18887 633 aaPredicted RBP7.73□□□□□ -1.17
VTI1A-201ENST00000393077 AOC1P19801 751 aa7.73□□□□□ -1.17
VTI1A-201ENST00000393077 ENPP1P22413 925 aa7.73□□□□□ -1.17
VTI1A-201ENST00000393077 MMP8P22894 467 aa7.73□□□□□ -1.17
VTI1A-201ENST00000393077 GRIK1P39086 918 aa7.73□□□□□ -1.17
VTI1A-201ENST00000393077 ALDH3B2P48448 385 aa7.73□□□□□ -1.17
VTI1A-201ENST00000393077 EVX2Q03828 476 aa7.73□□□□□ -1.17
VTI1A-201ENST00000393077 NFIAQ12857 509 aa7.73□□□□□ -1.17
VTI1A-201ENST00000393077 FAPQ12884 760 aa7.73□□□□□ -1.17
VTI1A-201ENST00000393077 KLF10Q13118 480 aa7.73□□□□□ -1.17
VTI1A-201ENST00000393077 GRM1Q13255 1194 aa7.73□□□□□ -1.17
VTI1A-201ENST00000393077 COG2Q14746 738 aa7.73□□□□□ -1.17
VTI1A-201ENST00000393077 PLEKHG6Q3KR16 790 aa7.73□□□□□ -1.17
VTI1A-201ENST00000393077 ZIK1Q3SY52 487 aaPredicted RBP7.73□□□□□ -1.17
VTI1A-201ENST00000393077 SBK1Q52WX2 424 aa7.73□□□□□ -1.17
VTI1A-201ENST00000393077 CCBE1Q6UXH8 406 aaPredicted RBP7.73□□□□□ -1.17
VTI1A-201ENST00000393077 LUZP2Q86TE4 346 aa7.73□□□□□ -1.17
VTI1A-201ENST00000393077 PCDH20Q8N6Y1 951 aaKnown RBP7.73□□□□□ -1.17
VTI1A-201ENST00000393077 CCDC185Q8N715 623 aa7.73□□□□□ -1.17
VTI1A-201ENST00000393077 LEMD2Q8NC56 503 aa7.73□□□□□ -1.17
VTI1A-201ENST00000393077 DPF3Q92784 378 aa7.73□□□□□ -1.17
VTI1A-201ENST00000393077 SH3YL1Q96HL8 342 aaPredicted RBP7.73□□□□□ -1.17
VTI1A-201ENST00000393077 TMEM117Q9H0C3 514 aa7.73□□□□□ -1.17
VTI1A-201ENST00000393077 NTN4Q9HB63 628 aa7.73□□□□□ -1.17
VTI1A-201ENST00000393077 THG1LQ9NWX6 298 aaKnown RBP7.73□□□□□ -1.17
VTI1A-201ENST00000393077 MAP3K20Q9NYL2 800 aaKnown RBP7.73□□□□□ -1.17
VTI1A-201ENST00000393077 A0A0G2JPF8 293 aa7.73□□□□□ -1.17
VTI1A-201ENST00000393077 HNRNPCL3B7ZW38 293 aa7.73□□□□□ -1.17
VTI1A-201ENST00000393077 HNRNPCL4P0DMR1 293 aa7.73□□□□□ -1.17
VTI1A-201ENST00000393077 POLR2BP30876 1174 aaKnown RBP7.73□□□□□ -1.17
VTI1A-201ENST00000393077 SOX6P35712 828 aa7.73□□□□□ -1.17
VTI1A-201ENST00000393077 MLLT3P42568 568 aaPredicted RBP7.73□□□□□ -1.17
VTI1A-201ENST00000393077 GDI2P50395 445 aaKnown RBP7.73□□□□□ -1.17
VTI1A-201ENST00000393077 CDKL1Q00532 357 aa7.73□□□□□ -1.17
VTI1A-201ENST00000393077 TAP1Q03518 808 aa7.73□□□□□ -1.17
VTI1A-201ENST00000393077 GALNT1Q10472 559 aaPredicted RBP7.73□□□□□ -1.17
VTI1A-201ENST00000393077 IRF5Q13568 498 aa7.73□□□□□ -1.17
VTI1A-201ENST00000393077 TBRG1Q3YBR2 411 aa7.73□□□□□ -1.17
VTI1A-201ENST00000393077 DCAF12L1Q5VU92 463 aa7.73□□□□□ -1.17
VTI1A-201ENST00000393077 PGM2L1Q6PCE3 622 aa7.73□□□□□ -1.17
VTI1A-201ENST00000393077 KBTBD6Q86V97 674 aa7.73□□□□□ -1.17
VTI1A-201ENST00000393077 DSELQ8IZU8 1212 aa7.73□□□□□ -1.17
VTI1A-201ENST00000393077 SIMC1Q8NDZ2 872 aa7.73□□□□□ -1.17
VTI1A-201ENST00000393077 ENKURQ8TC29 256 aa7.73□□□□□ -1.17
VTI1A-201ENST00000393077 PAWRQ96IZ0 340 aaKnown RBP7.73□□□□□ -1.17
VTI1A-201ENST00000393077 CEP170P1Q96L14 293 aa7.73□□□□□ -1.17
VTI1A-201ENST00000393077 CDADC1Q9BWV3 514 aa7.73□□□□□ -1.17
VTI1A-201ENST00000393077 ACP6Q9NPH0 428 aa7.73□□□□□ -1.17
VTI1A-201ENST00000393077 EHD3Q9NZN3 535 aa7.73□□□□□ -1.17
VTI1A-201ENST00000393077 PNMA8BQ9ULN7 279 aaPredicted RBP7.73□□□□□ -1.17
VTI1A-201ENST00000393077 POLIQ9UNA4 740 aa7.73□□□□□ -1.17
VTI1A-201ENST00000393077 CDYLQ9Y232 598 aa7.73□□□□□ -1.17
VTI1A-201ENST00000393077 SLC27A5Q9Y2P5 690 aa7.73□□□□□ -1.17
VTI1A-201ENST00000393077 NCANO14594 1321 aa7.73□□□□□ -1.17
VTI1A-201ENST00000393077 RGPD2P0DJD1 1756 aa7.73□□□□□ -1.17
VTI1A-201ENST00000393077 SH3D21A4FU49 640 aa7.73□□□□□ -1.17
VTI1A-201ENST00000393077 SNAP29O95721 258 aa7.73□□□□□ -1.17
VTI1A-201ENST00000393077 SERPINE1P05121 402 aa7.73□□□□□ -1.17
VTI1A-201ENST00000393077 FCGR1AP12314 374 aa7.73□□□□□ -1.17
VTI1A-201ENST00000393077 IL1R1P14778 569 aa7.73□□□□□ -1.17
VTI1A-201ENST00000393077 GRIA3P42263 894 aa7.73□□□□□ -1.17
VTI1A-201ENST00000393077 RUNX1T1Q06455 604 aa7.73□□□□□ -1.17
VTI1A-201ENST00000393077 SQLEQ14534 574 aa7.73□□□□□ -1.17
VTI1A-201ENST00000393077 GRM4Q14833 912 aa7.73□□□□□ -1.17
VTI1A-201ENST00000393077 KIF19Q2TAC6 998 aa7.73□□□□□ -1.17
VTI1A-201ENST00000393077 MGAT5BQ3V5L5 792 aa7.73□□□□□ -1.17
VTI1A-201ENST00000393077 CCNYL2Q5T2Q4 361 aa7.73□□□□□ -1.17
VTI1A-201ENST00000393077 ERICH5Q6P6B1 374 aa7.73□□□□□ -1.17
VTI1A-201ENST00000393077 ARCQ7LC44 396 aa7.73□□□□□ -1.17
VTI1A-201ENST00000393077 CHST15Q7LFX5 561 aaPredicted RBP7.73□□□□□ -1.17
VTI1A-201ENST00000393077 RFX6Q8HWS3 928 aa7.73□□□□□ -1.17
VTI1A-201ENST00000393077 SVOPQ8N4V2 548 aa7.73□□□□□ -1.17
VTI1A-201ENST00000393077 CCNYL1Q8N7R7 359 aa7.73□□□□□ -1.17
VTI1A-201ENST00000393077 CIDECQ96AQ7 238 aaPredicted RBP7.73□□□□□ -1.17
VTI1A-201ENST00000393077 SLC39A13Q96H72 371 aa7.73□□□□□ -1.17
VTI1A-201ENST00000393077 HOXD1Q9GZZ0 328 aa7.73□□□□□ -1.17
VTI1A-201ENST00000393077 MIR1-1HGQ9H1L0 117 aa7.73□□□□□ -1.17
VTI1A-201ENST00000393077 MLXQ9UH92 298 aa7.73□□□□□ -1.17
VTI1A-201ENST00000393077 AP3M1Q9Y2T2 418 aa7.73□□□□□ -1.17
VTI1A-201ENST00000393077 MYH11P35749 1972 aa7.73□□□□□ -1.17
VTI1A-201ENST00000393077 FAM25EA8MYX2 175 aa7.72□□□□□ -1.17
VTI1A-201ENST00000393077 HOXC11O43248 304 aaPredicted RBP7.72□□□□□ -1.17
VTI1A-201ENST00000393077 AVILO75366 819 aa7.72□□□□□ -1.17
VTI1A-201ENST00000393077 PDE9AO76083 593 aa7.72□□□□□ -1.17
VTI1A-201ENST00000393077 MAP3K6O95382 1288 aa7.72□□□□□ -1.17
VTI1A-201ENST00000393077 CTRB1P17538 263 aa7.72□□□□□ -1.17
VTI1A-201ENST00000393077 CXCR2P25025 360 aa7.72□□□□□ -1.17
VTI1A-201ENST00000393077 SERPINB9P50453 376 aa7.72□□□□□ -1.17
VTI1A-201ENST00000393077 RACK1P63244 317 aaKnown RBP7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms