RNA–Protein interactions for RNA: ENST00000389373.3

IFT88-203, Transcript of intraflagellar transport 88, humanhuman

TSL 4

Gene IFT88, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-203ENST00000389373 BTN2A3PQ96KV6 586 aa9.88□□□□□ -0.83
IFT88-203ENST00000389373 CCDC114Q96M63 670 aa9.88□□□□□ -0.83
IFT88-203ENST00000389373 GFM1Q96RP9 751 aaKnown RBP9.88□□□□□ -0.83
IFT88-203ENST00000389373 PPP1R9BQ96SB3 815 aa9.88□□□□□ -0.83
IFT88-203ENST00000389373 TCEAL2Q9H3H9 227 aaPredicted RBP9.88□□□□□ -0.83
IFT88-203ENST00000389373 ST7Q9NRC1 585 aa9.88□□□□□ -0.83
IFT88-203ENST00000389373 GEMIN8Q9NWZ8 242 aaKnown RBP9.88□□□□□ -0.83
IFT88-203ENST00000389373 COX16Q9P0S2 106 aa9.88□□□□□ -0.83
IFT88-203ENST00000389373 SIRPGQ9P1W8 387 aa9.88□□□□□ -0.83
IFT88-203ENST00000389373 APOBEC3BQ9UH17 382 aaKnown RBP9.88□□□□□ -0.83
IFT88-203ENST00000389373 MTMR6Q9Y217 621 aa9.88□□□□□ -0.83
IFT88-203ENST00000389373 TRAF3IP3Q9Y228 551 aa9.88□□□□□ -0.83
IFT88-203ENST00000389373 PCDHGA7Q9Y5G6 932 aa9.88□□□□□ -0.83
IFT88-203ENST00000389373 K7ERQ8 282 aa9.87□□□□□ -0.83
IFT88-203ENST00000389373 FPGTO14772 594 aa9.87□□□□□ -0.83
IFT88-203ENST00000389373 SPINT1O43278 529 aa9.87□□□□□ -0.83
IFT88-203ENST00000389373 GCATO75600 419 aa9.87□□□□□ -0.83
IFT88-203ENST00000389373 ENDOD1O94919 500 aa9.87□□□□□ -0.83
IFT88-203ENST00000389373 FBXO21O94952 628 aa9.87□□□□□ -0.83
IFT88-203ENST00000389373 MT-CO1P00395 513 aa9.87□□□□□ -0.83
IFT88-203ENST00000389373 PRNPP04156 253 aa9.87□□□□□ -0.83
IFT88-203ENST00000389373 WT1P19544 449 aaPredicted RBP9.87□□□□□ -0.83
IFT88-203ENST00000389373 ITIH1P19827 911 aa9.87□□□□□ -0.83
IFT88-203ENST00000389373 BRD2P25440 801 aaKnown RBP9.87□□□□□ -0.83
IFT88-203ENST00000389373 RPL13P26373 211 aaKnown RBP9.87□□□□□ -0.83
IFT88-203ENST00000389373 RPS21P63220 83 aaKnown RBP9.87□□□□□ -0.83
IFT88-203ENST00000389373 CENPCQ03188 943 aa9.87□□□□□ -0.83
IFT88-203ENST00000389373 EIF2B5Q13144 721 aaKnown RBP9.87□□□□□ -0.83
IFT88-203ENST00000389373 CUL2Q13617 745 aa9.87□□□□□ -0.83
IFT88-203ENST00000389373 CUL4AQ13619 759 aa9.87□□□□□ -0.83
IFT88-203ENST00000389373 FGL2Q14314 439 aa9.87□□□□□ -0.83
IFT88-203ENST00000389373 NCAPHQ15003 741 aa9.87□□□□□ -0.83
IFT88-203ENST00000389373 C8orf34Q49A92 452 aa9.87□□□□□ -0.83
IFT88-203ENST00000389373 RABGAP1LQ5R372 815 aa9.87□□□□□ -0.83
IFT88-203ENST00000389373 TPRG1LQ5T0D9 272 aa9.87□□□□□ -0.83
IFT88-203ENST00000389373 FAXCQ5TGI0 409 aa9.87□□□□□ -0.83
IFT88-203ENST00000389373 TCERG1LQ5VWI1 586 aa9.87□□□□□ -0.83
IFT88-203ENST00000389373 SYPL2Q5VXT5 272 aa9.87□□□□□ -0.83
IFT88-203ENST00000389373 LCLAT1Q6UWP7 414 aa9.87□□□□□ -0.83
IFT88-203ENST00000389373 SDR16C5Q8N3Y7 309 aa9.87□□□□□ -0.83
IFT88-203ENST00000389373 OR52K2Q8NGK3 314 aa9.87□□□□□ -0.83
IFT88-203ENST00000389373 ZNF564Q8TBZ8 553 aaPredicted RBP9.87□□□□□ -0.83
IFT88-203ENST00000389373 HTR3CQ8WXA8 447 aa9.87□□□□□ -0.83
IFT88-203ENST00000389373 TFAP2BQ92481 460 aa9.87□□□□□ -0.83
IFT88-203ENST00000389373 ALG14Q96F25 216 aa9.87□□□□□ -0.83
IFT88-203ENST00000389373 PAGE5Q96GU1 130 aa9.87□□□□□ -0.83
IFT88-203ENST00000389373 RPRD1AQ96P16 312 aaPredicted RBP9.87□□□□□ -0.83
IFT88-203ENST00000389373 FEM1AQ9BSK4 669 aa9.87□□□□□ -0.83
IFT88-203ENST00000389373 BOCQ9BWV1 1114 aa9.87□□□□□ -0.83
IFT88-203ENST00000389373 CPEB1Q9BZB8 566 aaKnown RBP9.87□□□□□ -0.83
IFT88-203ENST00000389373 MUC3BQ9H195 1237 aa9.87□□□□□ -0.83
IFT88-203ENST00000389373 TNKS2Q9H2K2 1166 aa9.87□□□□□ -0.83
IFT88-203ENST00000389373 KIAA1257Q9ULG3 409 aa9.87□□□□□ -0.83
IFT88-203ENST00000389373 LOXL2Q9Y4K0 774 aa9.87□□□□□ -0.83
IFT88-203ENST00000389373 PCDHB4Q9Y5E5 795 aa9.87□□□□□ -0.83
IFT88-203ENST00000389373 DOPEY2Q9Y3R5 2298 aa9.87□□□□□ -0.83
IFT88-203ENST00000389373 PIEZO2Q9H5I5 2752 aa9.87□□□□□ -0.83
IFT88-203ENST00000389373 COL12A1Q99715 3063 aa9.86□□□□□ -0.83
IFT88-203ENST00000389373 PRAMEF33A0A0G2JMD5 474 aa9.86□□□□□ -0.83
IFT88-203ENST00000389373 TCAF2A6NFQ2 919 aa9.86□□□□□ -0.83
IFT88-203ENST00000389373 IGLON5A6NGN9 336 aa9.86□□□□□ -0.83
IFT88-203ENST00000389373 KCNU1A8MYU2 1149 aa9.86□□□□□ -0.83
IFT88-203ENST00000389373 TMX2-CTNND1H3BSU7 103 aa9.86□□□□□ -0.83
IFT88-203ENST00000389373 NTN3O00634 580 aaPredicted RBP9.86□□□□□ -0.83
IFT88-203ENST00000389373 RIOK3O14730 519 aaKnown RBP9.86□□□□□ -0.83
IFT88-203ENST00000389373 NVLO15381 856 aaKnown RBP9.86□□□□□ -0.83
IFT88-203ENST00000389373 YY2O15391 372 aa9.86□□□□□ -0.83
IFT88-203ENST00000389373 STX10O60499 249 aa9.86□□□□□ -0.83
IFT88-203ENST00000389373 SNAP91O60641 907 aa9.86□□□□□ -0.83
IFT88-203ENST00000389373 PRAMEF10O60809 474 aa9.86□□□□□ -0.83
IFT88-203ENST00000389373 RPLP0P05388 317 aaKnown RBP9.86□□□□□ -0.83
IFT88-203ENST00000389373 SRCP12931 536 aa9.86□□□□□ -0.83
IFT88-203ENST00000389373 RRM1P23921 792 aa9.86□□□□□ -0.83
IFT88-203ENST00000389373 RECQLP46063 649 aaPredicted RBP9.86□□□□□ -0.83
IFT88-203ENST00000389373 ME1P48163 572 aa9.86□□□□□ -0.83
IFT88-203ENST00000389373 DNA2P51530 1060 aa9.86□□□□□ -0.83
IFT88-203ENST00000389373 THOP1P52888 689 aa9.86□□□□□ -0.83
IFT88-203ENST00000389373 KRT83P78385 493 aa9.86□□□□□ -0.83
IFT88-203ENST00000389373 FOXK1P85037 733 aa9.86□□□□□ -0.83
IFT88-203ENST00000389373 EIF3IQ13347 325 aaKnown RBP9.86□□□□□ -0.83
IFT88-203ENST00000389373 NNTQ13423 1086 aa9.86□□□□□ -0.83
IFT88-203ENST00000389373 TMEM259Q4ZIN3 620 aa9.86□□□□□ -0.83
IFT88-203ENST00000389373 DCAF17Q5H9S7 520 aaPredicted RBP9.86□□□□□ -0.83
IFT88-203ENST00000389373 ERICH6BQ5W0A0 696 aa9.86□□□□□ -0.83
IFT88-203ENST00000389373 FBXL22Q6P050 247 aa9.86□□□□□ -0.83
IFT88-203ENST00000389373 TMEM270Q6UE05 265 aa9.86□□□□□ -0.83
IFT88-203ENST00000389373 PHACTR4Q8IZ21 702 aa9.86□□□□□ -0.83
IFT88-203ENST00000389373 FAM26EQ8N5C1 309 aa9.86□□□□□ -0.83
IFT88-203ENST00000389373 Q8N9G6 341 aaPredicted RBP9.86□□□□□ -0.83
IFT88-203ENST00000389373 TMIEQ8NEW7 156 aa9.86□□□□□ -0.83
IFT88-203ENST00000389373 OR2A12Q8NGT7 310 aa9.86□□□□□ -0.83
IFT88-203ENST00000389373 USP7Q93009 1102 aa9.86□□□□□ -0.83
IFT88-203ENST00000389373 CCDC74AQ96AQ1 378 aa9.86□□□□□ -0.83
IFT88-203ENST00000389373 PPP1R16AQ96I34 528 aa9.86□□□□□ -0.83
IFT88-203ENST00000389373 HSFY1Q96LI6 401 aa9.86□□□□□ -0.83
IFT88-203ENST00000389373 TMEM74Q96NL1 305 aa9.86□□□□□ -0.83
IFT88-203ENST00000389373 FUCA2Q9BTY2 467 aa9.86□□□□□ -0.83
IFT88-203ENST00000389373 SLC13A1Q9BZW2 595 aa9.86□□□□□ -0.83
IFT88-203ENST00000389373 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.86□□□□□ -0.83
IFT88-203ENST00000389373 IL36AQ9UHA7 158 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms