RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 SLC4A5Q9BY07 1137 aa7.6□□□□□ -1.19
CDKL5-201ENST00000379989 CPNE5Q9HCH3 593 aa7.6□□□□□ -1.19
CDKL5-201ENST00000379989 SORCS3Q9UPU3 1222 aa7.6□□□□□ -1.19
CDKL5-201ENST00000379989 RIPK3Q9Y572 518 aa7.6□□□□□ -1.19
CDKL5-201ENST00000379989 TANC1Q9C0D5 1861 aa7.6□□□□□ -1.19
CDKL5-201ENST00000379989 TYW5A2RUC4 315 aaKnown RBP7.6□□□□□ -1.19
CDKL5-201ENST00000379989 ANKRD62A6NC57 917 aa7.6□□□□□ -1.19
CDKL5-201ENST00000379989 FAM155AB1AL88 458 aaPredicted RBP7.6□□□□□ -1.19
CDKL5-201ENST00000379989 FSCN2O14926 492 aa7.6□□□□□ -1.19
CDKL5-201ENST00000379989 GAS2O43903 313 aaKnown RBP7.6□□□□□ -1.19
CDKL5-201ENST00000379989 NOL3O60936 208 aaKnown RBP7.6□□□□□ -1.19
CDKL5-201ENST00000379989 RNASEH2AO75792 299 aaKnown RBP7.6□□□□□ -1.19
CDKL5-201ENST00000379989 ZMPSTE24O75844 475 aa7.6□□□□□ -1.19
CDKL5-201ENST00000379989 SCO1O75880 301 aa7.6□□□□□ -1.19
CDKL5-201ENST00000379989 SLITRK3O94933 977 aa7.6□□□□□ -1.19
CDKL5-201ENST00000379989 EGFRP00533 1210 aa7.6□□□□□ -1.19
CDKL5-201ENST00000379989 CFBP00751 764 aa7.6□□□□□ -1.19
CDKL5-201ENST00000379989 ATP5BP06576 529 aaKnown RBP7.6□□□□□ -1.19
CDKL5-201ENST00000379989 HOXC6P09630 235 aa7.6□□□□□ -1.19
CDKL5-201ENST00000379989 XRCC5P13010 732 aaKnown RBP7.6□□□□□ -1.19
CDKL5-201ENST00000379989 DSG3P32926 999 aa7.6□□□□□ -1.19
CDKL5-201ENST00000379989 QARSP47897 775 aaKnown RBP7.6□□□□□ -1.19
CDKL5-201ENST00000379989 PSMC5P62195 406 aa7.6□□□□□ -1.19
CDKL5-201ENST00000379989 POLR2GP62487 172 aaKnown RBP eCLIP7.6□□□□□ -1.19
CDKL5-201ENST00000379989 SELPLGQ14242 412 aa7.6□□□□□ -1.19
CDKL5-201ENST00000379989 TCEAL1Q15170 157 aa7.6□□□□□ -1.19
CDKL5-201ENST00000379989 TAF12Q16514 161 aa7.6□□□□□ -1.19
CDKL5-201ENST00000379989 PIWIL3Q7Z3Z3 882 aaKnown RBP7.6□□□□□ -1.19
CDKL5-201ENST00000379989 PAF1Q8N7H5 531 aa7.6□□□□□ -1.19
CDKL5-201ENST00000379989 ACER1Q8TDN7 264 aa7.6□□□□□ -1.19
CDKL5-201ENST00000379989 HTRA1Q92743 480 aa7.6□□□□□ -1.19
CDKL5-201ENST00000379989 REXO5Q96IC2 774 aaKnown RBP7.6□□□□□ -1.19
CDKL5-201ENST00000379989 RMDN3Q96TC7 470 aa7.6□□□□□ -1.19
CDKL5-201ENST00000379989 LPIN3Q9BQK8 851 aa7.6□□□□□ -1.19
CDKL5-201ENST00000379989 VRTNQ9H8Y1 702 aa7.6□□□□□ -1.19
CDKL5-201ENST00000379989 AGO4Q9HCK5 861 aaKnown RBP7.6□□□□□ -1.19
CDKL5-201ENST00000379989 CHST12Q9NRB3 414 aa7.6□□□□□ -1.19
CDKL5-201ENST00000379989 PLSCR3Q9NRY6 295 aa7.6□□□□□ -1.19
CDKL5-201ENST00000379989 DMAC2Q9NW81 257 aa7.6□□□□□ -1.19
CDKL5-201ENST00000379989 GGA3Q9NZ52 723 aa7.6□□□□□ -1.19
CDKL5-201ENST00000379989 PCDHAC2Q9Y5I4 1007 aa7.6□□□□□ -1.19
CDKL5-201ENST00000379989 CLRN2A0PK11 232 aa7.59□□□□□ -1.19
CDKL5-201ENST00000379989 RNGTTO60942 597 aaKnown RBP7.59□□□□□ -1.19
CDKL5-201ENST00000379989 ABCB7O75027 752 aa7.59□□□□□ -1.19
CDKL5-201ENST00000379989 KRT8P05787 483 aa7.59□□□□□ -1.19
CDKL5-201ENST00000379989 GRIA1P42261 906 aa7.59□□□□□ -1.19
CDKL5-201ENST00000379989 CENPAP49450 140 aa7.59□□□□□ -1.19
CDKL5-201ENST00000379989 SLC13A2Q13183 592 aa7.59□□□□□ -1.19
CDKL5-201ENST00000379989 MESDQ14696 234 aa7.59□□□□□ -1.19
CDKL5-201ENST00000379989 HERC3Q15034 1050 aa7.59□□□□□ -1.19
CDKL5-201ENST00000379989 CCDC142Q17RM4 750 aa7.59□□□□□ -1.19
CDKL5-201ENST00000379989 KIAA0408Q6ZU52 694 aa7.59□□□□□ -1.19
CDKL5-201ENST00000379989 CCDC60Q8IWA6 550 aaPredicted RBP7.59□□□□□ -1.19
CDKL5-201ENST00000379989 TCAIMQ8N3R3 496 aa7.59□□□□□ -1.19
CDKL5-201ENST00000379989 MCPH1Q8NEM0 835 aa7.59□□□□□ -1.19
CDKL5-201ENST00000379989 LHFPL5Q8TAF8 219 aa7.59□□□□□ -1.19
CDKL5-201ENST00000379989 NSUN6Q8TEA1 469 aaKnown RBP7.59□□□□□ -1.19
CDKL5-201ENST00000379989 ZFP90Q8TF47 636 aa7.59□□□□□ -1.19
CDKL5-201ENST00000379989 ALKBH8Q96BT7 664 aaKnown RBP7.59□□□□□ -1.19
CDKL5-201ENST00000379989 CCDC120Q96HB5 630 aa7.59□□□□□ -1.19
CDKL5-201ENST00000379989 CSF3RQ99062 836 aa7.59□□□□□ -1.19
CDKL5-201ENST00000379989 MECRQ9BV79 373 aa7.59□□□□□ -1.19
CDKL5-201ENST00000379989 TMEM39BQ9GZU3 492 aa7.59□□□□□ -1.19
CDKL5-201ENST00000379989 LIN7BQ9HAP6 207 aa7.59□□□□□ -1.19
CDKL5-201ENST00000379989 MAT2BQ9NZL9 334 aa7.59□□□□□ -1.19
CDKL5-201ENST00000379989 CHORDC1Q9UHD1 332 aaPredicted RBP7.59□□□□□ -1.19
CDKL5-201ENST00000379989 CAB39Q9Y376 341 aaPredicted RBP7.59□□□□□ -1.19
CDKL5-201ENST00000379989 ZNFX1Q9P2E3 1918 aaKnown RBP7.59□□□□□ -1.19
CDKL5-201ENST00000379989 FAM189A1O60320 539 aa7.59□□□□□ -1.19
CDKL5-201ENST00000379989 MAN1A2O60476 641 aa7.59□□□□□ -1.19
CDKL5-201ENST00000379989 CCNKO75909 580 aa7.59□□□□□ -1.19
CDKL5-201ENST00000379989 MAP3K6O95382 1288 aa7.59□□□□□ -1.19
CDKL5-201ENST00000379989 UGT2B4P06133 528 aa7.59□□□□□ -1.19
CDKL5-201ENST00000379989 KRT20P35900 424 aa7.59□□□□□ -1.19
CDKL5-201ENST00000379989 CLK1P49759 484 aaKnown RBP7.59□□□□□ -1.19
CDKL5-201ENST00000379989 TMBIM6P55061 237 aa7.59□□□□□ -1.19
CDKL5-201ENST00000379989 MRPS15P82914 257 aaKnown RBP7.59□□□□□ -1.19
CDKL5-201ENST00000379989 VAC14Q08AM6 782 aa7.59□□□□□ -1.19
CDKL5-201ENST00000379989 TRPC3Q13507 836 aa7.59□□□□□ -1.19
CDKL5-201ENST00000379989 FLOT2Q14254 428 aa7.59□□□□□ -1.19
CDKL5-201ENST00000379989 PPP1R3AQ16821 1122 aa7.59□□□□□ -1.19
CDKL5-201ENST00000379989 FAM171BQ6P995 826 aa7.59□□□□□ -1.19
CDKL5-201ENST00000379989 TTC33Q6PID6 262 aaPredicted RBP7.59□□□□□ -1.19
CDKL5-201ENST00000379989 ATG14Q6ZNE5 492 aa7.59□□□□□ -1.19
CDKL5-201ENST00000379989 CLEC10AQ8IUN9 316 aa7.59□□□□□ -1.19
CDKL5-201ENST00000379989 MICALL2Q8IY33 904 aa7.59□□□□□ -1.19
CDKL5-201ENST00000379989 MFSD4AQ8N468 514 aa7.59□□□□□ -1.19
CDKL5-201ENST00000379989 OR2T3Q8NH03 318 aa7.59□□□□□ -1.19
CDKL5-201ENST00000379989 BTBD6Q96KE9 485 aa7.59□□□□□ -1.19
CDKL5-201ENST00000379989 ACCSQ96QU6 501 aa7.59□□□□□ -1.19
CDKL5-201ENST00000379989 REEP2Q9BRK0 252 aa7.59□□□□□ -1.19
CDKL5-201ENST00000379989 NTPCRQ9BSD7 190 aaKnown RBP7.59□□□□□ -1.19
CDKL5-201ENST00000379989 HERPUD2Q9BSE4 406 aa7.59□□□□□ -1.19
CDKL5-201ENST00000379989 CHID1Q9BWS9 393 aa7.59□□□□□ -1.19
CDKL5-201ENST00000379989 TEX13BQ9BXU2 312 aa7.59□□□□□ -1.19
CDKL5-201ENST00000379989 FGFBP2Q9BYJ0 223 aa7.59□□□□□ -1.19
CDKL5-201ENST00000379989 C20orf27Q9GZN8 174 aa7.59□□□□□ -1.19
CDKL5-201ENST00000379989 RAD21L1Q9H4I0 556 aa7.59□□□□□ -1.19
CDKL5-201ENST00000379989 WDR70Q9NW82 654 aa7.59□□□□□ -1.19
CDKL5-201ENST00000379989 COQ3Q9NZJ6 369 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms