RNA–Protein interactions for RNA: ENST00000374747.9

NPLOC4-202, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2 BASIC

Gene NPLOC4, Length 5,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-202ENST00000374747 ZNF605Q86T29 641 aa12.45□□□□□ -0.42
NPLOC4-202ENST00000374747 OR56A4Q8NGH8 313 aa12.45□□□□□ -0.42
NPLOC4-202ENST00000374747 DGCR6LQ9BY27 220 aa12.45□□□□□ -0.42
NPLOC4-202ENST00000374747 CDT1Q9H211 546 aa12.45□□□□□ -0.42
NPLOC4-202ENST00000374747 ECM29Q5VYK3 1845 aa12.45□□□□□ -0.42
NPLOC4-202ENST00000374747 URODP06132 367 aa12.45□□□□□ -0.42
NPLOC4-202ENST00000374747 MYBL2P10244 700 aa12.45□□□□□ -0.42
NPLOC4-202ENST00000374747 PTDSS1P48651 473 aaKnown RBP12.45□□□□□ -0.42
NPLOC4-202ENST00000374747 SLC20A2Q08357 652 aa12.45□□□□□ -0.42
NPLOC4-202ENST00000374747 MSLNQ13421 630 aaPredicted RBP12.45□□□□□ -0.42
NPLOC4-202ENST00000374747 TAF5Q15542 800 aa12.45□□□□□ -0.42
NPLOC4-202ENST00000374747 KLHL12Q53G59 568 aa12.45□□□□□ -0.42
NPLOC4-202ENST00000374747 TMC7Q7Z402 723 aa12.45□□□□□ -0.42
NPLOC4-202ENST00000374747 CDK20Q8IZL9 346 aa12.45□□□□□ -0.42
NPLOC4-202ENST00000374747 UXS1Q8NBZ7 420 aa12.45□□□□□ -0.42
NPLOC4-202ENST00000374747 GPR20Q99678 358 aa12.45□□□□□ -0.42
NPLOC4-202ENST00000374747 MRPL9Q9BYD2 267 aaKnown RBP12.45□□□□□ -0.42
NPLOC4-202ENST00000374747 RBM22Q9NW64 420 aaKnown RBP eCLIP12.45□□□□□ -0.424e-10■■■■■ 42.2
NPLOC4-202ENST00000374747 BTBD3Q9Y2F9 522 aa12.45□□□□□ -0.42
NPLOC4-202ENST00000374747 COMMD3-BMI1R4GMX3 469 aa12.45□□□□□ -0.42
NPLOC4-202ENST00000374747 ITGB4P16144 1822 aa12.45□□□□□ -0.42
NPLOC4-202ENST00000374747 A0A0G2JLL6 359 aaPredicted RBP12.45□□□□□ -0.42
NPLOC4-202ENST00000374747 EFCAB10A6NFE3 127 aa12.45□□□□□ -0.42
NPLOC4-202ENST00000374747 MICAL2O94851 1124 aa12.45□□□□□ -0.42
NPLOC4-202ENST00000374747 CDC25CP30307 473 aa12.45□□□□□ -0.42
NPLOC4-202ENST00000374747 RPA3P35244 121 aaPredicted RBP12.45□□□□□ -0.42
NPLOC4-202ENST00000374747 GRK3P35626 688 aa12.45□□□□□ -0.42
NPLOC4-202ENST00000374747 GSSP48637 474 aa12.45□□□□□ -0.42
NPLOC4-202ENST00000374747 TOP3AQ13472 1001 aaPredicted RBP12.45□□□□□ -0.42
NPLOC4-202ENST00000374747 ZNF284Q2VY69 593 aa12.45□□□□□ -0.42
NPLOC4-202ENST00000374747 MFSD7Q6UXD7 560 aa12.45□□□□□ -0.42
NPLOC4-202ENST00000374747 PRRT2Q7Z6L0 340 aaPredicted RBP12.45□□□□□ -0.42
NPLOC4-202ENST00000374747 TMEM86AQ8N2M4 240 aa12.45□□□□□ -0.42
NPLOC4-202ENST00000374747 LRMDAQ9H2I8 198 aa12.45□□□□□ -0.42
NPLOC4-202ENST00000374747 TRPC4Q9UBN4 977 aa12.45□□□□□ -0.42
NPLOC4-202ENST00000374747 DNPEPQ9ULA0 475 aa12.45□□□□□ -0.42
NPLOC4-202ENST00000374747 ACTL7BQ9Y614 415 aa12.45□□□□□ -0.42
NPLOC4-202ENST00000374747 SNCAIPQ9Y6H5 919 aa12.45□□□□□ -0.42
NPLOC4-202ENST00000374747 SF3B1O75533 1304 aaKnown RBP eCLIP12.45□□□□□ -0.423e-6■■■■■ 69.5
NPLOC4-202ENST00000374747 SYNCRIPO60506 623 aaKnown RBP12.45□□□□□ -0.42
NPLOC4-202ENST00000374747 PKNOX1P55347 436 aa12.45□□□□□ -0.42
NPLOC4-202ENST00000374747 MRPS6P82932 125 aaKnown RBP12.45□□□□□ -0.42
NPLOC4-202ENST00000374747 GRIK3Q13003 919 aa12.45□□□□□ -0.42
NPLOC4-202ENST00000374747 ARHGAP15Q53QZ3 475 aa12.45□□□□□ -0.42
NPLOC4-202ENST00000374747 MARK2Q7KZI7 788 aaKnown RBP12.45□□□□□ -0.42
NPLOC4-202ENST00000374747 UNC93AQ86WB7 457 aa12.45□□□□□ -0.42
NPLOC4-202ENST00000374747 TMEM132CQ8N3T6 1108 aa12.45□□□□□ -0.42
NPLOC4-202ENST00000374747 MSL3Q8N5Y2 521 aaKnown RBP12.45□□□□□ -0.42
NPLOC4-202ENST00000374747 CENPIQ92674 756 aaPredicted RBP12.45□□□□□ -0.42
NPLOC4-202ENST00000374747 ANAPC2Q9UJX6 822 aa12.45□□□□□ -0.42
NPLOC4-202ENST00000374747 CICQ96RK0 1608 aaPredicted RBP12.45□□□□□ -0.42
NPLOC4-202ENST00000374747 RAD51BO15315 384 aa12.45□□□□□ -0.42
NPLOC4-202ENST00000374747 PAICSP22234 425 aaKnown RBP12.45□□□□□ -0.42
NPLOC4-202ENST00000374747 PRKCQQ04759 706 aa12.45□□□□□ -0.42
NPLOC4-202ENST00000374747 RRP1BQ14684 758 aaKnown RBP12.45□□□□□ -0.42
NPLOC4-202ENST00000374747 NRF1Q16656 503 aa12.45□□□□□ -0.42
NPLOC4-202ENST00000374747 TRIM48Q8IWZ4 208 aa12.45□□□□□ -0.42
NPLOC4-202ENST00000374747 HASPINQ8TF76 798 aa12.45□□□□□ -0.42
NPLOC4-202ENST00000374747 SEMA4DQ92854 862 aa12.45□□□□□ -0.42
NPLOC4-202ENST00000374747 NUAK2Q9H093 628 aa12.45□□□□□ -0.42
NPLOC4-202ENST00000374747 MBD2Q9UBB5 411 aa12.45□□□□□ -0.42
NPLOC4-202ENST00000374747 ATP6V1HQ9UI12 483 aa12.45□□□□□ -0.42
NPLOC4-202ENST00000374747 LNPEPQ9UIQ6 1025 aa12.45□□□□□ -0.42
NPLOC4-202ENST00000374747 TRHDEQ9UKU6 1024 aa12.45□□□□□ -0.42
NPLOC4-202ENST00000374747 PCDHGC5Q9Y5F6 944 aa12.45□□□□□ -0.42
NPLOC4-202ENST00000374747 KATNA1O75449 491 aa12.44□□□□□ -0.42
NPLOC4-202ENST00000374747 CYP1A1P04798 512 aaPredicted RBP12.44□□□□□ -0.42
NPLOC4-202ENST00000374747 LRPAP1P30533 357 aa12.44□□□□□ -0.42
NPLOC4-202ENST00000374747 RPL14P50914 215 aaKnown RBP12.44□□□□□ -0.42
NPLOC4-202ENST00000374747 NEK3P51956 506 aa12.44□□□□□ -0.42
NPLOC4-202ENST00000374747 CDH8P55286 799 aa12.44□□□□□ -0.42
NPLOC4-202ENST00000374747 ROR2Q01974 943 aaKnown RBP12.44□□□□□ -0.42
NPLOC4-202ENST00000374747 ZCCHC8Q6NZY4 707 aaKnown RBP12.44□□□□□ -0.42
NPLOC4-202ENST00000374747 CDC73Q6P1J9 531 aa12.44□□□□□ -0.42
NPLOC4-202ENST00000374747 KIAA0319LQ8IZA0 1049 aa12.44□□□□□ -0.42
NPLOC4-202ENST00000374747 CACTIN-AS1Q8N1I8 211 aa12.44□□□□□ -0.42
NPLOC4-202ENST00000374747 TSPAN14Q8NG11 270 aa12.44□□□□□ -0.42
NPLOC4-202ENST00000374747 EPS8L1Q8TE68 723 aa12.44□□□□□ -0.42
NPLOC4-202ENST00000374747 TPD52L3Q96J77 140 aa12.44□□□□□ -0.42
NPLOC4-202ENST00000374747 SH3BP4Q9P0V3 963 aa12.44□□□□□ -0.42
NPLOC4-202ENST00000374747 AP3M1Q9Y2T2 418 aa12.44□□□□□ -0.42
NPLOC4-202ENST00000374747 H3BN98 237 aa12.44□□□□□ -0.42
NPLOC4-202ENST00000374747 NR1H2P55055 460 aa12.44□□□□□ -0.42
NPLOC4-202ENST00000374747 RHOAP61586 193 aa12.44□□□□□ -0.42
NPLOC4-202ENST00000374747 STX4Q12846 297 aa12.44□□□□□ -0.42
NPLOC4-202ENST00000374747 EIF2B5Q13144 721 aaKnown RBP12.44□□□□□ -0.42
NPLOC4-202ENST00000374747 GSTA3Q16772 222 aa12.44□□□□□ -0.42
NPLOC4-202ENST00000374747 SPRYD7Q5W111 196 aa12.44□□□□□ -0.42
NPLOC4-202ENST00000374747 ZNF470Q6ECI4 717 aa12.44□□□□□ -0.42
NPLOC4-202ENST00000374747 FBXW8Q8N3Y1 598 aa12.44□□□□□ -0.42
NPLOC4-202ENST00000374747 SYNDIG1Q9H7V2 258 aa12.44□□□□□ -0.42
NPLOC4-202ENST00000374747 KLHL1Q9NR64 748 aa12.44□□□□□ -0.42
NPLOC4-202ENST00000374747 TMEM51Q9NW97 253 aa12.44□□□□□ -0.42
NPLOC4-202ENST00000374747 SNED1Q8TER0 1413 aa12.44□□□□□ -0.42
NPLOC4-202ENST00000374747 TNFRSF21O75509 655 aa12.44□□□□□ -0.42
NPLOC4-202ENST00000374747 KLHL18O94889 574 aa12.44□□□□□ -0.42
NPLOC4-202ENST00000374747 TSPAN19P0C672 248 aa12.44□□□□□ -0.42
NPLOC4-202ENST00000374747 GUCA1AP43080 201 aaPredicted RBP12.44□□□□□ -0.42
NPLOC4-202ENST00000374747 CSNK2BP67870 215 aa12.44□□□□□ -0.42
NPLOC4-202ENST00000374747 ACAP1Q15027 740 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms