RNA–Protein interactions for RNA: ENST00000374429.6

CXCL12-203, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CXCL12, Length 3,532 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-203ENST00000374429 CDH9Q9ULB4 789 aa10.99□□□□□ -0.65
CXCL12-203ENST00000374429 APOBEC2Q9Y235 224 aaKnown RBP10.99□□□□□ -0.65
CXCL12-203ENST00000374429 PCDHA11Q9Y5I1 949 aa10.99□□□□□ -0.65
CXCL12-203ENST00000374429 SHROOM3Q8TF72 1996 aa10.99□□□□□ -0.65
CXCL12-203ENST00000374429 ZSCAN9O15535 394 aaPredicted RBP10.98□□□□□ -0.65
CXCL12-203ENST00000374429 GPR39O43194 453 aa10.98□□□□□ -0.65
CXCL12-203ENST00000374429 KRT36O76013 467 aa10.98□□□□□ -0.65
CXCL12-203ENST00000374429 USP1O94782 785 aa10.98□□□□□ -0.65
CXCL12-203ENST00000374429 C2P06681 752 aa10.98□□□□□ -0.65
CXCL12-203ENST00000374429 CPA3P15088 417 aa10.98□□□□□ -0.65
CXCL12-203ENST00000374429 PMLP29590 882 aa10.98□□□□□ -0.65
CXCL12-203ENST00000374429 TBX4P57082 545 aa10.98□□□□□ -0.65
CXCL12-203ENST00000374429 TWF1Q12792 350 aa10.98□□□□□ -0.65
CXCL12-203ENST00000374429 BNIP1Q12981 228 aa10.98□□□□□ -0.65
CXCL12-203ENST00000374429 TAF11Q15544 211 aa10.98□□□□□ -0.65
CXCL12-203ENST00000374429 POM121L1PQ3SYA9 428 aa10.98□□□□□ -0.65
CXCL12-203ENST00000374429 ANKRD20A4Q4UJ75 823 aa10.98□□□□□ -0.65
CXCL12-203ENST00000374429 ZNF789Q5FWF6 425 aa10.98□□□□□ -0.65
CXCL12-203ENST00000374429 LRRC73Q5JTD7 316 aa10.98□□□□□ -0.65
CXCL12-203ENST00000374429 VARS2Q5ST30 1063 aaKnown RBP10.98□□□□□ -0.65
CXCL12-203ENST00000374429 C1orf146Q5VVC0 180 aa10.98□□□□□ -0.65
CXCL12-203ENST00000374429 ATG16L1Q676U5 607 aa10.98□□□□□ -0.65
CXCL12-203ENST00000374429 CWF19L1Q69YN2 538 aaKnown RBP10.98□□□□□ -0.65
CXCL12-203ENST00000374429 ZDHHC17Q8IUH5 632 aa10.98□□□□□ -0.65
CXCL12-203ENST00000374429 OR7D4Q8NG98 312 aa10.98□□□□□ -0.65
CXCL12-203ENST00000374429 URGCPQ8TCY9 931 aa10.98□□□□□ -0.65
CXCL12-203ENST00000374429 SLC45A3Q96JT2 553 aa10.98□□□□□ -0.65
CXCL12-203ENST00000374429 RNF208Q9H0X6 261 aa10.98□□□□□ -0.65
CXCL12-203ENST00000374429 WDR6Q9NNW5 1121 aaKnown RBP10.98□□□□□ -0.65
CXCL12-203ENST00000374429 HMX2A2RU54 273 aa10.98□□□□□ -0.65
CXCL12-203ENST00000374429 CA12O43570 354 aa10.98□□□□□ -0.65
CXCL12-203ENST00000374429 AHCYL1O43865 530 aa10.98□□□□□ -0.65
CXCL12-203ENST00000374429 ALDH2P05091 517 aa10.98□□□□□ -0.65
CXCL12-203ENST00000374429 CD68P34810 354 aaPredicted RBP10.98□□□□□ -0.65
CXCL12-203ENST00000374429 GARSP41250 739 aaKnown RBP10.98□□□□□ -0.65
CXCL12-203ENST00000374429 RCN1Q15293 331 aa10.98□□□□□ -0.65
CXCL12-203ENST00000374429 PARP6Q2NL67 630 aa10.98□□□□□ -0.65
CXCL12-203ENST00000374429 TEX44Q53QW1 395 aa10.98□□□□□ -0.65
CXCL12-203ENST00000374429 RALGPS1Q5JS13 557 aa10.98□□□□□ -0.65
CXCL12-203ENST00000374429 RTN4RL1Q86UN2 441 aaPredicted RBP10.98□□□□□ -0.65
CXCL12-203ENST00000374429 MIPOL1Q8TD10 442 aa10.98□□□□□ -0.65
CXCL12-203ENST00000374429 SLC26A7Q8TE54 656 aa10.98□□□□□ -0.65
CXCL12-203ENST00000374429 TEKT4Q8WW24 435 aa10.98□□□□□ -0.65
CXCL12-203ENST00000374429 RTP3Q9BQQ7 232 aa10.98□□□□□ -0.65
CXCL12-203ENST00000374429 CNGB3Q9NQW8 809 aa10.98□□□□□ -0.65
CXCL12-203ENST00000374429 MARCH2Q9P0N8 246 aa10.98□□□□□ -0.65
CXCL12-203ENST00000374429 EFR3BQ9Y2G0 817 aa10.98□□□□□ -0.65
CXCL12-203ENST00000374429 ATP11BQ9Y2G3 1177 aa10.98□□□□□ -0.65
CXCL12-203ENST00000374429 TLL2Q9Y6L7 1015 aa10.98□□□□□ -0.65
CXCL12-203ENST00000374429 CNTRLQ7Z7A1 2325 aa10.98□□□□□ -0.65
CXCL12-203ENST00000374429 KIF13BQ9NQT8 1826 aa10.98□□□□□ -0.65
CXCL12-203ENST00000374429 A0A0U1RQF3 1178 aa10.98□□□□□ -0.65
CXCL12-203ENST00000374429 OPHN1O60890 802 aa10.98□□□□□ -0.65
CXCL12-203ENST00000374429 RASSF9O75901 435 aa10.98□□□□□ -0.65
CXCL12-203ENST00000374429 WARSP23381 471 aaKnown RBP10.98□□□□□ -0.65
CXCL12-203ENST00000374429 NR2C2P49116 596 aa10.98□□□□□ -0.65
CXCL12-203ENST00000374429 TPGS1Q6ZTW0 290 aa10.98□□□□□ -0.65
CXCL12-203ENST00000374429 SERINC5Q86VE9 423 aa10.98□□□□□ -0.65
CXCL12-203ENST00000374429 LGI2Q8N0V4 545 aa10.98□□□□□ -0.65
CXCL12-203ENST00000374429 SKA2Q8WVK7 121 aaPredicted RBP10.98□□□□□ -0.65
CXCL12-203ENST00000374429 HMCESQ96FZ2 354 aa10.98□□□□□ -0.65
CXCL12-203ENST00000374429 CAPNS2Q96L46 248 aa10.98□□□□□ -0.65
CXCL12-203ENST00000374429 LRRC40Q9H9A6 602 aa10.98□□□□□ -0.65
CXCL12-203ENST00000374429 PLAC1Q9HBJ0 212 aa10.98□□□□□ -0.65
CXCL12-203ENST00000374429 A0A0D9SEW6 157 aa10.97□□□□□ -0.65
CXCL12-203ENST00000374429 ADAM12O43184 909 aa10.97□□□□□ -0.65
CXCL12-203ENST00000374429 GCATO75600 419 aa10.97□□□□□ -0.65
CXCL12-203ENST00000374429 ATXN8OSP0DMR3 200 aa10.97□□□□□ -0.65
CXCL12-203ENST00000374429 ENO3P13929 434 aaPredicted RBP10.97□□□□□ -0.65
CXCL12-203ENST00000374429 MX2P20592 715 aa10.97□□□□□ -0.65
CXCL12-203ENST00000374429 GLDCP23378 1020 aa10.97□□□□□ -0.65
CXCL12-203ENST00000374429 MPSTP25325 297 aa10.97□□□□□ -0.65
CXCL12-203ENST00000374429 RBM12BQ8IXT5 1001 aaKnown RBP10.97□□□□□ -0.65
CXCL12-203ENST00000374429 C10orf82Q8WW14 230 aa10.97□□□□□ -0.65
CXCL12-203ENST00000374429 MYLIPQ8WY64 445 aa10.97□□□□□ -0.65
CXCL12-203ENST00000374429 TMA16Q96EY4 203 aaKnown RBP10.97□□□□□ -0.65
CXCL12-203ENST00000374429 IFT43Q96FT9 208 aa10.97□□□□□ -0.65
CXCL12-203ENST00000374429 VPS39Q96JC1 886 aa10.97□□□□□ -0.65
CXCL12-203ENST00000374429 CATSPER2Q96P56 530 aa10.97□□□□□ -0.65
CXCL12-203ENST00000374429 MLPHQ9BV36 600 aaPredicted RBP10.97□□□□□ -0.65
CXCL12-203ENST00000374429 PIF1Q9H611 641 aa10.97□□□□□ -0.65
CXCL12-203ENST00000374429 PROCP04070 461 aa10.97□□□□□ -0.65
CXCL12-203ENST00000374429 INHAP05111 366 aa10.97□□□□□ -0.65
CXCL12-203ENST00000374429 ZNF235Q14590 738 aa10.97□□□□□ -0.65
CXCL12-203ENST00000374429 RIPOR1Q6ZS17 1223 aa10.97□□□□□ -0.65
CXCL12-203ENST00000374429 TREML1Q86YW5 311 aa10.97□□□□□ -0.65
CXCL12-203ENST00000374429 RNF168Q8IYW5 571 aaPredicted RBP10.97□□□□□ -0.65
CXCL12-203ENST00000374429 ZNF781Q8N8C0 355 aa10.97□□□□□ -0.65
CXCL12-203ENST00000374429 FAM156AQ8NDB6 213 aa10.97□□□□□ -0.65
CXCL12-203ENST00000374429 FAM13CQ8NE31 585 aa10.97□□□□□ -0.65
CXCL12-203ENST00000374429 PYDC1Q8WXC3 89 aa10.97□□□□□ -0.65
CXCL12-203ENST00000374429 NXNL1Q96CM4 212 aa10.97□□□□□ -0.65
CXCL12-203ENST00000374429 DENND2DQ9H6A0 471 aaPredicted RBP10.97□□□□□ -0.65
CXCL12-203ENST00000374429 A0A1B0GVG6 124 aa10.97□□□□□ -0.65
CXCL12-203ENST00000374429 MOXD2PA6NHM9 499 aa10.97□□□□□ -0.65
CXCL12-203ENST00000374429 ERI2A8K979 691 aaKnown RBP10.97□□□□□ -0.65
CXCL12-203ENST00000374429 E9PAM4 449 aa10.97□□□□□ -0.65
CXCL12-203ENST00000374429 PRPF4O43172 522 aaKnown RBP eCLIP10.97□□□□□ -0.65
CXCL12-203ENST00000374429 HLA-DQB2P05538 268 aa10.97□□□□□ -0.65
CXCL12-203ENST00000374429 SPRP35270 261 aaPredicted RBP10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms