RNA–Protein interactions for RNA: ENST00000373264.4

CDK9-201, Transcript of cyclin dependent kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK9, Length 2,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-201ENST00000373264 TTC24A2A3L6 582 aaPredicted RBP24.2■■□□□ 1.46
CDK9-201ENST00000373264 AURKAO14965 403 aa24.2■■□□□ 1.46
CDK9-201ENST00000373264 ATP6V1C1P21283 382 aa24.2■■□□□ 1.46
CDK9-201ENST00000373264 BTBD8Q5XKL5 378 aa24.2■■□□□ 1.46
CDK9-201ENST00000373264 NAPEPLDQ6IQ20 393 aa24.2■■□□□ 1.46
CDK9-201ENST00000373264 ZNF280BQ86YH2 543 aa24.2■■□□□ 1.46
CDK9-201ENST00000373264 GPR152Q8TDT2 470 aa24.2■■□□□ 1.46
CDK9-201ENST00000373264 SOCS4Q8WXH5 440 aa24.2■■□□□ 1.46
CDK9-201ENST00000373264 TBL1YQ9BQ87 522 aa24.2■■□□□ 1.46
CDK9-201ENST00000373264 BRD8Q9H0E9 1235 aa24.2■■□□□ 1.46
CDK9-201ENST00000373264 PTPRDP23468 1912 aa24.2■■□□□ 1.46
CDK9-201ENST00000373264 A0A0U1RQF3 1178 aa24.2■■□□□ 1.46
CDK9-201ENST00000373264 NEMP1O14524 444 aa24.2■■□□□ 1.46
CDK9-201ENST00000373264 CAPN15O75808 1086 aa24.2■■□□□ 1.46
CDK9-201ENST00000373264 EPHB1P54762 984 aa24.2■■□□□ 1.46
CDK9-201ENST00000373264 USP10Q14694 798 aaKnown RBP24.2■■□□□ 1.46
CDK9-201ENST00000373264 EML3Q32P44 896 aa24.2■■□□□ 1.46
CDK9-201ENST00000373264 C1orf146Q5VVC0 180 aa24.2■■□□□ 1.46
CDK9-201ENST00000373264 VAT1Q99536 393 aa24.2■■□□□ 1.46
CDK9-201ENST00000373264 KIFC1Q9BW19 673 aa24.2■■□□□ 1.46
CDK9-201ENST00000373264 OSBPL2Q9H1P3 480 aa24.2■■□□□ 1.46
CDK9-201ENST00000373264 DNAJC28Q9NX36 388 aa24.2■■□□□ 1.46
CDK9-201ENST00000373264 PACSIN3Q9UKS6 424 aa24.2■■□□□ 1.46
CDK9-201ENST00000373264 A0A1W2PQH9 124 aa24.19■■□□□ 1.46
CDK9-201ENST00000373264 M0QZQ0 153 aa24.19■■□□□ 1.46
CDK9-201ENST00000373264 CYP11A1P05108 521 aa24.19■■□□□ 1.46
CDK9-201ENST00000373264 SLC35E2BP0CK96 405 aa24.19■■□□□ 1.46
CDK9-201ENST00000373264 VHLP40337 213 aa24.19■■□□□ 1.46
CDK9-201ENST00000373264 PRPSAP1Q14558 356 aa24.19■■□□□ 1.46
CDK9-201ENST00000373264 PCSK7Q16549 785 aa24.19■■□□□ 1.46
CDK9-201ENST00000373264 ACE2Q9BYF1 805 aaPredicted RBP24.19■■□□□ 1.46
CDK9-201ENST00000373264 CDH19Q9H159 772 aa24.19■■□□□ 1.46
CDK9-201ENST00000373264 STX18Q9P2W9 335 aaKnown RBP24.19■■□□□ 1.46
CDK9-201ENST00000373264 PPM1HQ9ULR3 514 aa24.19■■□□□ 1.46
CDK9-201ENST00000373264 TNFRSF10BO14763 440 aa24.19■■□□□ 1.46
CDK9-201ENST00000373264 MPOP05164 745 aa24.19■■□□□ 1.46
CDK9-201ENST00000373264 ALOX15P16050 662 aaPredicted RBP24.19■■□□□ 1.46
CDK9-201ENST00000373264 TUBP50607 506 aa24.19■■□□□ 1.46
CDK9-201ENST00000373264 KCNA10Q16322 511 aa24.19■■□□□ 1.46
CDK9-201ENST00000373264 FRMD7Q6ZUT3 714 aa24.19■■□□□ 1.46
CDK9-201ENST00000373264 UCMAQ8WVF2 138 aa24.19■■□□□ 1.46
CDK9-201ENST00000373264 CCDC124Q96CT7 223 aaKnown RBP24.19■■□□□ 1.46
CDK9-201ENST00000373264 GPR22Q99680 433 aa24.19■■□□□ 1.46
CDK9-201ENST00000373264 OMDQ99983 421 aa24.19■■□□□ 1.46
CDK9-201ENST00000373264 GLOD4Q9HC38 313 aa24.19■■□□□ 1.46
CDK9-201ENST00000373264 ABI2Q9NYB9 513 aaPredicted RBP24.19■■□□□ 1.46
CDK9-201ENST00000373264 TIMM44O43615 452 aa24.18■■□□□ 1.46
CDK9-201ENST00000373264 JUNP05412 331 aaKnown RBP24.18■■□□□ 1.46
CDK9-201ENST00000373264 TUSC3Q13454 348 aa24.18■■□□□ 1.46
CDK9-201ENST00000373264 DSC3Q14574 896 aa24.18■■□□□ 1.46
CDK9-201ENST00000373264 CNGA3Q16281 694 aa24.18■■□□□ 1.46
CDK9-201ENST00000373264 DDR2Q16832 855 aa24.18■■□□□ 1.46
CDK9-201ENST00000373264 SLC39A12Q504Y0 691 aa24.18■■□□□ 1.46
CDK9-201ENST00000373264 TFAP2DQ7Z6R9 452 aa24.18■■□□□ 1.46
CDK9-201ENST00000373264 CENPLQ8N0S6 344 aaPredicted RBP24.18■■□□□ 1.46
CDK9-201ENST00000373264 ARHGAP24Q8N264 748 aa24.18■■□□□ 1.46
CDK9-201ENST00000373264 TDRD5Q8NAT2 981 aaKnown RBP24.18■■□□□ 1.46
CDK9-201ENST00000373264 MICAL1Q8TDZ2 1067 aa24.18■■□□□ 1.46
CDK9-201ENST00000373264 TTC1Q99614 292 aa24.18■■□□□ 1.46
CDK9-201ENST00000373264 NMRK2Q9NPI5 230 aa24.18■■□□□ 1.46
CDK9-201ENST00000373264 HS3ST4Q9Y661 456 aa24.18■■□□□ 1.46
CDK9-201ENST00000373264 MANSC4A6NHS7 340 aaPredicted RBP24.18■■□□□ 1.46
CDK9-201ENST00000373264 TRIM13O60858 407 aa24.18■■□□□ 1.46
CDK9-201ENST00000373264 DLG1Q12959 904 aa24.18■■□□□ 1.46
CDK9-201ENST00000373264 PKN3Q6P5Z2 889 aa24.18■■□□□ 1.46
CDK9-201ENST00000373264 SPATA2LQ8IUW3 424 aaPredicted RBP24.18■■□□□ 1.46
CDK9-201ENST00000373264 RBM22Q9NW64 420 aaKnown RBP eCLIP24.18■■□□□ 1.462e-7■■■□□ 17.6
CDK9-201ENST00000373264 RUVBL2Q9Y230 463 aaKnown RBP24.18■■□□□ 1.46
CDK9-201ENST00000373264 COL4A4P53420 1690 aaPredicted RBP24.17■■□□□ 1.46
CDK9-201ENST00000373264 MAGEB16A2A368 324 aa24.17■■□□□ 1.46
CDK9-201ENST00000373264 CACNG3O60359 315 aa24.17■■□□□ 1.46
CDK9-201ENST00000373264 ZNF623O75123 536 aa24.17■■□□□ 1.46
CDK9-201ENST00000373264 CCNCP24863 283 aa24.17■■□□□ 1.46
CDK9-201ENST00000373264 CCND3P30281 292 aaPredicted RBP24.17■■□□□ 1.46
CDK9-201ENST00000373264 CSRP3P50461 194 aa24.17■■□□□ 1.46
CDK9-201ENST00000373264 PAPOLAP51003 745 aaKnown RBP24.17■■□□□ 1.46
CDK9-201ENST00000373264 ACTR3P61158 418 aa24.17■■□□□ 1.46
CDK9-201ENST00000373264 MANEALQ5VSG8 457 aa24.17■■□□□ 1.46
CDK9-201ENST00000373264 EPGNQ6UW88 154 aa24.17■■□□□ 1.46
CDK9-201ENST00000373264 NET1Q7Z628 596 aaPredicted RBP24.17■■□□□ 1.46
CDK9-201ENST00000373264 SCYL1Q96KG9 808 aa24.17■■□□□ 1.46
CDK9-201ENST00000373264 TSGA13Q96PP4 275 aa24.17■■□□□ 1.46
CDK9-201ENST00000373264 OXSMQ9NWU1 459 aa24.17■■□□□ 1.46
CDK9-201ENST00000373264 GRK4P32298 578 aa24.17■■□□□ 1.46
CDK9-201ENST00000373264 COPAP53621 1224 aa24.17■■□□□ 1.46
CDK9-201ENST00000373264 CSE1LP55060 971 aaKnown RBP24.17■■□□□ 1.46
CDK9-201ENST00000373264 MAXP61244 160 aa24.17■■□□□ 1.46
CDK9-201ENST00000373264 BLMHQ13867 455 aa24.17■■□□□ 1.46
CDK9-201ENST00000373264 ANO4Q32M45 955 aa24.17■■□□□ 1.46
CDK9-201ENST00000373264 DNAL1Q4LDG9 190 aa24.17■■□□□ 1.46
CDK9-201ENST00000373264 TTC9BQ8N6N2 239 aa24.17■■□□□ 1.46
CDK9-201ENST00000373264 SGF29Q96ES7 293 aa24.17■■□□□ 1.46
CDK9-201ENST00000373264 IL12RB2Q99665 862 aa24.17■■□□□ 1.46
CDK9-201ENST00000373264 SIKE1Q9BRV8 207 aa24.17■■□□□ 1.46
CDK9-201ENST00000373264 ADAMTS4O75173 837 aa24.16■■□□□ 1.46
CDK9-201ENST00000373264 DDHD2O94830 711 aa24.16■■□□□ 1.46
CDK9-201ENST00000373264 EPHA3P29320 983 aa24.16■■□□□ 1.46
CDK9-201ENST00000373264 CCR1P32246 355 aa24.16■■□□□ 1.46
CDK9-201ENST00000373264 GRIA4P48058 902 aa24.16■■□□□ 1.46
CDK9-201ENST00000373264 ARCN1P48444 511 aaKnown RBP24.16■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms