RNA–Protein interactions for RNA: ENST00000369550.9

DKC1-201, Transcript of dyskerin pseudouridine synthase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DKC1, Length 2,577 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DKC1-201ENST00000369550 ITGA7Q13683 1181 aa17.15■□□□□ 0.34
DKC1-201ENST00000369550 AARS2Q5JTZ9 985 aaKnown RBP17.15■□□□□ 0.34
DKC1-201ENST00000369550 CLEC14AQ86T13 490 aa17.15■□□□□ 0.34
DKC1-201ENST00000369550 NIM1KQ8IY84 436 aa17.15■□□□□ 0.34
DKC1-201ENST00000369550 CCNYL1Q8N7R7 359 aa17.15■□□□□ 0.34
DKC1-201ENST00000369550 ISL2Q96A47 359 aa17.15■□□□□ 0.34
DKC1-201ENST00000369550 TRPC7Q9HCX4 862 aa17.15■□□□□ 0.34
DKC1-201ENST00000369550 UTP6Q9NYH9 597 aaKnown RBP17.15■□□□□ 0.34
DKC1-201ENST00000369550 GGA3Q9NZ52 723 aa17.15■□□□□ 0.34
DKC1-201ENST00000369550 PTBP2Q9UKA9 531 aaKnown RBP17.15■□□□□ 0.34
DKC1-201ENST00000369550 TLK1Q9UKI8 766 aa17.15■□□□□ 0.34
DKC1-201ENST00000369550 SLC39A10Q9ULF5 831 aa17.15■□□□□ 0.34
DKC1-201ENST00000369550 FADS3Q9Y5Q0 445 aa17.15■□□□□ 0.34
DKC1-201ENST00000369550 PRORSD1PA6NEY8 169 aa17.15■□□□□ 0.34
DKC1-201ENST00000369550 ZNF839A8K0R7 811 aa17.15■□□□□ 0.34
DKC1-201ENST00000369550 J3QRK9 145 aa17.15■□□□□ 0.34
DKC1-201ENST00000369550 PAPSS1O43252 624 aaPredicted RBP17.15■□□□□ 0.34
DKC1-201ENST00000369550 NOL3O60936 208 aaKnown RBP17.15■□□□□ 0.34
DKC1-201ENST00000369550 ITGB3P05106 788 aa17.15■□□□□ 0.34
DKC1-201ENST00000369550 EPHX2P34913 555 aa17.15■□□□□ 0.34
DKC1-201ENST00000369550 EFNA5P52803 228 aa17.15■□□□□ 0.34
DKC1-201ENST00000369550 PRKCQQ04759 706 aa17.15■□□□□ 0.34
DKC1-201ENST00000369550 PMS2P3Q13401 168 aa17.15■□□□□ 0.34
DKC1-201ENST00000369550 OLIG2Q13516 323 aa17.15■□□□□ 0.34
DKC1-201ENST00000369550 TMEM26Q6ZUK4 368 aa17.15■□□□□ 0.34
DKC1-201ENST00000369550 FAM83AQ86UY5 434 aa17.15■□□□□ 0.34
DKC1-201ENST00000369550 SCUBE3Q8IX30 993 aa17.15■□□□□ 0.34
DKC1-201ENST00000369550 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.15■□□□□ 0.342e-6■■■□□ 15
DKC1-201ENST00000369550 FBXL8Q96CD0 374 aa17.15■□□□□ 0.34
DKC1-201ENST00000369550 NPLQ9BXD5 320 aaPredicted RBP17.15■□□□□ 0.34
DKC1-201ENST00000369550 UPF3AQ9H1J1 476 aaKnown RBP17.15■□□□□ 0.34
DKC1-201ENST00000369550 CCDC68Q9H2F9 335 aa17.15■□□□□ 0.34
DKC1-201ENST00000369550 SPAG4Q9NPE6 437 aa17.15■□□□□ 0.34
DKC1-201ENST00000369550 SMOXQ9NWM0 555 aa17.15■□□□□ 0.34
DKC1-201ENST00000369550 FIS1Q9Y3D6 152 aa17.15■□□□□ 0.34
DKC1-201ENST00000369550 TMEM233B4DJY2 109 aa17.14■□□□□ 0.33
DKC1-201ENST00000369550 CLASP2O75122 1294 aaKnown RBP17.14■□□□□ 0.33
DKC1-201ENST00000369550 PRKCBP05771 671 aa17.14■□□□□ 0.33
DKC1-201ENST00000369550 APOA4P06727 396 aa17.14■□□□□ 0.33
DKC1-201ENST00000369550 CXCL8P10145 99 aa17.14■□□□□ 0.33
DKC1-201ENST00000369550 CD247P20963 164 aa17.14■□□□□ 0.33
DKC1-201ENST00000369550 NSUN2Q08J23 767 aaKnown RBP eCLIP17.14■□□□□ 0.33
DKC1-201ENST00000369550 STX5Q13190 355 aa17.14■□□□□ 0.33
DKC1-201ENST00000369550 TREML2Q5T2D2 321 aa17.14■□□□□ 0.33
DKC1-201ENST00000369550 PPP4R4Q6NUP7 873 aa17.14■□□□□ 0.33
DKC1-201ENST00000369550 LAYNQ6UX15 382 aa17.14■□□□□ 0.33
DKC1-201ENST00000369550 ZYG11AQ6WRX3 759 aa17.14■□□□□ 0.33
DKC1-201ENST00000369550 SIX6OS1Q8N1H7 587 aa17.14■□□□□ 0.33
DKC1-201ENST00000369550 CBR4Q8N4T8 237 aa17.14■□□□□ 0.33
DKC1-201ENST00000369550 CCNYQ8ND76 341 aa17.14■□□□□ 0.33
DKC1-201ENST00000369550 ZNF420Q8TAQ5 688 aaPredicted RBP17.14■□□□□ 0.33
DKC1-201ENST00000369550 LPAR1Q92633 364 aa17.14■□□□□ 0.33
DKC1-201ENST00000369550 CSPG4P5Q96PW8 444 aa17.14■□□□□ 0.33
DKC1-201ENST00000369550 NEURL2Q9BR09 285 aa17.14■□□□□ 0.33
DKC1-201ENST00000369550 POLR1BQ9H9Y6 1135 aa17.14■□□□□ 0.33
DKC1-201ENST00000369550 FAM49BQ9NUQ9 324 aa17.14■□□□□ 0.33
DKC1-201ENST00000369550 SIX4Q9UIU6 781 aa17.14■□□□□ 0.33
DKC1-201ENST00000369550 AP4E1Q9UPM8 1137 aa17.14■□□□□ 0.33
DKC1-201ENST00000369550 BAIAP3O94812 1187 aa17.14■□□□□ 0.33
DKC1-201ENST00000369550 ATXN1P54253 815 aaKnown RBP17.14■□□□□ 0.33
DKC1-201ENST00000369550 NR1D2Q14995 579 aa17.14■□□□□ 0.33
DKC1-201ENST00000369550 SLC15A3Q8IY34 581 aa17.14■□□□□ 0.33
DKC1-201ENST00000369550 SGF29Q96ES7 293 aa17.14■□□□□ 0.33
DKC1-201ENST00000369550 TCF12Q99081 682 aa17.14■□□□□ 0.33
DKC1-201ENST00000369550 EIF2B3Q9NR50 452 aaKnown RBP17.14■□□□□ 0.33
DKC1-201ENST00000369550 GID8Q9NWU2 228 aa17.14■□□□□ 0.33
DKC1-201ENST00000369550 HESX1Q9UBX0 185 aa17.14■□□□□ 0.33
DKC1-201ENST00000369550 MAFBQ9Y5Q3 323 aaPredicted RBP17.14■□□□□ 0.33
DKC1-201ENST00000369550 WDR81Q562E7 1941 aa17.14■□□□□ 0.33
DKC1-201ENST00000369550 RNF103-CHMP3A0A140T963 221 aa17.13■□□□□ 0.33
DKC1-201ENST00000369550 RBM47A0AV96 593 aaKnown RBP17.13■□□□□ 0.33
DKC1-201ENST00000369550 DPYSL4O14531 572 aa17.13■□□□□ 0.33
DKC1-201ENST00000369550 B4GALT4O60513 344 aa17.13■□□□□ 0.33
DKC1-201ENST00000369550 USP12O75317 370 aa17.13■□□□□ 0.33
DKC1-201ENST00000369550 ESRRBO95718 433 aa17.13■□□□□ 0.33
DKC1-201ENST00000369550 GABRB3P28472 473 aa17.13■□□□□ 0.33
DKC1-201ENST00000369550 GJA8P48165 433 aa17.13■□□□□ 0.33
DKC1-201ENST00000369550 EIF2B2P49770 351 aaKnown RBP17.13■□□□□ 0.33
DKC1-201ENST00000369550 NME5P56597 212 aa17.13■□□□□ 0.33
DKC1-201ENST00000369550 SEPT6Q14141 434 aa17.13■□□□□ 0.33
DKC1-201ENST00000369550 RAB39AQ14964 217 aa17.13■□□□□ 0.33
DKC1-201ENST00000369550 DPYSL2Q16555 572 aa17.13■□□□□ 0.33
DKC1-201ENST00000369550 RGS21Q2M5E4 152 aa17.13■□□□□ 0.33
DKC1-201ENST00000369550 MAP7D1Q3KQU3 841 aa17.13■□□□□ 0.33
DKC1-201ENST00000369550 MAP1SQ66K74 1059 aaPredicted RBP17.13■□□□□ 0.33
DKC1-201ENST00000369550 NCBP2-AS2Q69YL0 99 aa17.13■□□□□ 0.33
DKC1-201ENST00000369550 NIPAL1Q6NVV3 410 aa17.13■□□□□ 0.33
DKC1-201ENST00000369550 C1orf127Q8N9H9 656 aa17.13■□□□□ 0.33
DKC1-201ENST00000369550 DNAAF3Q8N9W5 541 aa17.13■□□□□ 0.33
DKC1-201ENST00000369550 RNF149Q8NC42 400 aa17.13■□□□□ 0.33
DKC1-201ENST00000369550 OR52K1Q8NGK4 314 aa17.13■□□□□ 0.33
DKC1-201ENST00000369550 CYGBQ8WWM9 190 aa17.13■□□□□ 0.33
DKC1-201ENST00000369550 ADI1Q9BV57 179 aa17.13■□□□□ 0.33
DKC1-201ENST00000369550 IL22Q9GZX6 179 aa17.13■□□□□ 0.33
DKC1-201ENST00000369550 BRD8Q9H0E9 1235 aa17.13■□□□□ 0.33
DKC1-201ENST00000369550 LRRC40Q9H9A6 602 aa17.13■□□□□ 0.33
DKC1-201ENST00000369550 GBA2Q9HCG7 927 aaPredicted RBP17.13■□□□□ 0.33
DKC1-201ENST00000369550 CCDC167Q9P0B6 97 aa17.13■□□□□ 0.33
DKC1-201ENST00000369550 AURKCQ9UQB9 309 aa17.13■□□□□ 0.33
DKC1-201ENST00000369550 TCRBV3S1A0A5B6 114 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms