RNA–Protein interactions for RNA: ENST00000368838.1

SNX27-201, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best) BASIC

Gene SNX27, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-201ENST00000368838 CXorf51AA0A1B0GTR3 108 aa9.01□□□□□ -0.97
SNX27-201ENST00000368838 ZNF840PA6NDX5 716 aa9.01□□□□□ -0.97
SNX27-201ENST00000368838 C5orf60A6NFR6 353 aa9.01□□□□□ -0.97
SNX27-201ENST00000368838 I6L893 689 aaPredicted RBP9.01□□□□□ -0.97
SNX27-201ENST00000368838 EIF3HO15372 352 aaKnown RBP eCLIP9.01□□□□□ -0.97
SNX27-201ENST00000368838 PPFIA2O75334 1257 aa9.01□□□□□ -0.97
SNX27-201ENST00000368838 GCATO75600 419 aa9.01□□□□□ -0.97
SNX27-201ENST00000368838 RPP40O75818 363 aaKnown RBP9.01□□□□□ -0.97
SNX27-201ENST00000368838 RBP3P10745 1247 aa9.01□□□□□ -0.97
SNX27-201ENST00000368838 JUNDP17535 347 aa9.01□□□□□ -0.97
SNX27-201ENST00000368838 MX2P20592 715 aa9.01□□□□□ -0.97
SNX27-201ENST00000368838 DDX6P26196 483 aaKnown RBP eCLIP9.01□□□□□ -0.97
SNX27-201ENST00000368838 WEE1P30291 646 aa9.01□□□□□ -0.97
SNX27-201ENST00000368838 SERPINB6P35237 376 aa9.01□□□□□ -0.97
SNX27-201ENST00000368838 IFNAR2P48551 515 aa9.01□□□□□ -0.97
SNX27-201ENST00000368838 SERPINB4P48594 390 aa9.01□□□□□ -0.97
SNX27-201ENST00000368838 SEC13P55735 322 aa9.01□□□□□ -0.97
SNX27-201ENST00000368838 PITX1P78337 314 aaPredicted RBP9.01□□□□□ -0.97
SNX27-201ENST00000368838 CDK16Q00536 496 aa9.01□□□□□ -0.97
SNX27-201ENST00000368838 SLC7A5Q01650 507 aa9.01□□□□□ -0.97
SNX27-201ENST00000368838 TAF10Q12962 218 aa9.01□□□□□ -0.97
SNX27-201ENST00000368838 CALCOCO2Q13137 446 aa9.01□□□□□ -0.97
SNX27-201ENST00000368838 CASP8Q14790 479 aa9.01□□□□□ -0.97
SNX27-201ENST00000368838 MORF4L2Q15014 288 aa9.01□□□□□ -0.97
SNX27-201ENST00000368838 PDK1Q15118 436 aa9.01□□□□□ -0.97
SNX27-201ENST00000368838 CA9Q16790 459 aa9.01□□□□□ -0.97
SNX27-201ENST00000368838 ZC3H12AQ5D1E8 599 aaKnown RBP9.01□□□□□ -0.97
SNX27-201ENST00000368838 PPM1JQ5JR12 505 aa9.01□□□□□ -0.97
SNX27-201ENST00000368838 NUGGCQ68CJ6 796 aa9.01□□□□□ -0.97
SNX27-201ENST00000368838 NCBP2-AS2Q69YL0 99 aa9.01□□□□□ -0.97
SNX27-201ENST00000368838 ZDHHC24Q6UX98 284 aa9.01□□□□□ -0.97
SNX27-201ENST00000368838 DNAJC14Q6Y2X3 702 aaPredicted RBP9.01□□□□□ -0.97
SNX27-201ENST00000368838 RFX8Q6ZV50 586 aa9.01□□□□□ -0.97
SNX27-201ENST00000368838 CROCCP2Q86T23 111 aa9.01□□□□□ -0.97
SNX27-201ENST00000368838 WDR5BQ86VZ2 330 aa9.01□□□□□ -0.97
SNX27-201ENST00000368838 RFX6Q8HWS3 928 aa9.01□□□□□ -0.97
SNX27-201ENST00000368838 CDKL3Q8IVW4 592 aaPredicted RBP9.01□□□□□ -0.97
SNX27-201ENST00000368838 UNC45BQ8IWX7 931 aa9.01□□□□□ -0.97
SNX27-201ENST00000368838 IQCKQ8N0W5 287 aa9.01□□□□□ -0.97
SNX27-201ENST00000368838 RPLP0P6Q8NHW5 317 aa9.01□□□□□ -0.97
SNX27-201ENST00000368838 C1orf54Q8WWF1 131 aa9.01□□□□□ -0.97
SNX27-201ENST00000368838 HSPH1Q92598 858 aa9.01□□□□□ -0.97
SNX27-201ENST00000368838 FBXO32Q969P5 355 aa9.01□□□□□ -0.97
SNX27-201ENST00000368838 BTN2A3PQ96KV6 586 aa9.01□□□□□ -0.97
SNX27-201ENST00000368838 VAT1Q99536 393 aa9.01□□□□□ -0.97
SNX27-201ENST00000368838 P2RY13Q9BPV8 354 aa9.01□□□□□ -0.97
SNX27-201ENST00000368838 FERMT1Q9BQL6 677 aa9.01□□□□□ -0.97
SNX27-201ENST00000368838 RTKNQ9BST9 563 aa9.01□□□□□ -0.97
SNX27-201ENST00000368838 LINC00597Q9H2U6 94 aa9.01□□□□□ -0.97
SNX27-201ENST00000368838 ACBD3Q9H3P7 528 aa9.01□□□□□ -0.97
SNX27-201ENST00000368838 DHX35Q9H5Z1 703 aaKnown RBP9.01□□□□□ -0.97
SNX27-201ENST00000368838 ECT2Q9H8V3 914 aa9.01□□□□□ -0.97
SNX27-201ENST00000368838 FAM204AQ9H8W3 233 aa9.01□□□□□ -0.97
SNX27-201ENST00000368838 ZDHHC4Q9NPG8 344 aa9.01□□□□□ -0.97
SNX27-201ENST00000368838 ZNF446Q9NWS9 450 aa9.01□□□□□ -0.97
SNX27-201ENST00000368838 MTRF1LQ9UGC7 380 aaKnown RBP9.01□□□□□ -0.97
SNX27-201ENST00000368838 SLC12A6Q9UHW9 1150 aa9.01□□□□□ -0.97
SNX27-201ENST00000368838 ZNF148Q9UQR1 794 aa9.01□□□□□ -0.97
SNX27-201ENST00000368838 A0A1W2PQH9 124 aa9□□□□□ -0.97
SNX27-201ENST00000368838 DRGXA6NNA5 263 aa9□□□□□ -0.97
SNX27-201ENST00000368838 DNALI1O14645 258 aaPredicted RBP9□□□□□ -0.97
SNX27-201ENST00000368838 TRDMT1O14717 391 aaKnown RBP9□□□□□ -0.97
SNX27-201ENST00000368838 DAPK3O43293 454 aa9□□□□□ -0.97
SNX27-201ENST00000368838 KRT37O76014 449 aa9□□□□□ -0.97
SNX27-201ENST00000368838 PAPSS2O95340 614 aaPredicted RBP9□□□□□ -0.97
SNX27-201ENST00000368838 KRT14P02533 472 aa9□□□□□ -0.97
SNX27-201ENST00000368838 NUDT17P0C025 328 aa9□□□□□ -0.97
SNX27-201ENST00000368838 MYBL2P10244 700 aa9□□□□□ -0.97
SNX27-201ENST00000368838 RARGP13631 454 aa9□□□□□ -0.97
SNX27-201ENST00000368838 HDCP19113 662 aa9□□□□□ -0.97
SNX27-201ENST00000368838 RPL21P46778 160 aaKnown RBP9□□□□□ -0.97
SNX27-201ENST00000368838 COG7P83436 770 aa9□□□□□ -0.97
SNX27-201ENST00000368838 PRKD1Q15139 912 aaPredicted RBP9□□□□□ -0.97
SNX27-201ENST00000368838 PPP1R7Q15435 360 aa9□□□□□ -0.97
SNX27-201ENST00000368838 ZNF77Q15935 545 aa9□□□□□ -0.97
SNX27-201ENST00000368838 CSRP2Q16527 193 aa9□□□□□ -0.97
SNX27-201ENST00000368838 PTPRNQ16849 979 aa9□□□□□ -0.97
SNX27-201ENST00000368838 EML3Q32P44 896 aa9□□□□□ -0.97
SNX27-201ENST00000368838 AASDHQ4L235 1098 aaPredicted RBP9□□□□□ -0.97
SNX27-201ENST00000368838 RAB6CQ53S08 254 aa9□□□□□ -0.97
SNX27-201ENST00000368838 SLC45A4Q5BKX6 768 aa9□□□□□ -0.97
SNX27-201ENST00000368838 ZFYVE27Q5T4F4 411 aa9□□□□□ -0.97
SNX27-201ENST00000368838 AFMIDQ63HM1 303 aa9□□□□□ -0.97
SNX27-201ENST00000368838 TCEAL6Q6IPX3 200 aa9□□□□□ -0.97
SNX27-201ENST00000368838 HIBCHQ6NVY1 386 aaPredicted RBP9□□□□□ -0.97
SNX27-201ENST00000368838 SFTPA1Q8IWL2 248 aa9□□□□□ -0.97
SNX27-201ENST00000368838 ZNF683Q8IZ20 524 aa9□□□□□ -0.97
SNX27-201ENST00000368838 SYNPOQ8N3V7 929 aa9□□□□□ -0.97
SNX27-201ENST00000368838 CPA6Q8N4T0 437 aa9□□□□□ -0.97
SNX27-201ENST00000368838 ATP6V0D2Q8N8Y2 350 aa9□□□□□ -0.97
SNX27-201ENST00000368838 NETO1Q8TDF5 533 aa9□□□□□ -0.97
SNX27-201ENST00000368838 SH3RF2Q8TEC5 729 aa9□□□□□ -0.97
SNX27-201ENST00000368838 GAB3Q8WWW8 586 aa9□□□□□ -0.97
SNX27-201ENST00000368838 NDRG1Q92597 394 aaKnown RBP9□□□□□ -0.97
SNX27-201ENST00000368838 TCEAL3Q969E4 200 aa9□□□□□ -0.97
SNX27-201ENST00000368838 PLD4Q96BZ4 506 aa9□□□□□ -0.97
SNX27-201ENST00000368838 HDAC11Q96DB2 347 aa9□□□□□ -0.97
SNX27-201ENST00000368838 FCRL2Q96LA5 508 aaPredicted RBP9□□□□□ -0.97
SNX27-201ENST00000368838 QKIQ96PU8 341 aaKnown RBP eCLIP9□□□□□ -0.97
SNX27-201ENST00000368838 FMO2Q99518 471 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms