RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 CCDC195A0A1B0GUA6 201 aa10.85□□□□□ -0.67
TPM3-212ENST00000368533 TRIM49D1C9J1S8 452 aa10.85□□□□□ -0.67
TPM3-212ENST00000368533 CNTN5O94779 1100 aa10.85□□□□□ -0.67
TPM3-212ENST00000368533 BGNP21810 368 aa10.85□□□□□ -0.67
TPM3-212ENST00000368533 PSMB4P28070 264 aa10.85□□□□□ -0.67
TPM3-212ENST00000368533 SCNN1AP37088 669 aa10.85□□□□□ -0.67
TPM3-212ENST00000368533 CXCR3P49682 368 aa10.85□□□□□ -0.67
TPM3-212ENST00000368533 SESN2P58004 480 aaPredicted RBP10.85□□□□□ -0.67
TPM3-212ENST00000368533 IRX4P78413 519 aa10.85□□□□□ -0.67
TPM3-212ENST00000368533 SLC45A4Q5BKX6 768 aa10.85□□□□□ -0.67
TPM3-212ENST00000368533 ACSBG2Q5FVE4 666 aa10.85□□□□□ -0.67
TPM3-212ENST00000368533 CASC4Q6P4E1 433 aa10.85□□□□□ -0.67
TPM3-212ENST00000368533 AGGF1Q8N302 714 aaeCLIP10.85□□□□□ -0.671e-7■□□□□ 11.2
TPM3-212ENST00000368533 MPP5Q8N3R9 675 aa10.85□□□□□ -0.67
TPM3-212ENST00000368533 HTR3CQ8WXA8 447 aa10.85□□□□□ -0.67
TPM3-212ENST00000368533 ZNF558Q96NG5 402 aa10.85□□□□□ -0.67
TPM3-212ENST00000368533 CERS4Q9HA82 394 aa10.85□□□□□ -0.67
TPM3-212ENST00000368533 TRPC7Q9HCX4 862 aa10.85□□□□□ -0.67
TPM3-212ENST00000368533 HEY2Q9UBP5 337 aa10.85□□□□□ -0.67
TPM3-212ENST00000368533 ZC3H7BQ9UGR2 993 aaKnown RBP10.85□□□□□ -0.67
TPM3-212ENST00000368533 C2orf71A6NGG8 1288 aa10.85□□□□□ -0.67
TPM3-212ENST00000368533 COPEO14579 308 aa10.85□□□□□ -0.67
TPM3-212ENST00000368533 TLR5O60602 858 aa10.85□□□□□ -0.67
TPM3-212ENST00000368533 ATP5HO75947 161 aa10.85□□□□□ -0.67
TPM3-212ENST00000368533 ARFIP2P53365 341 aa10.85□□□□□ -0.67
TPM3-212ENST00000368533 BMPR2Q13873 1038 aa10.85□□□□□ -0.67
TPM3-212ENST00000368533 DPYSQ14117 519 aa10.85□□□□□ -0.67
TPM3-212ENST00000368533 MFSD4BQ5TF39 518 aa10.85□□□□□ -0.67
TPM3-212ENST00000368533 UNC5BQ8IZJ1 945 aa10.85□□□□□ -0.67
TPM3-212ENST00000368533 DCAKDQ8WVC6 231 aa10.85□□□□□ -0.67
TPM3-212ENST00000368533 WDR60Q8WVS4 1066 aa10.85□□□□□ -0.67
TPM3-212ENST00000368533 GATA6Q92908 595 aa10.85□□□□□ -0.67
TPM3-212ENST00000368533 SERAC1Q96JX3 654 aa10.85□□□□□ -0.67
TPM3-212ENST00000368533 FRMD8P1Q9BZ68 369 aaPredicted RBP10.85□□□□□ -0.67
TPM3-212ENST00000368533 CLIC5Q9NZA1 410 aa10.85□□□□□ -0.67
TPM3-212ENST00000368533 KLHL8Q9P2G9 620 aaPredicted RBP10.85□□□□□ -0.67
TPM3-212ENST00000368533 STOML1Q9UBI4 398 aa10.85□□□□□ -0.67
TPM3-212ENST00000368533 HS3ST4Q9Y661 456 aa10.85□□□□□ -0.67
TPM3-212ENST00000368533 MAGEA13PA6NCF6 341 aa10.84□□□□□ -0.67
TPM3-212ENST00000368533 OR6C75A6NL08 312 aa10.84□□□□□ -0.67
TPM3-212ENST00000368533 GRXCR1A8MXD5 290 aa10.84□□□□□ -0.67
TPM3-212ENST00000368533 LYNP07948 512 aa10.84□□□□□ -0.67
TPM3-212ENST00000368533 CCR1P32246 355 aa10.84□□□□□ -0.67
TPM3-212ENST00000368533 TBX4P57082 545 aa10.84□□□□□ -0.67
TPM3-212ENST00000368533 PPP2R5DQ14738 602 aa10.84□□□□□ -0.67
TPM3-212ENST00000368533 LRRC36Q1X8D7 754 aa10.84□□□□□ -0.67
TPM3-212ENST00000368533 PIK3R6Q5UE93 754 aa10.84□□□□□ -0.67
TPM3-212ENST00000368533 LRRC74BQ6ZQY2 392 aa10.84□□□□□ -0.67
TPM3-212ENST00000368533 PRPF39Q86UA1 669 aaKnown RBP10.84□□□□□ -0.67
TPM3-212ENST00000368533 LCA5Q86VQ0 697 aa10.84□□□□□ -0.67
TPM3-212ENST00000368533 ENDOVQ8N8Q3 282 aaKnown RBP10.84□□□□□ -0.67
TPM3-212ENST00000368533 COLGALT1Q8NBJ5 622 aa10.84□□□□□ -0.67
TPM3-212ENST00000368533 C10orf82Q8WW14 230 aa10.84□□□□□ -0.67
TPM3-212ENST00000368533 ANKRD27Q96NW4 1050 aa10.84□□□□□ -0.67
TPM3-212ENST00000368533 DCLRE1BQ9H816 532 aa10.84□□□□□ -0.67
TPM3-212ENST00000368533 MARCH2Q9P0N8 246 aa10.84□□□□□ -0.67
TPM3-212ENST00000368533 SLC17A6Q9P2U8 582 aa10.84□□□□□ -0.67
TPM3-212ENST00000368533 C2orf78A6NCI8 922 aa10.84□□□□□ -0.67
TPM3-212ENST00000368533 SLC38A8A6NNN8 435 aa10.84□□□□□ -0.67
TPM3-212ENST00000368533 DCLK1O15075 740 aa10.84□□□□□ -0.67
TPM3-212ENST00000368533 HNRNPCP07910 306 aaKnown RBP eCLIP10.84□□□□□ -0.67
TPM3-212ENST00000368533 KITP10721 976 aa10.84□□□□□ -0.67
TPM3-212ENST00000368533 TMED1Q13445 227 aa10.84□□□□□ -0.67
TPM3-212ENST00000368533 CFAP157Q5JU67 520 aa10.84□□□□□ -0.67
TPM3-212ENST00000368533 ARCQ7LC44 396 aa10.84□□□□□ -0.67
TPM3-212ENST00000368533 BNIPLQ7Z465 357 aa10.84□□□□□ -0.67
TPM3-212ENST00000368533 MON1AQ86VX9 555 aa10.84□□□□□ -0.67
TPM3-212ENST00000368533 BANPQ8N9N5 519 aa10.84□□□□□ -0.67
TPM3-212ENST00000368533 ARMC5Q96C12 935 aa10.84□□□□□ -0.67
TPM3-212ENST00000368533 KLC2Q9H0B6 622 aa10.84□□□□□ -0.67
TPM3-212ENST00000368533 HSFX1Q9UBD0 423 aa10.84□□□□□ -0.67
TPM3-212ENST00000368533 PRKAG2Q9UGJ0 569 aa10.84□□□□□ -0.67
TPM3-212ENST00000368533 ACTL7AQ9Y615 435 aa10.84□□□□□ -0.67
TPM3-212ENST00000368533 TANC1Q9C0D5 1861 aa10.84□□□□□ -0.67
TPM3-212ENST00000368533 HAUS5O94927 633 aa10.84□□□□□ -0.67
TPM3-212ENST00000368533 JCHAINP01591 159 aa10.84□□□□□ -0.67
TPM3-212ENST00000368533 HAPLN1P10915 354 aaPredicted RBP10.84□□□□□ -0.67
TPM3-212ENST00000368533 CCDC15Q0P6D6 951 aa10.84□□□□□ -0.67
TPM3-212ENST00000368533 ZBTB17Q13105 803 aa10.84□□□□□ -0.67
TPM3-212ENST00000368533 PARP6Q2NL67 630 aa10.84□□□□□ -0.67
TPM3-212ENST00000368533 ALFQ53S48 1182 aa10.84□□□□□ -0.67
TPM3-212ENST00000368533 DUS1LQ6P1R4 473 aaKnown RBP10.84□□□□□ -0.67
TPM3-212ENST00000368533 OTOP3Q7RTS5 596 aa10.84□□□□□ -0.67
TPM3-212ENST00000368533 CDKL3Q8IVW4 592 aaPredicted RBP10.84□□□□□ -0.67
TPM3-212ENST00000368533 ZNF567Q8N184 647 aa10.84□□□□□ -0.67
TPM3-212ENST00000368533 TMEM199Q8N511 208 aa10.84□□□□□ -0.67
TPM3-212ENST00000368533 ALKBH8Q96BT7 664 aaKnown RBP10.84□□□□□ -0.67
TPM3-212ENST00000368533 DTNBP1Q96EV8 351 aa10.84□□□□□ -0.67
TPM3-212ENST00000368533 VCX3BQ9H321 246 aa10.84□□□□□ -0.67
TPM3-212ENST00000368533 ATXN3LQ9H3M9 355 aa10.84□□□□□ -0.67
TPM3-212ENST00000368533 VCX3AQ9NNX9 186 aa10.84□□□□□ -0.67
TPM3-212ENST00000368533 FBXO6Q9NRD1 293 aaPredicted RBP10.84□□□□□ -0.67
TPM3-212ENST00000368533 DDX18Q9NVP1 670 aaKnown RBP10.84□□□□□ -0.67
TPM3-212ENST00000368533 PAK5Q9P286 719 aa10.84□□□□□ -0.67
TPM3-212ENST00000368533 MARCOQ9UEW3 520 aaPredicted RBP10.84□□□□□ -0.67
TPM3-212ENST00000368533 TM9SF1O15321 606 aa10.83□□□□□ -0.68
TPM3-212ENST00000368533 TSPAN3O60637 253 aa10.83□□□□□ -0.68
TPM3-212ENST00000368533 KRT37O76014 449 aa10.83□□□□□ -0.68
TPM3-212ENST00000368533 TWF1Q12792 350 aa10.83□□□□□ -0.68
TPM3-212ENST00000368533 PPP1R14CQ8TAE6 165 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms