RNA–Protein interactions for RNA: ENST00000362378.1

RNU6-28P-201, Transcript of RNA, U6 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6-28P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-28P-201ENST00000362378 C11orf97A0A1B0GVM6 126 aaPredicted RBP4□□□□□ -1.77
RNU6-28P-201ENST00000362378 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4□□□□□ -1.77
RNU6-28P-201ENST00000362378 ARHGAP10A1A4S6 786 aa4□□□□□ -1.77
RNU6-28P-201ENST00000362378 TARSL2A2RTX5 802 aaKnown RBP4□□□□□ -1.77
RNU6-28P-201ENST00000362378 CXorf65A6NEN9 183 aa4□□□□□ -1.77
RNU6-28P-201ENST00000362378 GTPBP1O00178 669 aaKnown RBP4□□□□□ -1.77
RNU6-28P-201ENST00000362378 FZD7O75084 574 aa4□□□□□ -1.77
RNU6-28P-201ENST00000362378 PROP1O75360 226 aa4□□□□□ -1.77
RNU6-28P-201ENST00000362378 TACC1O75410 805 aa4□□□□□ -1.77
RNU6-28P-201ENST00000362378 C1QL1O75973 258 aa4□□□□□ -1.77
RNU6-28P-201ENST00000362378 RNF8O76064 485 aa4□□□□□ -1.77
RNU6-28P-201ENST00000362378 LCKP06239 509 aa4□□□□□ -1.77
RNU6-28P-201ENST00000362378 GALTP07902 379 aa4□□□□□ -1.77
RNU6-28P-201ENST00000362378 SPARCP09486 303 aa4□□□□□ -1.77
RNU6-28P-201ENST00000362378 TM4SF1P30408 202 aa4□□□□□ -1.77
RNU6-28P-201ENST00000362378 CHRNA5P30532 468 aa4□□□□□ -1.77
RNU6-28P-201ENST00000362378 FMO4P31512 558 aa4□□□□□ -1.77
RNU6-28P-201ENST00000362378 RAD52P43351 418 aa4□□□□□ -1.77
RNU6-28P-201ENST00000362378 CTCFP49711 727 aaPredicted RBP4□□□□□ -1.77
RNU6-28P-201ENST00000362378 CYP2J2P51589 502 aa4□□□□□ -1.77
RNU6-28P-201ENST00000362378 TUBA4AP68366 448 aa4□□□□□ -1.77
RNU6-28P-201ENST00000362378 HSF1Q00613 529 aa4□□□□□ -1.77
RNU6-28P-201ENST00000362378 TFF2Q03403 129 aa4□□□□□ -1.77
RNU6-28P-201ENST00000362378 CUL4AQ13619 759 aa4□□□□□ -1.77
RNU6-28P-201ENST00000362378 PGM5Q15124 567 aa4□□□□□ -1.77
RNU6-28P-201ENST00000362378 CCNG2Q16589 344 aa4□□□□□ -1.77
RNU6-28P-201ENST00000362378 PRAMEF17Q5VTA0 474 aa4□□□□□ -1.77
RNU6-28P-201ENST00000362378 FCRLBQ6BAA4 426 aa4□□□□□ -1.77
RNU6-28P-201ENST00000362378 CDC73Q6P1J9 531 aa4□□□□□ -1.77
RNU6-28P-201ENST00000362378 KLHL24Q6TFL4 600 aa4□□□□□ -1.77
RNU6-28P-201ENST00000362378 PCSK4Q6UW60 755 aa4□□□□□ -1.77
RNU6-28P-201ENST00000362378 UBE2Q1Q7Z7E8 422 aa4□□□□□ -1.77
RNU6-28P-201ENST00000362378 MRGPRGQ86SM5 289 aa4□□□□□ -1.77
RNU6-28P-201ENST00000362378 TADA2BQ86TJ2 420 aa4□□□□□ -1.77
RNU6-28P-201ENST00000362378 CNTROBQ8N137 903 aa4□□□□□ -1.77
RNU6-28P-201ENST00000362378 DNAAF1Q8NEP3 725 aa4□□□□□ -1.77
RNU6-28P-201ENST00000362378 GADD45GIP1Q8TAE8 222 aaPredicted RBP4□□□□□ -1.77
RNU6-28P-201ENST00000362378 TMEM170AQ8WVE7 144 aa4□□□□□ -1.77
RNU6-28P-201ENST00000362378 ERP27Q96DN0 273 aa4□□□□□ -1.77
RNU6-28P-201ENST00000362378 KLHL15Q96M94 604 aa4□□□□□ -1.77
RNU6-28P-201ENST00000362378 NUDT16L1Q9BRJ7 211 aaKnown RBP4□□□□□ -1.77
RNU6-28P-201ENST00000362378 IFT27Q9BW83 186 aa4□□□□□ -1.77
RNU6-28P-201ENST00000362378 SYNCQ9H7C4 482 aa4□□□□□ -1.77
RNU6-28P-201ENST00000362378 EIF2B3Q9NR50 452 aaKnown RBP4□□□□□ -1.77
RNU6-28P-201ENST00000362378 SMYD2Q9NRG4 433 aa4□□□□□ -1.77
RNU6-28P-201ENST00000362378 C20orf141Q9NUB4 165 aa4□□□□□ -1.77
RNU6-28P-201ENST00000362378 SEPT11Q9NVA2 429 aaKnown RBP4□□□□□ -1.77
RNU6-28P-201ENST00000362378 HAUS2Q9NVX0 235 aa4□□□□□ -1.77
RNU6-28P-201ENST00000362378 HCFC1R1Q9NWW0 138 aa4□□□□□ -1.77
RNU6-28P-201ENST00000362378 KIAA1456Q9P272 454 aa4□□□□□ -1.77
RNU6-28P-201ENST00000362378 SLCO3A1Q9UIG8 710 aa4□□□□□ -1.77
RNU6-28P-201ENST00000362378 HS3ST3A1Q9Y663 406 aa4□□□□□ -1.77
RNU6-28P-201ENST00000362378 SLC22A23A1A5C7 686 aa3.99□□□□□ -1.77
RNU6-28P-201ENST00000362378 LIPT2A6NK58 231 aa3.99□□□□□ -1.77
RNU6-28P-201ENST00000362378 MSI1O43347 362 aaKnown RBP3.99□□□□□ -1.77
RNU6-28P-201ENST00000362378 RAMP2O60895 175 aa3.99□□□□□ -1.77
RNU6-28P-201ENST00000362378 TMCC2O75069 709 aa3.99□□□□□ -1.77
RNU6-28P-201ENST00000362378 NEURL1O76050 574 aa3.99□□□□□ -1.77
RNU6-28P-201ENST00000362378 CBX6O95503 412 aa3.99□□□□□ -1.77
RNU6-28P-201ENST00000362378 WNT1P04628 370 aa3.99□□□□□ -1.77
RNU6-28P-201ENST00000362378 HEXAP06865 529 aa3.99□□□□□ -1.77
RNU6-28P-201ENST00000362378 ZNF8P17098 575 aaPredicted RBP3.99□□□□□ -1.77
RNU6-28P-201ENST00000362378 CDH2P19022 906 aaPredicted RBP3.99□□□□□ -1.77
RNU6-28P-201ENST00000362378 SLC12A2P55011 1212 aa3.99□□□□□ -1.77
RNU6-28P-201ENST00000362378 YPEL5P62699 121 aa3.99□□□□□ -1.77
RNU6-28P-201ENST00000362378 TMEM115Q12893 351 aaPredicted RBP3.99□□□□□ -1.77
RNU6-28P-201ENST00000362378 ACVR2BQ13705 512 aa3.99□□□□□ -1.77
RNU6-28P-201ENST00000362378 GALNT3Q14435 633 aa3.99□□□□□ -1.77
RNU6-28P-201ENST00000362378 GSTA3Q16772 222 aa3.99□□□□□ -1.77
RNU6-28P-201ENST00000362378 ZXDCQ2QGD7 858 aaPredicted RBP3.99□□□□□ -1.77
RNU6-28P-201ENST00000362378 EARS2Q5JPH6 523 aaKnown RBP3.99□□□□□ -1.77
RNU6-28P-201ENST00000362378 SERTAD4-AS1Q5TG53 156 aa3.99□□□□□ -1.77
RNU6-28P-201ENST00000362378 TBC1D9BQ66K14 1250 aa3.99□□□□□ -1.77
RNU6-28P-201ENST00000362378 ATG9BQ674R7 924 aa3.99□□□□□ -1.77
RNU6-28P-201ENST00000362378 FAM160B2Q86V87 743 aa3.99□□□□□ -1.77
RNU6-28P-201ENST00000362378 C8orf58Q8NAV2 365 aa3.99□□□□□ -1.77
RNU6-28P-201ENST00000362378 FAM98AQ8NCA5 519 aaKnown RBP3.99□□□□□ -1.77
RNU6-28P-201ENST00000362378 NEK9Q8TD19 979 aa3.99□□□□□ -1.77
RNU6-28P-201ENST00000362378 FAR1Q8WVX9 515 aa3.99□□□□□ -1.77
RNU6-28P-201ENST00000362378 KAT2AQ92830 837 aa3.99□□□□□ -1.77
RNU6-28P-201ENST00000362378 MAP4K1Q92918 833 aa3.99□□□□□ -1.77
RNU6-28P-201ENST00000362378 CLMNQ96JQ2 1002 aa3.99□□□□□ -1.77
RNU6-28P-201ENST00000362378 MAP7D2Q96T17 732 aa3.99□□□□□ -1.77
RNU6-28P-201ENST00000362378 EFHD1Q9BUP0 239 aa3.99□□□□□ -1.77
RNU6-28P-201ENST00000362378 CXorf56Q9H5V9 222 aa3.99□□□□□ -1.77
RNU6-28P-201ENST00000362378 MOV10Q9HCE1 1003 aaKnown RBP3.99□□□□□ -1.77
RNU6-28P-201ENST00000362378 SNTG1Q9NSN8 517 aa3.99□□□□□ -1.77
RNU6-28P-201ENST00000362378 BABAM1Q9NWV8 329 aa3.99□□□□□ -1.77
RNU6-28P-201ENST00000362378 NCKIPSDQ9NZQ3 722 aa3.99□□□□□ -1.77
RNU6-28P-201ENST00000362378 LIMA1Q9UHB6 759 aaKnown RBP3.99□□□□□ -1.77
RNU6-28P-201ENST00000362378 IPO11Q9UI26 975 aaKnown RBP3.99□□□□□ -1.77
RNU6-28P-201ENST00000362378 CDH22Q9UJ99 828 aa3.99□□□□□ -1.77
RNU6-28P-201ENST00000362378 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.99□□□□□ -1.77
RNU6-28P-201ENST00000362378 INSL6Q9Y581 213 aa3.99□□□□□ -1.77
RNU6-28P-201ENST00000362378 KCNE2Q9Y6J6 123 aa3.99□□□□□ -1.77
RNU6-28P-201ENST00000362378 SETD1BQ9UPS6 1966 aaKnown RBP3.98□□□□□ -1.77
RNU6-28P-201ENST00000362378 CYP2D7A0A087X1C5 515 aa3.98□□□□□ -1.77
RNU6-28P-201ENST00000362378 A0A0A0MQY5 61 aa3.98□□□□□ -1.77
RNU6-28P-201ENST00000362378 AGAP14A8MT82 685 aa3.98□□□□□ -1.77
RNU6-28P-201ENST00000362378 AP3D1O14617 1153 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms