RNA–Protein interactions for RNA: ENST00000361909.8

CMTM3-201, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-201ENST00000361909 BOLA2-SMG1P6H3BVE0 249 aa19.35■□□□□ 0.69
CMTM3-201ENST00000361909 TSPAN1O60635 241 aa19.35■□□□□ 0.69
CMTM3-201ENST00000361909 SERPINB7O75635 380 aa19.35■□□□□ 0.69
CMTM3-201ENST00000361909 BAIAP3O94812 1187 aa19.35■□□□□ 0.69
CMTM3-201ENST00000361909 ERBB2P04626 1255 aa19.35■□□□□ 0.69
CMTM3-201ENST00000361909 PGAM1P18669 254 aa19.35■□□□□ 0.69
CMTM3-201ENST00000361909 SERPINB5P36952 375 aa19.35■□□□□ 0.69
CMTM3-201ENST00000361909 SEZ6Q53EL9 994 aa19.35■□□□□ 0.69
CMTM3-201ENST00000361909 ATG14Q6ZNE5 492 aa19.35■□□□□ 0.69
CMTM3-201ENST00000361909 ZNF781Q8N8C0 355 aa19.35■□□□□ 0.69
CMTM3-201ENST00000361909 TDRD5Q8NAT2 981 aaKnown RBP19.35■□□□□ 0.69
CMTM3-201ENST00000361909 PXYLP1Q8TE99 480 aa19.35■□□□□ 0.69
CMTM3-201ENST00000361909 CPXM1Q96SM3 734 aa19.35■□□□□ 0.69
CMTM3-201ENST00000361909 PPP1R16BQ96T49 567 aa19.35■□□□□ 0.69
CMTM3-201ENST00000361909 ADPGKQ9BRR6 497 aa19.35■□□□□ 0.69
CMTM3-201ENST00000361909 ZNF670Q9BS34 389 aa19.35■□□□□ 0.69
CMTM3-201ENST00000361909 FAM49AQ9H0Q0 323 aaPredicted RBP19.35■□□□□ 0.69
CMTM3-201ENST00000361909 UTP6Q9NYH9 597 aaKnown RBP19.35■□□□□ 0.69
CMTM3-201ENST00000361909 TMEM216Q9P0N5 145 aa19.35■□□□□ 0.69
CMTM3-201ENST00000361909 TXNDC16Q9P2K2 825 aa19.35■□□□□ 0.69
CMTM3-201ENST00000361909 VTI1BQ9UEU0 232 aa19.35■□□□□ 0.69
CMTM3-201ENST00000361909 TREHO43280 583 aa19.34■□□□□ 0.69
CMTM3-201ENST00000361909 ADAMTS4O75173 837 aa19.34■□□□□ 0.69
CMTM3-201ENST00000361909 ZNF189O75820 626 aaPredicted RBP19.34■□□□□ 0.69
CMTM3-201ENST00000361909 HMGCRP04035 888 aa19.34■□□□□ 0.69
CMTM3-201ENST00000361909 CST5P28325 142 aaPredicted RBP19.34■□□□□ 0.69
CMTM3-201ENST00000361909 MYL6P60660 151 aa19.34■□□□□ 0.69
CMTM3-201ENST00000361909 NAA20P61599 178 aa19.34■□□□□ 0.69
CMTM3-201ENST00000361909 TRIM32Q13049 653 aa19.34■□□□□ 0.69
CMTM3-201ENST00000361909 BTG3Q14201 252 aaPredicted RBP19.34■□□□□ 0.69
CMTM3-201ENST00000361909 ARHGEF6Q15052 776 aa19.34■□□□□ 0.69
CMTM3-201ENST00000361909 PDK1Q15118 436 aa19.34■□□□□ 0.69
CMTM3-201ENST00000361909 DUOXA2Q1HG44 320 aa19.34■□□□□ 0.69
CMTM3-201ENST00000361909 KIZQ2M2Z5 673 aa19.34■□□□□ 0.69
CMTM3-201ENST00000361909 ZNF394Q53GI3 561 aa19.34■□□□□ 0.69
CMTM3-201ENST00000361909 TAF2Q6P1X5 1199 aa19.34■□□□□ 0.69
CMTM3-201ENST00000361909 TTC30AQ86WT1 665 aa19.34■□□□□ 0.69
CMTM3-201ENST00000361909 MPP5Q8N3R9 675 aa19.34■□□□□ 0.69
CMTM3-201ENST00000361909 CD99L2Q8TCZ2 262 aa19.34■□□□□ 0.69
CMTM3-201ENST00000361909 ISOC1Q96CN7 298 aa19.34■□□□□ 0.69
CMTM3-201ENST00000361909 UHRF1Q96T88 793 aaPredicted RBP19.34■□□□□ 0.69
CMTM3-201ENST00000361909 HNRNPABQ99729 332 aaKnown RBP19.34■□□□□ 0.69
CMTM3-201ENST00000361909 ILKAPQ9H0C8 392 aaPredicted RBP19.34■□□□□ 0.69
CMTM3-201ENST00000361909 RPF1Q9H9Y2 349 aaKnown RBP19.34■□□□□ 0.69
CMTM3-201ENST00000361909 PRDM16Q9HAZ2 1276 aa19.34■□□□□ 0.69
CMTM3-201ENST00000361909 EIF2B3Q9NR50 452 aaKnown RBP19.34■□□□□ 0.69
CMTM3-201ENST00000361909 CYTH4Q9UIA0 394 aa19.34■□□□□ 0.69
CMTM3-201ENST00000361909 AP4S1Q9Y587 144 aa19.34■□□□□ 0.69
CMTM3-201ENST00000361909 HDAC3O15379 428 aa19.34■□□□□ 0.69
CMTM3-201ENST00000361909 APOA4P06727 396 aa19.34■□□□□ 0.69
CMTM3-201ENST00000361909 PRKAR2AP13861 404 aaKnown RBP19.34■□□□□ 0.69
CMTM3-201ENST00000361909 TYK2P29597 1187 aa19.34■□□□□ 0.69
CMTM3-201ENST00000361909 GP5P40197 560 aa19.34■□□□□ 0.69
CMTM3-201ENST00000361909 ASPAP45381 313 aa19.34■□□□□ 0.69
CMTM3-201ENST00000361909 TMEM62Q0P6H9 643 aa19.34■□□□□ 0.69
CMTM3-201ENST00000361909 ART3Q13508 389 aa19.34■□□□□ 0.69
CMTM3-201ENST00000361909 ZNF699Q32M78 642 aa19.34■□□□□ 0.69
CMTM3-201ENST00000361909 GRTP1Q5TC63 336 aa19.34■□□□□ 0.69
CMTM3-201ENST00000361909 HACE1Q8IYU2 909 aa19.34■□□□□ 0.69
CMTM3-201ENST00000361909 RCN3Q96D15 328 aa19.34■□□□□ 0.69
CMTM3-201ENST00000361909 KLHL32Q96NJ5 620 aa19.34■□□□□ 0.69
CMTM3-201ENST00000361909 CPNE1Q99829 537 aa19.34■□□□□ 0.69
CMTM3-201ENST00000361909 PFDN4Q9NQP4 134 aa19.34■□□□□ 0.69
CMTM3-201ENST00000361909 OLAHQ9NV23 265 aa19.34■□□□□ 0.69
CMTM3-201ENST00000361909 TDRKHQ9Y2W6 561 aaKnown RBP19.34■□□□□ 0.69
CMTM3-201ENST00000361909 RAP2CQ9Y3L5 183 aa19.34■□□□□ 0.69
CMTM3-201ENST00000361909 RNASEH2AO75792 299 aaKnown RBP19.33■□□□□ 0.69
CMTM3-201ENST00000361909 PGK1P00558 417 aa19.33■□□□□ 0.69
CMTM3-201ENST00000361909 CST3P01034 146 aaPredicted RBP19.33■□□□□ 0.69
CMTM3-201ENST00000361909 DARSP14868 501 aaKnown RBP19.33■□□□□ 0.69
CMTM3-201ENST00000361909 CD19P15391 556 aa19.33■□□□□ 0.69
CMTM3-201ENST00000361909 MS4A2Q01362 244 aa19.33■□□□□ 0.69
CMTM3-201ENST00000361909 ELMSAN1Q6PJG2 1045 aa19.33■□□□□ 0.69
CMTM3-201ENST00000361909 ISLR2Q6UXK2 745 aa19.33■□□□□ 0.69
CMTM3-201ENST00000361909 UNC5BQ8IZJ1 945 aa19.33■□□□□ 0.69
CMTM3-201ENST00000361909 KLHDC9Q8NEP7 349 aa19.33■□□□□ 0.69
CMTM3-201ENST00000361909 RDH11Q8TC12 318 aa19.33■□□□□ 0.69
CMTM3-201ENST00000361909 DNAJB3Q8WWF6 145 aa19.33■□□□□ 0.69
CMTM3-201ENST00000361909 ABHD8Q96I13 439 aa19.33■□□□□ 0.69
CMTM3-201ENST00000361909 OR52B2Q96RD2 323 aa19.33■□□□□ 0.69
CMTM3-201ENST00000361909 TMEM79Q9BSE2 394 aa19.33■□□□□ 0.69
CMTM3-201ENST00000361909 EFHD1Q9BUP0 239 aa19.33■□□□□ 0.69
CMTM3-201ENST00000361909 CAAP1Q9H8G2 361 aa19.33■□□□□ 0.69
CMTM3-201ENST00000361909 FADS3Q9Y5Q0 445 aa19.33■□□□□ 0.69
CMTM3-201ENST00000361909 TRIP12Q14669 1992 aaPredicted RBP19.33■□□□□ 0.69
CMTM3-201ENST00000361909 CCDC162PA2VCL2 907 aa19.33■□□□□ 0.68
CMTM3-201ENST00000361909 TRIM13O60858 407 aa19.33■□□□□ 0.68
CMTM3-201ENST00000361909 ESRRBO95718 433 aa19.33■□□□□ 0.68
CMTM3-201ENST00000361909 MPOP05164 745 aa19.33■□□□□ 0.68
CMTM3-201ENST00000361909 EPHA3P29320 983 aa19.33■□□□□ 0.68
CMTM3-201ENST00000361909 AXLP30530 894 aa19.33■□□□□ 0.68
CMTM3-201ENST00000361909 STT3AP46977 705 aa19.33■□□□□ 0.68
CMTM3-201ENST00000361909 TRAP1Q12931 704 aaKnown RBP19.33■□□□□ 0.68
CMTM3-201ENST00000361909 STILQ15468 1287 aa19.33■□□□□ 0.68
CMTM3-201ENST00000361909 SEL1L3Q68CR1 1132 aa19.33■□□□□ 0.68
CMTM3-201ENST00000361909 FIBCD1Q8N539 461 aa19.33■□□□□ 0.68
CMTM3-201ENST00000361909 PQLC3Q8N755 202 aa19.33■□□□□ 0.68
CMTM3-201ENST00000361909 PACRGLQ8N7B6 248 aa19.33■□□□□ 0.68
CMTM3-201ENST00000361909 DDHD1Q8NEL9 900 aa19.33■□□□□ 0.68
CMTM3-201ENST00000361909 SLC7A14Q8TBB6 771 aa19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms