RNA–Protein interactions for RNA: ENST00000361655.6

PCDH11X-202, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,126 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-202ENST00000361655 ARMC12Q5T9G4 340 aa5.58□□□□□ -1.52
PCDH11X-202ENST00000361655 THEMIS2Q5TEJ8 643 aa5.58□□□□□ -1.52
PCDH11X-202ENST00000361655 TTC39BQ5VTQ0 682 aaPredicted RBP5.58□□□□□ -1.52
PCDH11X-202ENST00000361655 MRNIPQ6NTE8 343 aa5.58□□□□□ -1.52
PCDH11X-202ENST00000361655 RHBDF2Q6PJF5 856 aa5.58□□□□□ -1.52
PCDH11X-202ENST00000361655 UNC5AQ6ZN44 842 aa5.58□□□□□ -1.52
PCDH11X-202ENST00000361655 SLC26A11Q86WA9 606 aa5.58□□□□□ -1.52
PCDH11X-202ENST00000361655 CRLF3Q8IUI8 442 aa5.58□□□□□ -1.52
PCDH11X-202ENST00000361655 CMTR2Q8IYT2 770 aaKnown RBP5.58□□□□□ -1.52
PCDH11X-202ENST00000361655 SLC39A11Q8N1S5 342 aa5.58□□□□□ -1.52
PCDH11X-202ENST00000361655 ARFGAP1Q8N6T3 406 aa5.58□□□□□ -1.52
PCDH11X-202ENST00000361655 PQLC3Q8N755 202 aa5.58□□□□□ -1.52
PCDH11X-202ENST00000361655 RTL3Q8N8U3 475 aaKnown RBP5.58□□□□□ -1.52
PCDH11X-202ENST00000361655 C2orf15Q8WU43 125 aaKnown RBP5.58□□□□□ -1.52
PCDH11X-202ENST00000361655 SUSD6Q92537 303 aa5.58□□□□□ -1.52
PCDH11X-202ENST00000361655 MCUR1Q96AQ8 359 aa5.58□□□□□ -1.52
PCDH11X-202ENST00000361655 SLC9A7Q96T83 725 aa5.58□□□□□ -1.52
PCDH11X-202ENST00000361655 VAT1Q99536 393 aa5.58□□□□□ -1.52
PCDH11X-202ENST00000361655 ROPN1BQ9BZX4 212 aaPredicted RBP5.58□□□□□ -1.52
PCDH11X-202ENST00000361655 BRD8Q9H0E9 1235 aa5.58□□□□□ -1.52
PCDH11X-202ENST00000361655 ROPN1Q9HAT0 212 aaPredicted RBP5.58□□□□□ -1.52
PCDH11X-202ENST00000361655 TMBIM4Q9HC24 238 aa5.58□□□□□ -1.52
PCDH11X-202ENST00000361655 DUS2Q9NX74 493 aaKnown RBP5.58□□□□□ -1.52
PCDH11X-202ENST00000361655 MTRRQ9UBK8 725 aa5.58□□□□□ -1.52
PCDH11X-202ENST00000361655 FAM50BQ9Y247 325 aa5.58□□□□□ -1.52
PCDH11X-202ENST00000361655 A0A1B0GVM2 712 aa5.58□□□□□ -1.52
PCDH11X-202ENST00000361655 LCHNA4D1U4 455 aa5.58□□□□□ -1.52
PCDH11X-202ENST00000361655 TCAF2A6NFQ2 919 aa5.58□□□□□ -1.52
PCDH11X-202ENST00000361655 CRTAMO95727 393 aa5.58□□□□□ -1.52
PCDH11X-202ENST00000361655 GLP2RO95838 553 aa5.58□□□□□ -1.52
PCDH11X-202ENST00000361655 FAM163BP0C2L3 166 aa5.58□□□□□ -1.52
PCDH11X-202ENST00000361655 TAC1P20366 129 aa5.58□□□□□ -1.52
PCDH11X-202ENST00000361655 PTPN3P26045 913 aa5.58□□□□□ -1.52
PCDH11X-202ENST00000361655 KPNA2P52292 529 aaKnown RBP5.58□□□□□ -1.52
PCDH11X-202ENST00000361655 ERVFC1P60507 584 aa5.58□□□□□ -1.52
PCDH11X-202ENST00000361655 DSC1Q08554 894 aa5.58□□□□□ -1.52
PCDH11X-202ENST00000361655 CSHL1Q14406 222 aa5.58□□□□□ -1.52
PCDH11X-202ENST00000361655 MS4A13Q5J8X5 152 aa5.58□□□□□ -1.52
PCDH11X-202ENST00000361655 ADGRF1Q5T601 910 aa5.58□□□□□ -1.52
PCDH11X-202ENST00000361655 TMCO4Q5TGY1 634 aa5.58□□□□□ -1.52
PCDH11X-202ENST00000361655 TRNP1Q6NT89 227 aa5.58□□□□□ -1.52
PCDH11X-202ENST00000361655 C16orf46Q6P387 395 aa5.58□□□□□ -1.52
PCDH11X-202ENST00000361655 ANKS1BQ7Z6G8 1248 aa5.58□□□□□ -1.52
PCDH11X-202ENST00000361655 SPATA6LQ8N4H0 392 aa5.58□□□□□ -1.52
PCDH11X-202ENST00000361655 CALML6Q8TD86 181 aa5.58□□□□□ -1.52
PCDH11X-202ENST00000361655 MFSD3Q96ES6 412 aa5.58□□□□□ -1.52
PCDH11X-202ENST00000361655 FAM96AQ9H5X1 160 aa5.58□□□□□ -1.52
PCDH11X-202ENST00000361655 LRRC4CQ9HCJ2 640 aa5.58□□□□□ -1.52
PCDH11X-202ENST00000361655 FBXO6Q9NRD1 293 aaPredicted RBP5.58□□□□□ -1.52
PCDH11X-202ENST00000361655 FGFR1OP2Q9NVK5 253 aa5.58□□□□□ -1.52
PCDH11X-202ENST00000361655 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.58□□□□□ -1.52
PCDH11X-202ENST00000361655 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.58□□□□□ -1.52
PCDH11X-202ENST00000361655 PPARGC1AQ9UBK2 798 aaKnown RBP5.58□□□□□ -1.52
PCDH11X-202ENST00000361655 TBX21Q9UL17 535 aa5.58□□□□□ -1.52
PCDH11X-202ENST00000361655 EFR3BQ9Y2G0 817 aa5.58□□□□□ -1.52
PCDH11X-202ENST00000361655 RWDD3Q9Y3V2 267 aa5.58□□□□□ -1.52
PCDH11X-202ENST00000361655 NME7Q9Y5B8 376 aa5.58□□□□□ -1.52
PCDH11X-202ENST00000361655 A0A0D9SEW6 157 aa5.58□□□□□ -1.52
PCDH11X-202ENST00000361655 SLC9A3R1O14745 358 aaPredicted RBP5.58□□□□□ -1.52
PCDH11X-202ENST00000361655 GRM6O15303 877 aa5.58□□□□□ -1.52
PCDH11X-202ENST00000361655 CHADO15335 359 aa5.58□□□□□ -1.52
PCDH11X-202ENST00000361655 TMEM63AO94886 807 aa5.58□□□□□ -1.52
PCDH11X-202ENST00000361655 CYP11A1P05108 521 aa5.58□□□□□ -1.52
PCDH11X-202ENST00000361655 LIG3P49916 1009 aa5.58□□□□□ -1.52
PCDH11X-202ENST00000361655 ZNF135P52742 658 aaPredicted RBP5.58□□□□□ -1.52
PCDH11X-202ENST00000361655 CDK18Q07002 472 aa5.58□□□□□ -1.52
PCDH11X-202ENST00000361655 C6orf163Q5TEZ5 329 aa5.58□□□□□ -1.52
PCDH11X-202ENST00000361655 ATG16L1Q676U5 607 aa5.58□□□□□ -1.52
PCDH11X-202ENST00000361655 FAM171BQ6P995 826 aa5.58□□□□□ -1.52
PCDH11X-202ENST00000361655 FBXL19Q6PCT2 694 aa5.58□□□□□ -1.52
PCDH11X-202ENST00000361655 RSPO2Q6UXX9 243 aaPredicted RBP5.58□□□□□ -1.52
PCDH11X-202ENST00000361655 ANKRD33Q7Z3H0 272 aa5.58□□□□□ -1.52
PCDH11X-202ENST00000361655 RD3Q7Z3Z2 195 aa5.58□□□□□ -1.52
PCDH11X-202ENST00000361655 SCD5Q86SK9 330 aa5.58□□□□□ -1.52
PCDH11X-202ENST00000361655 ARID3BQ8IVW6 561 aaPredicted RBP5.58□□□□□ -1.52
PCDH11X-202ENST00000361655 UBR7Q8N806 425 aa5.58□□□□□ -1.52
PCDH11X-202ENST00000361655 SLC35B2Q8TB61 432 aa5.58□□□□□ -1.52
PCDH11X-202ENST00000361655 RAB3IL1Q8TBN0 382 aa5.58□□□□□ -1.52
PCDH11X-202ENST00000361655 SNX19Q92543 992 aa5.58□□□□□ -1.52
PCDH11X-202ENST00000361655 NDNQ99608 321 aa5.58□□□□□ -1.52
PCDH11X-202ENST00000361655 NAT9Q9BTE0 207 aa5.58□□□□□ -1.52
PCDH11X-202ENST00000361655 OXCT2Q9BYC2 517 aaPredicted RBP5.58□□□□□ -1.52
PCDH11X-202ENST00000361655 SMOC2Q9H3U7 446 aa5.58□□□□□ -1.52
PCDH11X-202ENST00000361655 TMEM30AQ9NV96 361 aa5.58□□□□□ -1.52
PCDH11X-202ENST00000361655 MARCH5Q9NX47 278 aa5.58□□□□□ -1.52
PCDH11X-202ENST00000361655 CLIC5Q9NZA1 410 aa5.58□□□□□ -1.52
PCDH11X-202ENST00000361655 DEC1Q9P2X7 70 aa5.58□□□□□ -1.52
PCDH11X-202ENST00000361655 RUVBL2Q9Y230 463 aaKnown RBP5.58□□□□□ -1.52
PCDH11X-202ENST00000361655 HBS1LQ9Y450 684 aaKnown RBP5.58□□□□□ -1.52
PCDH11X-202ENST00000361655 BRWD1Q9NSI6 2320 aa5.57□□□□□ -1.52
PCDH11X-202ENST00000361655 C1orf232A0A0U1RR37 186 aa5.57□□□□□ -1.52
PCDH11X-202ENST00000361655 ZNF840PA6NDX5 716 aa5.57□□□□□ -1.52
PCDH11X-202ENST00000361655 BAIAP3O94812 1187 aa5.57□□□□□ -1.52
PCDH11X-202ENST00000361655 RHOP08100 348 aa5.57□□□□□ -1.52
PCDH11X-202ENST00000361655 FGFR3P22607 806 aa5.57□□□□□ -1.52
PCDH11X-202ENST00000361655 MAGEA11P43364 429 aa5.57□□□□□ -1.52
PCDH11X-202ENST00000361655 SERPINB9P50453 376 aa5.57□□□□□ -1.52
PCDH11X-202ENST00000361655 PLK1P53350 603 aa5.57□□□□□ -1.52
PCDH11X-202ENST00000361655 AIF1P55008 147 aa5.57□□□□□ -1.52
PCDH11X-202ENST00000361655 SLC10A2Q12908 348 aaPredicted RBP5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms