RNA–Protein interactions for RNA: ENST00000360565.7

SCAF1-201, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SCAF1, Length 4,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-201ENST00000360565 DHDDSQ86SQ9 333 aa16.56■□□□□ 0.24
SCAF1-201ENST00000360565 RCN3Q96D15 328 aa16.56■□□□□ 0.24
SCAF1-201ENST00000360565 GMLQ99445 158 aa16.56■□□□□ 0.24
SCAF1-201ENST00000360565 CHRAC1Q9NRG0 131 aa16.56■□□□□ 0.24
SCAF1-201ENST00000360565 FAM32AQ9Y421 112 aaKnown RBP16.56■□□□□ 0.24
SCAF1-201ENST00000360565 A0A087X1B8 175 aa16.56■□□□□ 0.24
SCAF1-201ENST00000360565 LRPAP1P30533 357 aa16.56■□□□□ 0.24
SCAF1-201ENST00000360565 MSX2P35548 267 aaPredicted RBP16.56■□□□□ 0.24
SCAF1-201ENST00000360565 ST8SIA6P61647 398 aa16.56■□□□□ 0.24
SCAF1-201ENST00000360565 ELAVL2Q12926 359 aaKnown RBP16.56■□□□□ 0.24
SCAF1-201ENST00000360565 FRG1Q14331 258 aaKnown RBP16.56■□□□□ 0.24
SCAF1-201ENST00000360565 ADRM1Q16186 407 aa16.56■□□□□ 0.24
SCAF1-201ENST00000360565 LIPMQ5VYY2 423 aa16.56■□□□□ 0.24
SCAF1-201ENST00000360565 GLT6D1Q7Z4J2 308 aa16.56■□□□□ 0.24
SCAF1-201ENST00000360565 NIPA2Q8N8Q9 360 aa16.56■□□□□ 0.24
SCAF1-201ENST00000360565 VPS37AQ8NEZ2 397 aa16.56■□□□□ 0.24
SCAF1-201ENST00000360565 QKIQ96PU8 341 aaKnown RBP eCLIP16.56■□□□□ 0.24
SCAF1-201ENST00000360565 ACTR8Q9H981 624 aa16.56■□□□□ 0.24
SCAF1-201ENST00000360565 MAP2K5Q13163 448 aa16.55■□□□□ 0.24
SCAF1-201ENST00000360565 DMC1Q14565 340 aa16.55■□□□□ 0.24
SCAF1-201ENST00000360565 TTC7BQ86TV6 843 aa16.55■□□□□ 0.24
SCAF1-201ENST00000360565 NAT8LQ8N9F0 302 aa16.55■□□□□ 0.24
SCAF1-201ENST00000360565 SPATA17Q96L03 361 aa16.55■□□□□ 0.24
SCAF1-201ENST00000360565 C7orf26Q96N11 449 aa16.55■□□□□ 0.24
SCAF1-201ENST00000360565 TBC1D23Q9NUY8 699 aa16.55■□□□□ 0.24
SCAF1-201ENST00000360565 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.55■□□□□ 0.24
SCAF1-201ENST00000360565 RCOR3Q9P2K3 495 aaPredicted RBP16.55■□□□□ 0.24
SCAF1-201ENST00000360565 COPG2Q9UBF2 871 aa16.55■□□□□ 0.24
SCAF1-201ENST00000360565 MYH11P35749 1972 aa16.55■□□□□ 0.24
SCAF1-201ENST00000360565 SMIM35A0A1B0GVV1 85 aa16.55■□□□□ 0.24
SCAF1-201ENST00000360565 ZSCAN9O15535 394 aaPredicted RBP16.55■□□□□ 0.24
SCAF1-201ENST00000360565 TREHO43280 583 aa16.55■□□□□ 0.24
SCAF1-201ENST00000360565 C22orf31O95567 290 aa16.55■□□□□ 0.24
SCAF1-201ENST00000360565 ATP6V1B2P21281 511 aa16.55■□□□□ 0.24
SCAF1-201ENST00000360565 LMO2P25791 158 aa16.55■□□□□ 0.24
SCAF1-201ENST00000360565 KLRC2P26717 231 aa16.55■□□□□ 0.24
SCAF1-201ENST00000360565 CD52P31358 61 aa16.55■□□□□ 0.24
SCAF1-201ENST00000360565 WNT3AP56704 352 aa16.55■□□□□ 0.24
SCAF1-201ENST00000360565 MIER2Q8N344 545 aa16.55■□□□□ 0.24
SCAF1-201ENST00000360565 CRYGNQ8WXF5 182 aa16.55■□□□□ 0.24
SCAF1-201ENST00000360565 SEMA3CQ99985 751 aa16.55■□□□□ 0.24
SCAF1-201ENST00000360565 KCTD14Q9BQ13 255 aaPredicted RBP16.55■□□□□ 0.24
SCAF1-201ENST00000360565 RHOJQ9H4E5 214 aa16.55■□□□□ 0.24
SCAF1-201ENST00000360565 STN1Q9H668 368 aaKnown RBP16.55■□□□□ 0.24
SCAF1-201ENST00000360565 COG4Q9H9E3 785 aa16.55■□□□□ 0.24
SCAF1-201ENST00000360565 SSU72Q9NP77 194 aaKnown RBP16.55■□□□□ 0.24
SCAF1-201ENST00000360565 ZNF180Q9UJW8 692 aa16.55■□□□□ 0.24
SCAF1-201ENST00000360565 PHRF1Q9P1Y6 1649 aaKnown RBP16.55■□□□□ 0.24
SCAF1-201ENST00000360565 PTPRJQ12913 1337 aa16.55■□□□□ 0.24
SCAF1-201ENST00000360565 NUP98P52948 1817 aa16.55■□□□□ 0.24
SCAF1-201ENST00000360565 SYNDIG1LA6NDD5 238 aa16.55■□□□□ 0.24
SCAF1-201ENST00000360565 NFKBIEO00221 500 aa16.55■□□□□ 0.24
SCAF1-201ENST00000360565 TGDSO95455 350 aa16.55■□□□□ 0.24
SCAF1-201ENST00000360565 GAD2Q05329 585 aa16.55■□□□□ 0.24
SCAF1-201ENST00000360565 C1orf220Q5T0J3 134 aa16.55■□□□□ 0.24
SCAF1-201ENST00000360565 ELMSAN1Q6PJG2 1045 aa16.55■□□□□ 0.24
SCAF1-201ENST00000360565 DNAJC14Q6Y2X3 702 aaPredicted RBP16.55■□□□□ 0.24
SCAF1-201ENST00000360565 TTC30BQ8N4P2 665 aa16.55■□□□□ 0.24
SCAF1-201ENST00000360565 CLEC4CQ8WTT0 213 aa16.55■□□□□ 0.24
SCAF1-201ENST00000360565 SOCS4Q8WXH5 440 aa16.55■□□□□ 0.24
SCAF1-201ENST00000360565 MRPS31Q92665 395 aaKnown RBP16.55■□□□□ 0.24
SCAF1-201ENST00000360565 LPIN3Q9BQK8 851 aa16.55■□□□□ 0.24
SCAF1-201ENST00000360565 SEMA4BQ9NPR2 832 aaPredicted RBP16.55■□□□□ 0.24
SCAF1-201ENST00000360565 SEPT3Q9UH03 358 aa16.55■□□□□ 0.24
SCAF1-201ENST00000360565 COL1A2P08123 1366 aa16.55■□□□□ 0.24
SCAF1-201ENST00000360565 ARIH2O95376 493 aa16.54■□□□□ 0.24
SCAF1-201ENST00000360565 METTL18O95568 372 aa16.54■□□□□ 0.24
SCAF1-201ENST00000360565 SLC2A4P14672 509 aa16.54■□□□□ 0.24
SCAF1-201ENST00000360565 PTGR2Q8N8N7 351 aaPredicted RBP16.54■□□□□ 0.24
SCAF1-201ENST00000360565 NSMCE2Q96MF7 247 aa16.54■□□□□ 0.24
SCAF1-201ENST00000360565 UBA2Q9UBT2 640 aaPredicted RBP16.54■□□□□ 0.24
SCAF1-201ENST00000360565 LZTS1Q9Y250 596 aa16.54■□□□□ 0.24
SCAF1-201ENST00000360565 CNTNAP1P78357 1384 aa16.54■□□□□ 0.24
SCAF1-201ENST00000360565 MANSC4A6NHS7 340 aaPredicted RBP16.54■□□□□ 0.24
SCAF1-201ENST00000360565 M0R3G1 203 aa16.54■□□□□ 0.24
SCAF1-201ENST00000360565 WFS1O76024 890 aa16.54■□□□□ 0.24
SCAF1-201ENST00000360565 FGFR3P22607 806 aa16.54■□□□□ 0.24
SCAF1-201ENST00000360565 DAB2P98082 770 aa16.54■□□□□ 0.24
SCAF1-201ENST00000360565 KRT72Q14CN4 511 aa16.54■□□□□ 0.24
SCAF1-201ENST00000360565 FAM126BQ8IXS8 530 aa16.54■□□□□ 0.24
SCAF1-201ENST00000360565 OR52K2Q8NGK3 314 aa16.54■□□□□ 0.24
SCAF1-201ENST00000360565 MAGEC3Q8TD91 643 aa16.54■□□□□ 0.24
SCAF1-201ENST00000360565 DTLQ9NZJ0 730 aa16.54■□□□□ 0.24
SCAF1-201ENST00000360565 POLG2Q9UHN1 485 aa16.54■□□□□ 0.24
SCAF1-201ENST00000360565 CICQ96RK0 1608 aaPredicted RBP16.54■□□□□ 0.24
SCAF1-201ENST00000360565 MYH15Q9Y2K3 1946 aa16.54■□□□□ 0.24
SCAF1-201ENST00000360565 PEX1O43933 1283 aa16.54■□□□□ 0.24
SCAF1-201ENST00000360565 CCNT2O60583 730 aaKnown RBP16.54■□□□□ 0.24
SCAF1-201ENST00000360565 GCATO75600 419 aa16.54■□□□□ 0.24
SCAF1-201ENST00000360565 TNFAIP8O95379 198 aa16.54■□□□□ 0.24
SCAF1-201ENST00000360565 NDUFV1P49821 464 aa16.54■□□□□ 0.24
SCAF1-201ENST00000360565 CYP51A1Q16850 503 aa16.54■□□□□ 0.24
SCAF1-201ENST00000360565 VWA5B1Q5TIE3 1220 aa16.54■□□□□ 0.24
SCAF1-201ENST00000360565 OTOP3Q7RTS5 596 aa16.54■□□□□ 0.24
SCAF1-201ENST00000360565 HORMAD1Q86X24 394 aa16.54■□□□□ 0.24
SCAF1-201ENST00000360565 P3H2Q8IVL5 708 aa16.54■□□□□ 0.24
SCAF1-201ENST00000360565 TNIP2Q8NFZ5 429 aa16.54■□□□□ 0.24
SCAF1-201ENST00000360565 WDR70Q9NW82 654 aa16.54■□□□□ 0.24
SCAF1-201ENST00000360565 SLC12A4Q9UP95 1085 aa16.54■□□□□ 0.24
SCAF1-201ENST00000360565 TMEM114B3SHH9 223 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms