RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 GTPBP1O00178 669 aaKnown RBP9.8□□□□□ -0.84
CUX1-203ENST00000360264 CHADO15335 359 aa9.8□□□□□ -0.84
CUX1-203ENST00000360264 N4BP2L1Q5TBK1 243 aaPredicted RBP9.8□□□□□ -0.84
CUX1-203ENST00000360264 ZNF549Q6P9A3 640 aa9.8□□□□□ -0.84
CUX1-203ENST00000360264 SAMD7Q7Z3H4 446 aa9.8□□□□□ -0.84
CUX1-203ENST00000360264 CD101Q93033 1021 aa9.8□□□□□ -0.84
CUX1-203ENST00000360264 MTFR1LQ9H019 292 aa9.8□□□□□ -0.84
CUX1-203ENST00000360264 A0A096LPK6 155 aa9.8□□□□□ -0.84
CUX1-203ENST00000360264 IGFALSP35858 605 aa9.8□□□□□ -0.84
CUX1-203ENST00000360264 CBX5P45973 191 aa9.8□□□□□ -0.84
CUX1-203ENST00000360264 FBXW10Q5XX13 1052 aa9.8□□□□□ -0.84
CUX1-203ENST00000360264 BTBD9Q96Q07 612 aa9.8□□□□□ -0.84
CUX1-203ENST00000360264 SNTG2Q9NY99 539 aa9.8□□□□□ -0.84
CUX1-203ENST00000360264 UNC13BO14795 1591 aa9.8□□□□□ -0.84
CUX1-203ENST00000360264 ADH1CP00326 375 aa9.8□□□□□ -0.84
CUX1-203ENST00000360264 RPA3P35244 121 aaPredicted RBP9.8□□□□□ -0.84
CUX1-203ENST00000360264 GLRBP48167 497 aa9.8□□□□□ -0.84
CUX1-203ENST00000360264 LRRC34Q8IZ02 419 aa9.8□□□□□ -0.84
CUX1-203ENST00000360264 CXorf40AQ8TE69 158 aa9.8□□□□□ -0.84
CUX1-203ENST00000360264 TAAR1Q96RJ0 339 aa9.8□□□□□ -0.84
CUX1-203ENST00000360264 FRMPD4Q14CM0 1322 aa9.8□□□□□ -0.84
CUX1-203ENST00000360264 MAGEB3O15480 346 aa9.8□□□□□ -0.84
CUX1-203ENST00000360264 PROSCO94903 275 aa9.8□□□□□ -0.84
CUX1-203ENST00000360264 ETS1P14921 441 aa9.8□□□□□ -0.84
CUX1-203ENST00000360264 AMD1P17707 334 aa9.8□□□□□ -0.84
CUX1-203ENST00000360264 ADORA2AP29274 412 aa9.8□□□□□ -0.84
CUX1-203ENST00000360264 NEDD8Q15843 81 aa9.8□□□□□ -0.84
CUX1-203ENST00000360264 COQ7Q99807 217 aa9.8□□□□□ -0.84
CUX1-203ENST00000360264 SMURF2Q9HAU4 748 aa9.8□□□□□ -0.84
CUX1-203ENST00000360264 MYRFQ9Y2G1 1151 aa9.8□□□□□ -0.84
CUX1-203ENST00000360264 FRMPD1Q5SYB0 1578 aa9.8□□□□□ -0.84
CUX1-203ENST00000360264 TBC1D3BA6NDS4 549 aa9.8□□□□□ -0.84
CUX1-203ENST00000360264 IFNA16P05015 189 aa9.8□□□□□ -0.84
CUX1-203ENST00000360264 R3HDM1Q15032 1099 aaKnown RBP9.8□□□□□ -0.84
CUX1-203ENST00000360264 FAXCQ5TGI0 409 aa9.8□□□□□ -0.84
CUX1-203ENST00000360264 ZPBP2Q6X784 338 aa9.8□□□□□ -0.84
CUX1-203ENST00000360264 ZKSCAN4Q969J2 545 aaPredicted RBP9.8□□□□□ -0.84
CUX1-203ENST00000360264 APBA2Q99767 749 aa9.8□□□□□ -0.84
CUX1-203ENST00000360264 PPIEQ9UNP9 301 aaKnown RBP9.8□□□□□ -0.84
CUX1-203ENST00000360264 MRPS33Q9Y291 106 aaKnown RBP9.8□□□□□ -0.84
CUX1-203ENST00000360264 CATP04040 527 aaKnown RBP9.8□□□□□ -0.84
CUX1-203ENST00000360264 EIF4BP23588 611 aaKnown RBP9.8□□□□□ -0.84
CUX1-203ENST00000360264 PRAMEF18Q5VWM3 479 aa9.8□□□□□ -0.84
CUX1-203ENST00000360264 RAP1GAPP47736 663 aa9.8□□□□□ -0.84
CUX1-203ENST00000360264 TRIM40Q6P9F5 258 aa9.8□□□□□ -0.84
CUX1-203ENST00000360264 LPCAT2Q7L5N7 544 aa9.8□□□□□ -0.84
CUX1-203ENST00000360264 HAVCR1Q96D42 359 aa9.8□□□□□ -0.84
CUX1-203ENST00000360264 FDXACB1Q9BRP7 624 aaPredicted RBP9.8□□□□□ -0.84
CUX1-203ENST00000360264 GPN3Q9UHW5 284 aaPredicted RBP9.8□□□□□ -0.84
CUX1-203ENST00000360264 EIF4E1BA6NMX2 242 aaKnown RBP9.8□□□□□ -0.84
CUX1-203ENST00000360264 HOXC12P31275 282 aa9.8□□□□□ -0.84
CUX1-203ENST00000360264 UGT1A5P35504 534 aa9.8□□□□□ -0.84
CUX1-203ENST00000360264 ERVK-24P63145 666 aa9.8□□□□□ -0.84
CUX1-203ENST00000360264 RRP1BQ14684 758 aaKnown RBP9.8□□□□□ -0.84
CUX1-203ENST00000360264 RASA2Q15283 850 aa9.8□□□□□ -0.84
CUX1-203ENST00000360264 FAM131BQ86XD5 332 aa9.8□□□□□ -0.84
CUX1-203ENST00000360264 GJB7Q6PEY0 223 aa9.8□□□□□ -0.84
CUX1-203ENST00000360264 PHF10Q8WUB8 498 aaKnown RBP9.8□□□□□ -0.84
CUX1-203ENST00000360264 SOHLH2Q9NX45 425 aa9.8□□□□□ -0.84
CUX1-203ENST00000360264 PCDHA11Q9Y5I1 949 aa9.8□□□□□ -0.84
CUX1-203ENST00000360264 PLK4O00444 970 aa9.8□□□□□ -0.84
CUX1-203ENST00000360264 KCNQ2O43526 872 aa9.8□□□□□ -0.84
CUX1-203ENST00000360264 VIL1P09327 827 aaKnown RBP9.8□□□□□ -0.84
CUX1-203ENST00000360264 ME2P23368 584 aa9.8□□□□□ -0.84
CUX1-203ENST00000360264 CAPGP40121 348 aa9.8□□□□□ -0.84
CUX1-203ENST00000360264 CCDC185Q8N715 623 aa9.8□□□□□ -0.84
CUX1-203ENST00000360264 MIEF2Q96C03 454 aa9.8□□□□□ -0.84
CUX1-203ENST00000360264 C3orf14Q9HBI5 128 aa9.8□□□□□ -0.84
CUX1-203ENST00000360264 TAF6LQ9Y6J9 622 aa9.8□□□□□ -0.84
CUX1-203ENST00000360264 ZC3H13Q5T200 1668 aaKnown RBP9.8□□□□□ -0.84
CUX1-203ENST00000360264 BMP7P18075 431 aa9.8□□□□□ -0.84
CUX1-203ENST00000360264 LRRC74BQ6ZQY2 392 aa9.8□□□□□ -0.84
CUX1-203ENST00000360264 KCNN2Q9H2S1 579 aa9.8□□□□□ -0.84
CUX1-203ENST00000360264 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.8□□□□□ -0.843e-7■■■□□ 17.9
CUX1-203ENST00000360264 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.79□□□□□ -0.84
CUX1-203ENST00000360264 ENO4A6NNW6 628 aa9.79□□□□□ -0.84
CUX1-203ENST00000360264 LTFP02788 710 aa9.79□□□□□ -0.84
CUX1-203ENST00000360264 TRAF3Q13114 568 aa9.79□□□□□ -0.84
CUX1-203ENST00000360264 LPCAT1Q8NF37 534 aa9.79□□□□□ -0.84
CUX1-203ENST00000360264 KCNS3Q9BQ31 491 aa9.79□□□□□ -0.84
CUX1-203ENST00000360264 CDHR5Q9HBB8 845 aa9.79□□□□□ -0.84
CUX1-203ENST00000360264 UBTFL6P0CB48 400 aaPredicted RBP9.79□□□□□ -0.84
CUX1-203ENST00000360264 IZUMO2Q6UXV1 221 aa9.79□□□□□ -0.84
CUX1-203ENST00000360264 ANKRD7Q92527 254 aa9.79□□□□□ -0.84
CUX1-203ENST00000360264 MYLPFQ96A32 169 aa9.79□□□□□ -0.84
CUX1-203ENST00000360264 NCOR1O75376 2440 aa9.79□□□□□ -0.84
CUX1-203ENST00000360264 KPNA3O00505 521 aaPredicted RBP9.79□□□□□ -0.84
CUX1-203ENST00000360264 KHDRBS3O75525 346 aaKnown RBP9.79□□□□□ -0.84
CUX1-203ENST00000360264 INSRRP14616 1297 aa9.79□□□□□ -0.84
CUX1-203ENST00000360264 FAUP35544 74 aaKnown RBP9.79□□□□□ -0.84
CUX1-203ENST00000360264 IRAK1P51617 712 aa9.79□□□□□ -0.84
CUX1-203ENST00000360264 DEFB128Q7Z7B8 93 aa9.79□□□□□ -0.84
CUX1-203ENST00000360264 WNT8BQ93098 351 aa9.79□□□□□ -0.84
CUX1-203ENST00000360264 TRIM2Q9C040 744 aa9.79□□□□□ -0.84
CUX1-203ENST00000360264 POMKQ9H5K3 350 aa9.79□□□□□ -0.84
CUX1-203ENST00000360264 ZFYVE1Q9HBF4 777 aa9.79□□□□□ -0.84
CUX1-203ENST00000360264 RWDD3Q9Y3V2 267 aa9.79□□□□□ -0.84
CUX1-203ENST00000360264 TARBP1Q13395 1621 aaKnown RBP9.79□□□□□ -0.84
CUX1-203ENST00000360264 AQP5P55064 265 aa9.79□□□□□ -0.84
CUX1-203ENST00000360264 INAVAQ3KP66 663 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms