RNA–Protein interactions for RNA: ENST00000359429.10

RPE-202, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPE, Length 2,569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-202ENST00000359429 KLHL23Q8NBE8 558 aa11.06□□□□□ -0.64
RPE-202ENST00000359429 DIS3LQ8TF46 1054 aaKnown RBP11.06□□□□□ -0.64
RPE-202ENST00000359429 SNRNP27Q8WVK2 155 aaKnown RBP11.06□□□□□ -0.64
RPE-202ENST00000359429 SPATA33Q96N06 139 aa11.06□□□□□ -0.64
RPE-202ENST00000359429 CAAP1Q9H8G2 361 aa11.06□□□□□ -0.64
RPE-202ENST00000359429 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.06□□□□□ -0.64
RPE-202ENST00000359429 RSL24D1Q9UHA3 163 aaKnown RBP11.06□□□□□ -0.64
RPE-202ENST00000359429 GJD2Q9UKL4 321 aa11.06□□□□□ -0.64
RPE-202ENST00000359429 PADI4Q9UM07 663 aa11.06□□□□□ -0.64
RPE-202ENST00000359429 RUVBL2Q9Y230 463 aaKnown RBP11.06□□□□□ -0.64
RPE-202ENST00000359429 ZNF510Q9Y2H8 683 aa11.06□□□□□ -0.64
RPE-202ENST00000359429 TARM1B6A8C7 271 aa11.05□□□□□ -0.64
RPE-202ENST00000359429 ZBTB24O43167 697 aaPredicted RBP11.05□□□□□ -0.64
RPE-202ENST00000359429 AP2A1O95782 977 aa11.05□□□□□ -0.64
RPE-202ENST00000359429 STAU1O95793 577 aaKnown RBP11.05□□□□□ -0.64
RPE-202ENST00000359429 DPEP1P16444 411 aa11.05□□□□□ -0.64
RPE-202ENST00000359429 ALDH3B2P48448 385 aa11.05□□□□□ -0.64
RPE-202ENST00000359429 HSPA13P48723 471 aa11.05□□□□□ -0.64
RPE-202ENST00000359429 SULT1E1P49888 294 aa11.05□□□□□ -0.64
RPE-202ENST00000359429 TXNL4AP83876 142 aaKnown RBP11.05□□□□□ -0.64
RPE-202ENST00000359429 TNFAIP2Q03169 654 aa11.05□□□□□ -0.64
RPE-202ENST00000359429 PRKAA1Q13131 559 aa11.05□□□□□ -0.64
RPE-202ENST00000359429 MTX3Q5HYI7 312 aa11.05□□□□□ -0.64
RPE-202ENST00000359429 ZNF618Q5T7W0 954 aa11.05□□□□□ -0.64
RPE-202ENST00000359429 TSTD2Q5T7W7 516 aa11.05□□□□□ -0.64
RPE-202ENST00000359429 LBX2Q6XYB7 198 aa11.05□□□□□ -0.64
RPE-202ENST00000359429 PSTKQ8IV42 348 aaKnown RBP11.05□□□□□ -0.64
RPE-202ENST00000359429 ALDH16A1Q8IZ83 802 aa11.05□□□□□ -0.64
RPE-202ENST00000359429 TRIML2Q8N7C3 387 aa11.05□□□□□ -0.64
RPE-202ENST00000359429 CAMKK2Q96RR4 588 aa11.05□□□□□ -0.64
RPE-202ENST00000359429 MLPHQ9BV36 600 aaPredicted RBP11.05□□□□□ -0.64
RPE-202ENST00000359429 CASS4Q9NQ75 786 aa11.05□□□□□ -0.64
RPE-202ENST00000359429 UBP1Q9NZI7 540 aa11.05□□□□□ -0.64
RPE-202ENST00000359429 BFARQ9NZS9 450 aa11.05□□□□□ -0.64
RPE-202ENST00000359429 GMPR2Q9P2T1 348 aaKnown RBP11.05□□□□□ -0.64
RPE-202ENST00000359429 TUBGCP4Q9UGJ1 667 aa11.05□□□□□ -0.64
RPE-202ENST00000359429 AP4S1Q9Y587 144 aa11.05□□□□□ -0.64
RPE-202ENST00000359429 SSC5DA1L4H1 1573 aa11.05□□□□□ -0.64
RPE-202ENST00000359429 ARHGEF37A1IGU5 675 aa11.05□□□□□ -0.64
RPE-202ENST00000359429 C19orf67A6NJJ6 358 aa11.05□□□□□ -0.64
RPE-202ENST00000359429 TRIM38O00635 465 aa11.05□□□□□ -0.64
RPE-202ENST00000359429 H6PDO95479 791 aa11.05□□□□□ -0.64
RPE-202ENST00000359429 SLC35E2BP0CK96 405 aa11.05□□□□□ -0.64
RPE-202ENST00000359429 PSME3P61289 254 aa11.05□□□□□ -0.64
RPE-202ENST00000359429 CTBSQ01459 385 aa11.05□□□□□ -0.64
RPE-202ENST00000359429 RFTN1Q14699 578 aaPredicted RBP11.05□□□□□ -0.64
RPE-202ENST00000359429 HERC3Q15034 1050 aa11.05□□□□□ -0.64
RPE-202ENST00000359429 DCAF6Q58WW2 860 aa11.05□□□□□ -0.64
RPE-202ENST00000359429 SH3D19Q5HYK7 790 aa11.05□□□□□ -0.64
RPE-202ENST00000359429 KCTD11Q693B1 232 aa11.05□□□□□ -0.64
RPE-202ENST00000359429 HMBOX1Q6NT76 420 aa11.05□□□□□ -0.64
RPE-202ENST00000359429 CYP2R1Q6VVX0 501 aa11.05□□□□□ -0.64
RPE-202ENST00000359429 STRADAQ7RTN6 431 aa11.05□□□□□ -0.64
RPE-202ENST00000359429 SETD3Q86TU7 594 aaPredicted RBP11.05□□□□□ -0.64
RPE-202ENST00000359429 MICALL2Q8IY33 904 aa11.05□□□□□ -0.64
RPE-202ENST00000359429 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.05□□□□□ -0.64
RPE-202ENST00000359429 RNF169Q8NCN4 708 aa11.05□□□□□ -0.64
RPE-202ENST00000359429 STYXQ8WUJ0 223 aa11.05□□□□□ -0.64
RPE-202ENST00000359429 C18orf25Q96B23 403 aaPredicted RBP11.05□□□□□ -0.64
RPE-202ENST00000359429 SCYL1Q96KG9 808 aa11.05□□□□□ -0.64
RPE-202ENST00000359429 APBA2Q99767 749 aa11.05□□□□□ -0.64
RPE-202ENST00000359429 CIB1Q99828 191 aa11.05□□□□□ -0.64
RPE-202ENST00000359429 IL22Q9GZX6 179 aa11.05□□□□□ -0.64
RPE-202ENST00000359429 ANLNQ9NQW6 1124 aa11.05□□□□□ -0.64
RPE-202ENST00000359429 XPR1Q9UBH6 696 aa11.05□□□□□ -0.64
RPE-202ENST00000359429 BCAP29Q9UHQ4 241 aa11.05□□□□□ -0.64
RPE-202ENST00000359429 CNOT11Q9UKZ1 510 aaKnown RBP11.05□□□□□ -0.64
RPE-202ENST00000359429 PRORSD1PA6NEY8 169 aa11.04□□□□□ -0.64
RPE-202ENST00000359429 H3BNH8 94 aa11.04□□□□□ -0.64
RPE-202ENST00000359429 I6L893 689 aaPredicted RBP11.04□□□□□ -0.64
RPE-202ENST00000359429 SDHDO14521 159 aa11.04□□□□□ -0.64
RPE-202ENST00000359429 SLC22A2O15244 555 aa11.04□□□□□ -0.64
RPE-202ENST00000359429 TIMM44O43615 452 aa11.04□□□□□ -0.64
RPE-202ENST00000359429 H2AFYO75367 372 aaKnown RBP11.04□□□□□ -0.64
RPE-202ENST00000359429 CABYRO75952 493 aa11.04□□□□□ -0.64
RPE-202ENST00000359429 IMPDH2P12268 514 aa11.04□□□□□ -0.64
RPE-202ENST00000359429 CKMT2P17540 419 aa11.04□□□□□ -0.64
RPE-202ENST00000359429 MATKP42679 507 aa11.04□□□□□ -0.64
RPE-202ENST00000359429 CDK9P50750 372 aaKnown RBP11.04□□□□□ -0.64
RPE-202ENST00000359429 CLCN2P51788 898 aa11.04□□□□□ -0.64
RPE-202ENST00000359429 TRIM25Q14258 630 aaKnown RBP11.04□□□□□ -0.64
RPE-202ENST00000359429 LPIN1Q14693 890 aa11.04□□□□□ -0.64
RPE-202ENST00000359429 FAM187BQ17R55 369 aa11.04□□□□□ -0.64
RPE-202ENST00000359429 GLRA4Q5JXX5 417 aa11.04□□□□□ -0.64
RPE-202ENST00000359429 DCAF15Q66K64 600 aa11.04□□□□□ -0.64
RPE-202ENST00000359429 MAMDC4Q6UXC1 1216 aa11.04□□□□□ -0.64
RPE-202ENST00000359429 TRIM67Q6ZTA4 783 aa11.04□□□□□ -0.64
RPE-202ENST00000359429 MFSD6LQ8IWD5 586 aa11.04□□□□□ -0.64
RPE-202ENST00000359429 FBXO16Q8IX29 292 aaPredicted RBP11.04□□□□□ -0.64
RPE-202ENST00000359429 CCNYL1Q8N7R7 359 aa11.04□□□□□ -0.64
RPE-202ENST00000359429 CNTD1Q8N815 330 aa11.04□□□□□ -0.64
RPE-202ENST00000359429 SREK1Q8WXA9 508 aaKnown RBP11.04□□□□□ -0.64
RPE-202ENST00000359429 FAM149B1Q96BN6 582 aa11.04□□□□□ -0.64
RPE-202ENST00000359429 ASB9Q96DX5 294 aa11.04□□□□□ -0.64
RPE-202ENST00000359429 TMEM79Q9BSE2 394 aa11.04□□□□□ -0.64
RPE-202ENST00000359429 NFKBIZQ9BYH8 718 aa11.04□□□□□ -0.64
RPE-202ENST00000359429 TNFRSF12AQ9NP84 129 aa11.04□□□□□ -0.64
RPE-202ENST00000359429 TDRKHQ9Y2W6 561 aaKnown RBP11.04□□□□□ -0.64
RPE-202ENST00000359429 FIS1Q9Y3D6 152 aa11.04□□□□□ -0.64
RPE-202ENST00000359429 SNX13Q9Y5W8 968 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms