RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 TNFSF13BQ9Y275 285 aa10.3□□□□□ -0.76
PTPRA-203ENST00000356147 ANKRD12Q6UB98 2062 aa10.3□□□□□ -0.76
PTPRA-203ENST00000356147 PRORSD1PA6NEY8 169 aa10.29□□□□□ -0.76
PTPRA-203ENST00000356147 C9IYK1 514 aa10.29□□□□□ -0.76
PTPRA-203ENST00000356147 CLDN5O00501 218 aa10.29□□□□□ -0.76
PTPRA-203ENST00000356147 DPYSL4O14531 572 aa10.29□□□□□ -0.76
PTPRA-203ENST00000356147 DLX3O60479 287 aa10.29□□□□□ -0.76
PTPRA-203ENST00000356147 PRDX6P30041 224 aa10.29□□□□□ -0.76
PTPRA-203ENST00000356147 NR2C2P49116 596 aa10.29□□□□□ -0.76
PTPRA-203ENST00000356147 GJA9P57773 515 aa10.29□□□□□ -0.76
PTPRA-203ENST00000356147 CTBSQ01459 385 aa10.29□□□□□ -0.76
PTPRA-203ENST00000356147 PLOD1Q02809 727 aaPredicted RBP10.29□□□□□ -0.76
PTPRA-203ENST00000356147 POU5F1BQ06416 359 aa10.29□□□□□ -0.76
PTPRA-203ENST00000356147 CATSPERGQ6ZRH7 1159 aa10.29□□□□□ -0.76
PTPRA-203ENST00000356147 TMEM110Q86TL2 294 aa10.29□□□□□ -0.76
PTPRA-203ENST00000356147 CHERPQ8IWX8 916 aaKnown RBP10.29□□□□□ -0.76
PTPRA-203ENST00000356147 ZNF786Q8N393 782 aa10.29□□□□□ -0.76
PTPRA-203ENST00000356147 RNF169Q8NCN4 708 aa10.29□□□□□ -0.76
PTPRA-203ENST00000356147 ZMAT2Q96NC0 199 aaKnown RBP10.29□□□□□ -0.76
PTPRA-203ENST00000356147 PLEKHG4BQ96PX9 1271 aa10.29□□□□□ -0.76
PTPRA-203ENST00000356147 GPR20Q99678 358 aa10.29□□□□□ -0.76
PTPRA-203ENST00000356147 VPS33BQ9H267 617 aa10.29□□□□□ -0.76
PTPRA-203ENST00000356147 SOX17Q9H6I2 414 aaPredicted RBP10.29□□□□□ -0.76
PTPRA-203ENST00000356147 CYP3A43Q9HB55 503 aa10.29□□□□□ -0.76
PTPRA-203ENST00000356147 ZBTB26Q9HCK0 441 aa10.29□□□□□ -0.76
PTPRA-203ENST00000356147 PDGFCQ9NRA1 345 aa10.29□□□□□ -0.76
PTPRA-203ENST00000356147 AURKCQ9UQB9 309 aa10.29□□□□□ -0.76
PTPRA-203ENST00000356147 CLEC11AQ9Y240 323 aa10.29□□□□□ -0.76
PTPRA-203ENST00000356147 ZNF510Q9Y2H8 683 aa10.29□□□□□ -0.76
PTPRA-203ENST00000356147 FER1L6Q2WGJ9 1857 aa10.29□□□□□ -0.76
PTPRA-203ENST00000356147 ICAM3P32942 547 aa10.29□□□□□ -0.76
PTPRA-203ENST00000356147 RBP5P82980 135 aa10.29□□□□□ -0.76
PTPRA-203ENST00000356147 AGKQ53H12 422 aa10.29□□□□□ -0.76
PTPRA-203ENST00000356147 SYPL2Q5VXT5 272 aa10.29□□□□□ -0.76
PTPRA-203ENST00000356147 LRRC8EQ6NSJ5 796 aa10.29□□□□□ -0.76
PTPRA-203ENST00000356147 POTEHQ6S545 545 aa10.29□□□□□ -0.76
PTPRA-203ENST00000356147 METTL7BQ6UX53 244 aa10.29□□□□□ -0.76
PTPRA-203ENST00000356147 SLC2A14Q8TDB8 520 aa10.29□□□□□ -0.76
PTPRA-203ENST00000356147 SLC2A11Q9BYW1 496 aa10.29□□□□□ -0.76
PTPRA-203ENST00000356147 C2orf40Q9H1Z8 148 aa10.29□□□□□ -0.76
PTPRA-203ENST00000356147 LRRC40Q9H9A6 602 aa10.29□□□□□ -0.76
PTPRA-203ENST00000356147 RRN3Q9NYV6 651 aa10.29□□□□□ -0.76
PTPRA-203ENST00000356147 BFARQ9NZS9 450 aa10.29□□□□□ -0.76
PTPRA-203ENST00000356147 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.29□□□□□ -0.76
PTPRA-203ENST00000356147 SOCS2O14508 198 aa10.29□□□□□ -0.76
PTPRA-203ENST00000356147 AKAP10O43572 662 aa10.29□□□□□ -0.76
PTPRA-203ENST00000356147 MLNP12872 115 aa10.29□□□□□ -0.76
PTPRA-203ENST00000356147 INCA1Q0VD86 236 aa10.29□□□□□ -0.76
PTPRA-203ENST00000356147 ADIGQ0VDE8 80 aa10.29□□□□□ -0.76
PTPRA-203ENST00000356147 LIPMQ5VYY2 423 aa10.29□□□□□ -0.76
PTPRA-203ENST00000356147 METTL21CQ5VZV1 264 aa10.29□□□□□ -0.76
PTPRA-203ENST00000356147 ZFP1Q6P2D0 407 aa10.29□□□□□ -0.76
PTPRA-203ENST00000356147 CEP97Q8IW35 865 aa10.29□□□□□ -0.76
PTPRA-203ENST00000356147 TMEM151AQ8N4L1 468 aa10.29□□□□□ -0.76
PTPRA-203ENST00000356147 SREK1Q8WXA9 508 aaKnown RBP10.29□□□□□ -0.76
PTPRA-203ENST00000356147 SLCO4A1Q96BD0 722 aa10.29□□□□□ -0.76
PTPRA-203ENST00000356147 LRCH3Q96II8 777 aa10.29□□□□□ -0.76
PTPRA-203ENST00000356147 ZBED3Q96IU2 234 aaPredicted RBP10.29□□□□□ -0.76
PTPRA-203ENST00000356147 CELF6Q96J87 481 aaKnown RBP10.29□□□□□ -0.76
PTPRA-203ENST00000356147 DRC3Q9H069 523 aa10.29□□□□□ -0.76
PTPRA-203ENST00000356147 ATXN3LQ9H3M9 355 aa10.29□□□□□ -0.76
PTPRA-203ENST00000356147 SPON1Q9HCB6 807 aa10.29□□□□□ -0.76
PTPRA-203ENST00000356147 FBRSL1Q9HCM7 1045 aaKnown RBP10.29□□□□□ -0.76
PTPRA-203ENST00000356147 OLAHQ9NV23 265 aa10.29□□□□□ -0.76
PTPRA-203ENST00000356147 GIMAP2Q9UG22 337 aa10.29□□□□□ -0.76
PTPRA-203ENST00000356147 USP3Q9Y6I4 520 aa10.29□□□□□ -0.76
PTPRA-203ENST00000356147 M0QYT0 321 aa10.28□□□□□ -0.76
PTPRA-203ENST00000356147 ONECUT3O60422 494 aaPredicted RBP10.28□□□□□ -0.76
PTPRA-203ENST00000356147 H6PDO95479 791 aa10.28□□□□□ -0.76
PTPRA-203ENST00000356147 MT-ND1P03886 318 aa10.28□□□□□ -0.76
PTPRA-203ENST00000356147 ZFXP17010 805 aaPredicted RBP10.28□□□□□ -0.76
PTPRA-203ENST00000356147 GABRB3P28472 473 aa10.28□□□□□ -0.76
PTPRA-203ENST00000356147 GNL1P36915 607 aaPredicted RBP10.28□□□□□ -0.76
PTPRA-203ENST00000356147 SH3BGRP55822 239 aaPredicted RBP10.28□□□□□ -0.76
PTPRA-203ENST00000356147 NAA20P61599 178 aa10.28□□□□□ -0.76
PTPRA-203ENST00000356147 YBX1P67809 324 aaKnown RBP10.28□□□□□ -0.76
PTPRA-203ENST00000356147 POU6F1Q14863 301 aa10.28□□□□□ -0.76
PTPRA-203ENST00000356147 DBN1Q16643 649 aa10.28□□□□□ -0.76
PTPRA-203ENST00000356147 PKDCCQ504Y2 493 aa10.28□□□□□ -0.76
PTPRA-203ENST00000356147 SPANXN3Q5MJ09 141 aa10.28□□□□□ -0.76
PTPRA-203ENST00000356147 HMBOX1Q6NT76 420 aa10.28□□□□□ -0.76
PTPRA-203ENST00000356147 CNSTQ6PJW8 725 aa10.28□□□□□ -0.76
PTPRA-203ENST00000356147 HFE2Q6ZVN8 426 aa10.28□□□□□ -0.76
PTPRA-203ENST00000356147 CLEC14AQ86T13 490 aa10.28□□□□□ -0.76
PTPRA-203ENST00000356147 GOLGA2P5Q9HBQ8 144 aa10.28□□□□□ -0.76
PTPRA-203ENST00000356147 KLK14Q9P0G3 267 aa10.28□□□□□ -0.76
PTPRA-203ENST00000356147 EGFL7Q9UHF1 273 aa10.28□□□□□ -0.76
PTPRA-203ENST00000356147 MTF2Q9Y483 593 aaPredicted RBP10.28□□□□□ -0.76
PTPRA-203ENST00000356147 PCDHGA7Q9Y5G6 932 aa10.28□□□□□ -0.76
PTPRA-203ENST00000356147 ANK1P16157 1881 aa10.28□□□□□ -0.76
PTPRA-203ENST00000356147 CITO14578 2027 aa10.28□□□□□ -0.76
PTPRA-203ENST00000356147 AURKAO14965 403 aa10.28□□□□□ -0.76
PTPRA-203ENST00000356147 DPEP1P16444 411 aa10.28□□□□□ -0.76
PTPRA-203ENST00000356147 NFKB1P19838 968 aa10.28□□□□□ -0.76
PTPRA-203ENST00000356147 PTPN3P26045 913 aa10.28□□□□□ -0.76
PTPRA-203ENST00000356147 GRIA3P42263 894 aa10.28□□□□□ -0.76
PTPRA-203ENST00000356147 YAP1P46937 504 aaKnown RBP10.28□□□□□ -0.76
PTPRA-203ENST00000356147 SLC5A3P53794 718 aa10.28□□□□□ -0.76
PTPRA-203ENST00000356147 ZBTB17Q13105 803 aa10.28□□□□□ -0.76
PTPRA-203ENST00000356147 XKR5Q6UX68 686 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms