RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 FBXW8Q8N3Y1 598 aa15.06■□□□□ 0
LMX1B-201ENST00000355497 ZNF304Q9HCX3 659 aa15.06■□□□□ 0
LMX1B-201ENST00000355497 APOC4-APOC2K7ER74 178 aa15.06■□□□□ 0
LMX1B-201ENST00000355497 APOC2P02655 101 aa15.06■□□□□ 0
LMX1B-201ENST00000355497 HMGCRP04035 888 aa15.06■□□□□ 0
LMX1B-201ENST00000355497 SOX10P56693 466 aa15.06■□□□□ 0
LMX1B-201ENST00000355497 TMEM63BQ5T3F8 832 aa15.06■□□□□ 0
LMX1B-201ENST00000355497 ISLR2Q6UXK2 745 aa15.06■□□□□ 0
LMX1B-201ENST00000355497 LRRC17Q8N6Y2 441 aa15.06■□□□□ 0
LMX1B-201ENST00000355497 POC5Q8NA72 575 aa15.06■□□□□ 0
LMX1B-201ENST00000355497 ZNF540Q8NDQ6 660 aa15.06■□□□□ 0
LMX1B-201ENST00000355497 SKA1Q96BD8 255 aa15.06■□□□□ 0
LMX1B-201ENST00000355497 GMCL1Q96IK5 515 aa15.06■□□□□ 0
LMX1B-201ENST00000355497 MARK4Q96L34 752 aa15.06■□□□□ 0
LMX1B-201ENST00000355497 ELOVL4Q9GZR5 314 aa15.06■□□□□ 0
LMX1B-201ENST00000355497 NUDT5Q9UKK9 219 aa15.06■□□□□ 0
LMX1B-201ENST00000355497 MRPS7Q9Y2R9 242 aaKnown RBP15.06■□□□□ 0
LMX1B-201ENST00000355497 ATXN2Q99700 1313 aaKnown RBP15.06■□□□□ 0
LMX1B-201ENST00000355497 ANXA5P08758 320 aa15.06■□□□□ 0
LMX1B-201ENST00000355497 GRIA3P42263 894 aa15.06■□□□□ 0
LMX1B-201ENST00000355497 ACLYP53396 1101 aa15.06■□□□□ 0
LMX1B-201ENST00000355497 GCNT1Q02742 428 aa15.06■□□□□ 0
LMX1B-201ENST00000355497 STAG3L4Q8TBR4 150 aa15.06■□□□□ 0
LMX1B-201ENST00000355497 NELL1Q92832 810 aa15.06■□□□□ 0
LMX1B-201ENST00000355497 ABCB10Q9NRK6 738 aa15.06■□□□□ 0
LMX1B-201ENST00000355497 TMEM51Q9NW97 253 aa15.06■□□□□ 0
LMX1B-201ENST00000355497 MAP10Q9P2G4 905 aa15.06■□□□□ 0
LMX1B-201ENST00000355497 ITGA3P26006 1051 aa15.05■□□□□ 0
LMX1B-201ENST00000355497 PFKFB4Q16877 469 aa15.05■□□□□ 0
LMX1B-201ENST00000355497 SAPCD2Q86UD0 394 aa15.05■□□□□ 0
LMX1B-201ENST00000355497 SCUBE3Q8IX30 993 aa15.05■□□□□ 0
LMX1B-201ENST00000355497 WDR60Q8WVS4 1066 aa15.05■□□□□ 0
LMX1B-201ENST00000355497 BTBD9Q96Q07 612 aa15.05■□□□□ 0
LMX1B-201ENST00000355497 CRISPLD1Q9H336 500 aa15.05■□□□□ 0
LMX1B-201ENST00000355497 SLC35C2Q9NQQ7 365 aa15.05■□□□□ 0
LMX1B-201ENST00000355497 TULP4Q9NRJ4 1543 aa15.05■□□□□ 0
LMX1B-201ENST00000355497 OMPP47874 163 aa15.05■□□□□ 0
LMX1B-201ENST00000355497 PRKAG1P54619 331 aa15.05■□□□□ 0
LMX1B-201ENST00000355497 SMIM11AP58511 58 aa15.05■□□□□ 0
LMX1B-201ENST00000355497 PCID2Q5JVF3 399 aa15.05■□□□□ 0
LMX1B-201ENST00000355497 ADAM32Q8TC27 787 aa15.05■□□□□ 0
LMX1B-201ENST00000355497 FAIM2Q9BWQ8 316 aa15.05■□□□□ 0
LMX1B-201ENST00000355497 POPDC2Q9HBU9 364 aa15.05■□□□□ 0
LMX1B-201ENST00000355497 STARD7Q9NQZ5 370 aa15.05■□□□□ 0
LMX1B-201ENST00000355497 ERGIC3Q9Y282 383 aa15.05■□□□□ 0
LMX1B-201ENST00000355497 ASTN2O75129 1339 aaPredicted RBP15.05■□□□□ 0
LMX1B-201ENST00000355497 GLI2P10070 1586 aa15.05■□□□□ -0
LMX1B-201ENST00000355497 ZSCAN5CA6NGD5 496 aaPredicted RBP15.05■□□□□ -0
LMX1B-201ENST00000355497 AP3D1O14617 1153 aa15.05■□□□□ -0
LMX1B-201ENST00000355497 CHADO15335 359 aa15.05■□□□□ -0
LMX1B-201ENST00000355497 SNRPB2P08579 225 aaKnown RBP15.05■□□□□ -0
LMX1B-201ENST00000355497 CXCR2P25025 360 aa15.05■□□□□ -0
LMX1B-201ENST00000355497 KLRC2P26717 231 aa15.05■□□□□ -0
LMX1B-201ENST00000355497 GSTT1P30711 240 aa15.05■□□□□ -0
LMX1B-201ENST00000355497 CLK3P49761 638 aaKnown RBP15.05■□□□□ -0
LMX1B-201ENST00000355497 C16orf46Q6P387 395 aa15.05■□□□□ -0
LMX1B-201ENST00000355497 NKAPQ8N5F7 415 aaKnown RBP15.05■□□□□ -0
LMX1B-201ENST00000355497 TKTL2Q9H0I9 626 aa15.05■□□□□ -0
LMX1B-201ENST00000355497 ZDHHC6Q9H6R6 413 aa15.05■□□□□ -0
LMX1B-201ENST00000355497 LEF1Q9UJU2 399 aaPredicted RBP15.05■□□□□ -0
LMX1B-201ENST00000355497 CCDC162PA2VCL2 907 aa15.05■□□□□ -0
LMX1B-201ENST00000355497 LIN7AO14910 233 aaPredicted RBP15.05■□□□□ -0
LMX1B-201ENST00000355497 EPORP19235 508 aa15.05■□□□□ -0
LMX1B-201ENST00000355497 SERPINA4P29622 427 aa15.05■□□□□ -0
LMX1B-201ENST00000355497 ABATP80404 500 aa15.05■□□□□ -0
LMX1B-201ENST00000355497 PDK3Q15120 406 aa15.05■□□□□ -0
LMX1B-201ENST00000355497 GPAT3Q53EU6 434 aa15.05■□□□□ -0
LMX1B-201ENST00000355497 SLC27A1Q6PCB7 646 aa15.05■□□□□ -0
LMX1B-201ENST00000355497 CXXC5Q7LFL8 322 aaKnown RBP15.05■□□□□ -0
LMX1B-201ENST00000355497 TRAPPC5Q8IUR0 188 aa15.05■□□□□ -0
LMX1B-201ENST00000355497 KATNAL2Q8IYT4 538 aa15.05■□□□□ -0
LMX1B-201ENST00000355497 DNERQ8NFT8 737 aa15.05■□□□□ -0
LMX1B-201ENST00000355497 SPATA20Q8TB22 786 aa15.05■□□□□ -0
LMX1B-201ENST00000355497 S100ZQ8WXG8 99 aa15.05■□□□□ -0
LMX1B-201ENST00000355497 AP3S1Q92572 193 aa15.05■□□□□ -0
LMX1B-201ENST00000355497 ABCC3O15438 1527 aa15.05■□□□□ -0
LMX1B-201ENST00000355497 KCNK1O00180 336 aa15.05■□□□□ -0
LMX1B-201ENST00000355497 FSBPO95073 299 aa15.05■□□□□ -0
LMX1B-201ENST00000355497 DBTP11182 482 aaKnown RBP15.05■□□□□ -0
LMX1B-201ENST00000355497 COX4I1P13073 169 aa15.05■□□□□ -0
LMX1B-201ENST00000355497 POLR2EP19388 210 aaKnown RBP15.05■□□□□ -0
LMX1B-201ENST00000355497 RBL1P28749 1068 aa15.05■□□□□ -0
LMX1B-201ENST00000355497 NAA20P61599 178 aa15.05■□□□□ -0
LMX1B-201ENST00000355497 CBFBQ13951 182 aa15.05■□□□□ -0
LMX1B-201ENST00000355497 SLC45A4Q5BKX6 768 aa15.05■□□□□ -0
LMX1B-201ENST00000355497 ESRP1Q6NXG1 681 aaKnown RBP15.05■□□□□ -0
LMX1B-201ENST00000355497 LENG9Q96B70 501 aa15.05■□□□□ -0
LMX1B-201ENST00000355497 SETD4Q9NVD3 440 aa15.05■□□□□ -0
LMX1B-201ENST00000355497 SMPD4Q9NXE4 827 aa15.05■□□□□ -0
LMX1B-201ENST00000355497 ADAM28Q9UKQ2 775 aa15.05■□□□□ -0
LMX1B-201ENST00000355497 PSME2Q9UL46 239 aa15.05■□□□□ -0
LMX1B-201ENST00000355497 A8MX80 341 aa15.04■□□□□ -0
LMX1B-201ENST00000355497 CDC40O60508 579 aaKnown RBP eCLIP15.04■□□□□ -0
LMX1B-201ENST00000355497 S100GP29377 79 aa15.04■□□□□ -0
LMX1B-201ENST00000355497 MIPP30301 263 aa15.04■□□□□ -0
LMX1B-201ENST00000355497 TRAP1Q12931 704 aaKnown RBP15.04■□□□□ -0
LMX1B-201ENST00000355497 FAM171A1Q5VUB5 890 aa15.04■□□□□ -0
LMX1B-201ENST00000355497 TRPV3Q8NET8 790 aa15.04■□□□□ -0
LMX1B-201ENST00000355497 PSMA8Q8TAA3 256 aa15.04■□□□□ -0
LMX1B-201ENST00000355497 PTCD3Q96EY7 689 aaKnown RBP15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms