RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 FRMPD4Q14CM0 1322 aa12.87□□□□□ -0.35
SYNCRIP-201ENST00000355238 A0A0A0MRY4 1105 aa12.87□□□□□ -0.35
SYNCRIP-201ENST00000355238 RBAK-RBAKDNI3L0D1 243 aa12.87□□□□□ -0.35
SYNCRIP-201ENST00000355238 LTFP02788 710 aa12.87□□□□□ -0.35
SYNCRIP-201ENST00000355238 ITGA2P17301 1181 aa12.87□□□□□ -0.35
SYNCRIP-201ENST00000355238 AMPD1P23109 780 aa12.87□□□□□ -0.35
SYNCRIP-201ENST00000355238 CCR1P32246 355 aa12.87□□□□□ -0.35
SYNCRIP-201ENST00000355238 RTP1P59025 263 aa12.87□□□□□ -0.35
SYNCRIP-201ENST00000355238 PDCD4Q53EL6 469 aaKnown RBP12.87□□□□□ -0.35
SYNCRIP-201ENST00000355238 ANGEL2Q5VTE6 544 aaKnown RBP12.87□□□□□ -0.35
SYNCRIP-201ENST00000355238 DNAJB14Q8TBM8 379 aa12.87□□□□□ -0.35
SYNCRIP-201ENST00000355238 SPIRE2Q8WWL2 714 aa12.87□□□□□ -0.35
SYNCRIP-201ENST00000355238 SPATA13Q96N96 652 aa12.87□□□□□ -0.35
SYNCRIP-201ENST00000355238 TAS2R14Q9NYV8 317 aa12.87□□□□□ -0.35
SYNCRIP-201ENST00000355238 TRIM17Q9Y577 477 aa12.87□□□□□ -0.35
SYNCRIP-201ENST00000355238 CAMSAP1Q5T5Y3 1602 aa12.87□□□□□ -0.35
SYNCRIP-201ENST00000355238 PTPRUQ92729 1446 aa12.87□□□□□ -0.35
SYNCRIP-201ENST00000355238 HMGCRP04035 888 aa12.87□□□□□ -0.35
SYNCRIP-201ENST00000355238 S100A6P06703 90 aa12.87□□□□□ -0.35
SYNCRIP-201ENST00000355238 BPGMP07738 259 aa12.87□□□□□ -0.35
SYNCRIP-201ENST00000355238 GRK4P32298 578 aa12.87□□□□□ -0.35
SYNCRIP-201ENST00000355238 RUNDC3AQ59EK9 446 aa12.87□□□□□ -0.35
SYNCRIP-201ENST00000355238 ADGRF2Q8IZF7 708 aa12.87□□□□□ -0.35
SYNCRIP-201ENST00000355238 RASSF5Q8WWW0 418 aa12.87□□□□□ -0.35
SYNCRIP-201ENST00000355238 MRPL57Q9BQC6 102 aaKnown RBP12.87□□□□□ -0.35
SYNCRIP-201ENST00000355238 NMUR2Q9GZQ4 415 aa12.87□□□□□ -0.35
SYNCRIP-201ENST00000355238 MORF4L1Q9UBU8 362 aa12.87□□□□□ -0.35
SYNCRIP-201ENST00000355238 MAGEL2Q9UJ55 1249 aa12.87□□□□□ -0.35
SYNCRIP-201ENST00000355238 SH3BP1Q9Y3L3 701 aa12.87□□□□□ -0.35
SYNCRIP-201ENST00000355238 GSCP56915 257 aaPredicted RBP12.87□□□□□ -0.35
SYNCRIP-201ENST00000355238 LRRC55Q6ZSA7 311 aa12.87□□□□□ -0.35
SYNCRIP-201ENST00000355238 C7orf26Q96N11 449 aa12.87□□□□□ -0.35
SYNCRIP-201ENST00000355238 EMILIN2Q9BXX0 1053 aa12.87□□□□□ -0.35
SYNCRIP-201ENST00000355238 CEP41Q9BYV8 373 aa12.87□□□□□ -0.35
SYNCRIP-201ENST00000355238 SLC7A5P2Q9GIP4 190 aa12.87□□□□□ -0.35
SYNCRIP-201ENST00000355238 MUC13Q9H3R2 512 aa12.87□□□□□ -0.35
SYNCRIP-201ENST00000355238 TSPAN16Q9UKR8 245 aa12.87□□□□□ -0.35
SYNCRIP-201ENST00000355238 ASS1P00966 412 aaKnown RBP12.86□□□□□ -0.35
SYNCRIP-201ENST00000355238 SERPINF2P08697 491 aa12.86□□□□□ -0.35
SYNCRIP-201ENST00000355238 STAG3L1P0CL83 205 aa12.86□□□□□ -0.35
SYNCRIP-201ENST00000355238 IRF1P10914 325 aa12.86□□□□□ -0.35
SYNCRIP-201ENST00000355238 CCR3P51677 355 aa12.86□□□□□ -0.35
SYNCRIP-201ENST00000355238 MAMLD1Q13495 774 aa12.86□□□□□ -0.35
SYNCRIP-201ENST00000355238 ITGA7Q13683 1181 aa12.86□□□□□ -0.35
SYNCRIP-201ENST00000355238 MTX3Q5HYI7 312 aa12.86□□□□□ -0.35
SYNCRIP-201ENST00000355238 PSTKQ8IV42 348 aaKnown RBP12.86□□□□□ -0.35
SYNCRIP-201ENST00000355238 STAG3L4Q8TBR4 150 aa12.86□□□□□ -0.35
SYNCRIP-201ENST00000355238 MAN1C1Q9NR34 630 aa12.86□□□□□ -0.35
SYNCRIP-201ENST00000355238 F8VP50 259 aa12.86□□□□□ -0.35
SYNCRIP-201ENST00000355238 BTN3A1O00481 513 aa12.86□□□□□ -0.35
SYNCRIP-201ENST00000355238 UGT2B11O75310 529 aa12.86□□□□□ -0.35
SYNCRIP-201ENST00000355238 MICAL2O94851 1124 aa12.86□□□□□ -0.35
SYNCRIP-201ENST00000355238 MLYCDO95822 493 aa12.86□□□□□ -0.35
SYNCRIP-201ENST00000355238 SUPT20HL2P0C7V6 817 aa12.86□□□□□ -0.35
SYNCRIP-201ENST00000355238 TCF7P36402 384 aaPredicted RBP12.86□□□□□ -0.35
SYNCRIP-201ENST00000355238 SLC12A3P55017 1021 aa12.86□□□□□ -0.35
SYNCRIP-201ENST00000355238 CDH18Q13634 790 aa12.86□□□□□ -0.35
SYNCRIP-201ENST00000355238 PNPT1Q8TCS8 783 aaKnown RBP12.86□□□□□ -0.35
SYNCRIP-201ENST00000355238 ACE2Q9BYF1 805 aaPredicted RBP12.86□□□□□ -0.35
SYNCRIP-201ENST00000355238 PIH1D1Q9NWS0 290 aaKnown RBP12.86□□□□□ -0.35
SYNCRIP-201ENST00000355238 SPATA31A3Q5VYP0 1347 aa12.86□□□□□ -0.35
SYNCRIP-201ENST00000355238 CDC42BPAQ5VT25 1732 aa12.86□□□□□ -0.35
SYNCRIP-201ENST00000355238 TCF4P15884 667 aa12.86□□□□□ -0.35
SYNCRIP-201ENST00000355238 ZNF7P17097 686 aaPredicted RBP12.86□□□□□ -0.35
SYNCRIP-201ENST00000355238 PRDX6P30041 224 aa12.86□□□□□ -0.35
SYNCRIP-201ENST00000355238 GPR15P49685 360 aa12.86□□□□□ -0.35
SYNCRIP-201ENST00000355238 GMFBP60983 142 aa12.86□□□□□ -0.35
SYNCRIP-201ENST00000355238 IL18R1Q13478 541 aa12.86□□□□□ -0.35
SYNCRIP-201ENST00000355238 PDIA6Q15084 440 aa12.86□□□□□ -0.35
SYNCRIP-201ENST00000355238 AMHR2Q16671 573 aa12.86□□□□□ -0.35
SYNCRIP-201ENST00000355238 PCID2Q5JVF3 399 aa12.86□□□□□ -0.35
SYNCRIP-201ENST00000355238 HERC6Q8IVU3 1022 aa12.86□□□□□ -0.35
SYNCRIP-201ENST00000355238 REPS1Q96D71 796 aa12.86□□□□□ -0.35
SYNCRIP-201ENST00000355238 CRAMP1Q96RY5 1269 aa12.86□□□□□ -0.35
SYNCRIP-201ENST00000355238 NELFEP18615 380 aaKnown RBP12.86□□□□□ -0.35
SYNCRIP-201ENST00000355238 TNFAIP8L3Q5GJ75 292 aa12.86□□□□□ -0.35
SYNCRIP-201ENST00000355238 GPSM1Q86YR5 675 aa12.86□□□□□ -0.35
SYNCRIP-201ENST00000355238 TLCD1Q96CP7 247 aa12.86□□□□□ -0.35
SYNCRIP-201ENST00000355238 VPS35Q96QK1 796 aa12.86□□□□□ -0.35
SYNCRIP-201ENST00000355238 SP140LQ9H930 580 aa12.86□□□□□ -0.35
SYNCRIP-201ENST00000355238 PCDH12Q9NPG4 1184 aa12.86□□□□□ -0.35
SYNCRIP-201ENST00000355238 DOLKQ9UPQ8 538 aa12.86□□□□□ -0.35
SYNCRIP-201ENST00000355238 A0A1W2PPM1 405 aa12.86□□□□□ -0.35
SYNCRIP-201ENST00000355238 G3V2T6 193 aa12.86□□□□□ -0.35
SYNCRIP-201ENST00000355238 GJB6O95452 261 aa12.86□□□□□ -0.35
SYNCRIP-201ENST00000355238 ECDO95905 644 aaPredicted RBP12.86□□□□□ -0.35
SYNCRIP-201ENST00000355238 C6orf52Q5T4I8 152 aa12.86□□□□□ -0.35
SYNCRIP-201ENST00000355238 THAP5Q7Z6K1 395 aa12.86□□□□□ -0.35
SYNCRIP-201ENST00000355238 PIGWQ7Z7B1 504 aa12.86□□□□□ -0.35
SYNCRIP-201ENST00000355238 SATL1Q86VE3 508 aa12.86□□□□□ -0.35
SYNCRIP-201ENST00000355238 EBNA1BP2Q99848 306 aaKnown RBP12.86□□□□□ -0.35
SYNCRIP-201ENST00000355238 NOL11Q9H8H0 719 aaKnown RBP12.86□□□□□ -0.35
SYNCRIP-201ENST00000355238 DNAJC28Q9NX36 388 aa12.86□□□□□ -0.35
SYNCRIP-201ENST00000355238 CORO2BQ9UQ03 480 aa12.86□□□□□ -0.35
SYNCRIP-201ENST00000355238 PLOD3O60568 738 aa12.85□□□□□ -0.35
SYNCRIP-201ENST00000355238 AVILO75366 819 aa12.85□□□□□ -0.35
SYNCRIP-201ENST00000355238 ZBTB11O95625 1053 aaPredicted RBP12.85□□□□□ -0.35
SYNCRIP-201ENST00000355238 ITGA2BP08514 1039 aa12.85□□□□□ -0.35
SYNCRIP-201ENST00000355238 DARSP14868 501 aaKnown RBP12.85□□□□□ -0.35
SYNCRIP-201ENST00000355238 POLR2EP19388 210 aaKnown RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms