RNA–Protein interactions for RNA: ENST00000354241.5

TRIM4-202, Transcript of tripartite motif containing 4, humanhuman

TSL 1 (best) BASIC

Gene TRIM4, Length 1,942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-202ENST00000354241 VN1R2Q8NFZ6 395 aa20.9■□□□□ 0.94
TRIM4-202ENST00000354241 FBF1Q8TES7 1133 aa20.9■□□□□ 0.94
TRIM4-202ENST00000354241 EBNA1BP2Q99848 306 aaKnown RBP20.9■□□□□ 0.94
TRIM4-202ENST00000354241 PDFQ9HBH1 243 aa20.9■□□□□ 0.94
TRIM4-202ENST00000354241 TDP1Q9NUW8 608 aa20.9■□□□□ 0.94
TRIM4-202ENST00000354241 NOVA2Q9UNW9 492 aaKnown RBP20.9■□□□□ 0.94
TRIM4-202ENST00000354241 E2F8A0AVK6 867 aa20.9■□□□□ 0.94
TRIM4-202ENST00000354241 KDELR3O43731 214 aa20.9■□□□□ 0.94
TRIM4-202ENST00000354241 GLDCP23378 1020 aa20.9■□□□□ 0.94
TRIM4-202ENST00000354241 GEMP55040 296 aa20.9■□□□□ 0.94
TRIM4-202ENST00000354241 CDH18Q13634 790 aa20.9■□□□□ 0.94
TRIM4-202ENST00000354241 PPP1R2P1Q96PQ5 205 aa20.9■□□□□ 0.94
TRIM4-202ENST00000354241 C2orf16Q68DN1 1984 aa20.9■□□□□ 0.94
TRIM4-202ENST00000354241 SDR42E2A6NKP2 422 aa20.89■□□□□ 0.93
TRIM4-202ENST00000354241 SOBPA7XYQ1 873 aa20.89■□□□□ 0.93
TRIM4-202ENST00000354241 POC1B-GALNT4F8VUJ3 575 aa20.89■□□□□ 0.93
TRIM4-202ENST00000354241 TCEA3O75764 348 aa20.89■□□□□ 0.93
TRIM4-202ENST00000354241 PRAMEF12O95522 483 aa20.89■□□□□ 0.93
TRIM4-202ENST00000354241 CRADDP78560 199 aa20.89■□□□□ 0.93
TRIM4-202ENST00000354241 ZNF235Q14590 738 aa20.89■□□□□ 0.93
TRIM4-202ENST00000354241 MPPE1Q53F39 396 aa20.89■□□□□ 0.93
TRIM4-202ENST00000354241 FSCBQ5H9T9 825 aa20.89■□□□□ 0.93
TRIM4-202ENST00000354241 NAPEPLDQ6IQ20 393 aa20.89■□□□□ 0.93
TRIM4-202ENST00000354241 IPMKQ8NFU5 416 aa20.89■□□□□ 0.93
TRIM4-202ENST00000354241 RIN3Q8TB24 985 aa20.89■□□□□ 0.93
TRIM4-202ENST00000354241 ITFG1Q8TB96 612 aa20.89■□□□□ 0.93
TRIM4-202ENST00000354241 ZSWIM3Q96MP5 696 aa20.89■□□□□ 0.93
TRIM4-202ENST00000354241 ZNF599Q96NL3 588 aa20.89■□□□□ 0.93
TRIM4-202ENST00000354241 SLC25A51Q9H1U9 297 aa20.89■□□□□ 0.93
TRIM4-202ENST00000354241 SFXN1Q9H9B4 322 aa20.89■□□□□ 0.93
TRIM4-202ENST00000354241 CASS4Q9NQ75 786 aa20.89■□□□□ 0.93
TRIM4-202ENST00000354241 CTNNAL1Q9UBT7 734 aa20.89■□□□□ 0.93
TRIM4-202ENST00000354241 RABGEF1Q9UJ41 708 aa20.89■□□□□ 0.93
TRIM4-202ENST00000354241 ACTL7AQ9Y615 435 aa20.89■□□□□ 0.93
TRIM4-202ENST00000354241 MIA3Q5JRA6 1907 aa20.89■□□□□ 0.93
TRIM4-202ENST00000354241 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.88■□□□□ 0.93
TRIM4-202ENST00000354241 CBX4O00257 560 aa20.88■□□□□ 0.93
TRIM4-202ENST00000354241 SPAG6O75602 509 aa20.88■□□□□ 0.93
TRIM4-202ENST00000354241 CBX2Q14781 532 aaPredicted RBP20.88■□□□□ 0.93
TRIM4-202ENST00000354241 MFN1Q8IWA4 741 aa20.88■□□□□ 0.93
TRIM4-202ENST00000354241 KLHDC8BQ8IXV7 354 aa20.88■□□□□ 0.93
TRIM4-202ENST00000354241 FAM76AQ8TAV0 307 aa20.88■□□□□ 0.93
TRIM4-202ENST00000354241 TIFAQ96CG3 184 aa20.88■□□□□ 0.93
TRIM4-202ENST00000354241 MRRFQ96E11 262 aaKnown RBP20.88■□□□□ 0.93
TRIM4-202ENST00000354241 STAMBPL1Q96FJ0 436 aa20.88■□□□□ 0.93
TRIM4-202ENST00000354241 PGM2Q96G03 612 aa20.88■□□□□ 0.93
TRIM4-202ENST00000354241 PKNOX2Q96KN3 472 aa20.88■□□□□ 0.93
TRIM4-202ENST00000354241 XPO6Q96QU8 1125 aaKnown RBP20.88■□□□□ 0.93
TRIM4-202ENST00000354241 SYBUQ9NX95 663 aa20.88■□□□□ 0.93
TRIM4-202ENST00000354241 PLK2Q9NYY3 685 aa20.88■□□□□ 0.93
TRIM4-202ENST00000354241 UBA2Q9UBT2 640 aaPredicted RBP20.88■□□□□ 0.93
TRIM4-202ENST00000354241 PMPCBO75439 489 aa20.88■□□□□ 0.93
TRIM4-202ENST00000354241 DSC2Q02487 901 aa20.88■□□□□ 0.93
TRIM4-202ENST00000354241 ZNF783Q6ZMS7 281 aa20.88■□□□□ 0.93
TRIM4-202ENST00000354241 LINC00523Q86TU6 105 aa20.88■□□□□ 0.93
TRIM4-202ENST00000354241 TDHQ8IZJ6 230 aa20.88■□□□□ 0.93
TRIM4-202ENST00000354241 TNS4Q8IZW8 715 aa20.88■□□□□ 0.93
TRIM4-202ENST00000354241 PGBD5Q8N414 524 aa20.88■□□□□ 0.93
TRIM4-202ENST00000354241 WFDC5Q8TCV5 224 aa20.88■□□□□ 0.93
TRIM4-202ENST00000354241 MRPL38Q96DV4 380 aaKnown RBP20.88■□□□□ 0.93
TRIM4-202ENST00000354241 CDCA3Q99618 268 aaPredicted RBP20.88■□□□□ 0.93
TRIM4-202ENST00000354241 TBL1YQ9BQ87 522 aa20.88■□□□□ 0.93
TRIM4-202ENST00000354241 TRIM56Q9BRZ2 755 aaKnown RBP20.88■□□□□ 0.93
TRIM4-202ENST00000354241 FICDQ9BVA6 458 aa20.88■□□□□ 0.93
TRIM4-202ENST00000354241 ACE2Q9BYF1 805 aaPredicted RBP20.88■□□□□ 0.93
TRIM4-202ENST00000354241 ZMYM5Q9UJ78 669 aa20.88■□□□□ 0.93
TRIM4-202ENST00000354241 MZF1P28698 734 aaPredicted RBP20.87■□□□□ 0.93
TRIM4-202ENST00000354241 TNK2Q07912 1038 aa20.87■□□□□ 0.93
TRIM4-202ENST00000354241 EFTUD2Q15029 972 aaKnown RBP eCLIP20.87■□□□□ 0.931e-5■■■□□ 16.7
TRIM4-202ENST00000354241 UNC5AQ6ZN44 842 aa20.87■□□□□ 0.93
TRIM4-202ENST00000354241 CCDC117Q8IWD4 279 aaPredicted RBP20.87■□□□□ 0.93
TRIM4-202ENST00000354241 BBS5Q8N3I7 341 aa20.87■□□□□ 0.93
TRIM4-202ENST00000354241 PPP2R3CQ969Q6 453 aa20.87■□□□□ 0.93
TRIM4-202ENST00000354241 IMP4Q96G21 291 aaKnown RBP20.87■□□□□ 0.93
TRIM4-202ENST00000354241 FSD1LQ9BXM9 530 aa20.87■□□□□ 0.93
TRIM4-202ENST00000354241 ACSS3Q9H6R3 686 aa20.87■□□□□ 0.93
TRIM4-202ENST00000354241 BFARQ9NZS9 450 aa20.87■□□□□ 0.93
TRIM4-202ENST00000354241 TBK1Q9UHD2 729 aa20.87■□□□□ 0.93
TRIM4-202ENST00000354241 RANBP2P49792 3224 aaKnown RBP20.87■□□□□ 0.93
TRIM4-202ENST00000354241 TCRBV9S1A1TA0A576 114 aa20.86■□□□□ 0.93
TRIM4-202ENST00000354241 TTC24A2A3L6 582 aaPredicted RBP20.86■□□□□ 0.93
TRIM4-202ENST00000354241 AGTP01019 485 aa20.86■□□□□ 0.93
TRIM4-202ENST00000354241 CYBBP04839 570 aa20.86■□□□□ 0.93
TRIM4-202ENST00000354241 CSKP41240 450 aa20.86■□□□□ 0.93
TRIM4-202ENST00000354241 CD86P42081 329 aa20.86■□□□□ 0.93
TRIM4-202ENST00000354241 MAGOHP61326 146 aaKnown RBP20.86■□□□□ 0.93
TRIM4-202ENST00000354241 NIPAL4Q0D2K0 466 aa20.86■□□□□ 0.93
TRIM4-202ENST00000354241 MPP3Q13368 585 aa20.86■□□□□ 0.93
TRIM4-202ENST00000354241 KCNC3Q14003 757 aa20.86■□□□□ 0.93
TRIM4-202ENST00000354241 PCSK7Q16549 785 aa20.86■□□□□ 0.93
TRIM4-202ENST00000354241 KLHL38Q2WGJ6 581 aa20.86■□□□□ 0.93
TRIM4-202ENST00000354241 RARS2Q5T160 578 aaKnown RBP20.86■□□□□ 0.93
TRIM4-202ENST00000354241 POTEHQ6S545 545 aa20.86■□□□□ 0.93
TRIM4-202ENST00000354241 ARID3BQ8IVW6 561 aaPredicted RBP20.86■□□□□ 0.93
TRIM4-202ENST00000354241 APOL5Q9BWW9 433 aa20.86■□□□□ 0.93
TRIM4-202ENST00000354241 VPS28Q9UK41 221 aa20.86■□□□□ 0.93
TRIM4-202ENST00000354241 MYO9BQ13459 2157 aa20.86■□□□□ 0.93
TRIM4-202ENST00000354241 NUP210Q8TEM1 1887 aaPredicted RBP20.86■□□□□ 0.93
TRIM4-202ENST00000354241 CDH16O75309 829 aa20.86■□□□□ 0.93
TRIM4-202ENST00000354241 PIAS1O75925 651 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms