RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 KDELR1P24390 212 aa13.44□□□□□ -0.26
IFT88-202ENST00000351808 ELK4P28324 431 aa13.44□□□□□ -0.26
IFT88-202ENST00000351808 CASP3P42574 277 aa13.44□□□□□ -0.26
IFT88-202ENST00000351808 CCR10P46092 362 aa13.44□□□□□ -0.26
IFT88-202ENST00000351808 PPP4CP60510 307 aa13.44□□□□□ -0.26
IFT88-202ENST00000351808 TREML2Q5T2D2 321 aa13.44□□□□□ -0.26
IFT88-202ENST00000351808 SLX4IPQ5VYV7 408 aa13.44□□□□□ -0.26
IFT88-202ENST00000351808 XAF1Q6GPH4 301 aa13.44□□□□□ -0.26
IFT88-202ENST00000351808 DNAJC24Q6P3W2 148 aa13.44□□□□□ -0.26
IFT88-202ENST00000351808 ZNF773Q6PK81 442 aa13.44□□□□□ -0.26
IFT88-202ENST00000351808 TMEM270Q6UE05 265 aa13.44□□□□□ -0.26
IFT88-202ENST00000351808 GK5Q6ZS86 529 aa13.44□□□□□ -0.26
IFT88-202ENST00000351808 PIGZQ86VD9 579 aa13.44□□□□□ -0.26
IFT88-202ENST00000351808 LDHDQ86WU2 507 aa13.44□□□□□ -0.26
IFT88-202ENST00000351808 LSMEM1Q8N8F7 131 aa13.44□□□□□ -0.26
IFT88-202ENST00000351808 SGCDQ92629 289 aa13.44□□□□□ -0.26
IFT88-202ENST00000351808 NRBF2Q96F24 287 aa13.44□□□□□ -0.26
IFT88-202ENST00000351808 FUNDC2Q9BWH2 189 aa13.44□□□□□ -0.26
IFT88-202ENST00000351808 SPEF1Q9Y4P9 236 aa13.44□□□□□ -0.26
IFT88-202ENST00000351808 HEATR9A2RTY3 570 aa13.43□□□□□ -0.26
IFT88-202ENST00000351808 XYLBO75191 536 aa13.43□□□□□ -0.26
IFT88-202ENST00000351808 NADKO95544 446 aaPredicted RBP13.43□□□□□ -0.26
IFT88-202ENST00000351808 PPP2R2BQ00005 443 aa13.43□□□□□ -0.26
IFT88-202ENST00000351808 ROR1Q01973 937 aa13.43□□□□□ -0.26
IFT88-202ENST00000351808 FSTL1Q12841 308 aa13.43□□□□□ -0.26
IFT88-202ENST00000351808 HERC3Q15034 1050 aa13.43□□□□□ -0.26
IFT88-202ENST00000351808 PUS10Q3MIT2 529 aaKnown RBP13.43□□□□□ -0.26
IFT88-202ENST00000351808 BRDTQ58F21 947 aaPredicted RBP13.43□□□□□ -0.26
IFT88-202ENST00000351808 LRRC8EQ6NSJ5 796 aa13.43□□□□□ -0.26
IFT88-202ENST00000351808 DHRSXQ8N5I4 330 aa13.43□□□□□ -0.26
IFT88-202ENST00000351808 XPNPEP3Q9NQH7 507 aa13.43□□□□□ -0.26
IFT88-202ENST00000351808 CYP26B1Q9NR63 512 aa13.43□□□□□ -0.26
IFT88-202ENST00000351808 WDR70Q9NW82 654 aa13.43□□□□□ -0.26
IFT88-202ENST00000351808 BOLA1Q9Y3E2 137 aa13.43□□□□□ -0.26
IFT88-202ENST00000351808 PCDHB4Q9Y5E5 795 aa13.43□□□□□ -0.26
IFT88-202ENST00000351808 CDK5RAP2Q96SN8 1893 aa13.43□□□□□ -0.26
IFT88-202ENST00000351808 DDX60LQ5H9U9 1706 aaKnown RBP13.43□□□□□ -0.26
IFT88-202ENST00000351808 SYCE1LA8MT33 242 aa13.43□□□□□ -0.26
IFT88-202ENST00000351808 ARHGAP33O14559 1287 aa13.43□□□□□ -0.26
IFT88-202ENST00000351808 KCNK2O95069 426 aa13.43□□□□□ -0.26
IFT88-202ENST00000351808 PROZP22891 400 aa13.43□□□□□ -0.26
IFT88-202ENST00000351808 SREBF1P36956 1147 aa13.43□□□□□ -0.26
IFT88-202ENST00000351808 POLD3Q15054 466 aaPredicted RBP13.43□□□□□ -0.26
IFT88-202ENST00000351808 TWF2Q6IBS0 349 aaKnown RBP13.43□□□□□ -0.26
IFT88-202ENST00000351808 PADI6Q6TGC4 694 aa13.43□□□□□ -0.26
IFT88-202ENST00000351808 GADL1Q6ZQY3 521 aa13.43□□□□□ -0.26
IFT88-202ENST00000351808 ENOSF1Q7L5Y1 443 aa13.43□□□□□ -0.26
IFT88-202ENST00000351808 LRRN4Q8WUT4 740 aa13.43□□□□□ -0.26
IFT88-202ENST00000351808 MAGED4Q96JG8 741 aa13.43□□□□□ -0.26
IFT88-202ENST00000351808 OR2B2Q9GZK3 357 aa13.43□□□□□ -0.26
IFT88-202ENST00000351808 EPS8L2Q9H6S3 715 aa13.43□□□□□ -0.26
IFT88-202ENST00000351808 SLC16A4O15374 487 aa13.42□□□□□ -0.26
IFT88-202ENST00000351808 CCNKO75909 580 aa13.42□□□□□ -0.26
IFT88-202ENST00000351808 DLGAP3O95886 979 aa13.42□□□□□ -0.26
IFT88-202ENST00000351808 KRT8P05787 483 aa13.42□□□□□ -0.26
IFT88-202ENST00000351808 JUNBP17275 347 aaPredicted RBP13.42□□□□□ -0.26
IFT88-202ENST00000351808 ITIH1P19827 911 aa13.42□□□□□ -0.26
IFT88-202ENST00000351808 MAGP20916 626 aa13.42□□□□□ -0.26
IFT88-202ENST00000351808 GARTP22102 1010 aa13.42□□□□□ -0.26
IFT88-202ENST00000351808 MMP8P22894 467 aa13.42□□□□□ -0.26
IFT88-202ENST00000351808 SLC26A2P50443 739 aa13.42□□□□□ -0.26
IFT88-202ENST00000351808 GALK2Q01415 458 aa13.42□□□□□ -0.26
IFT88-202ENST00000351808 VAC14Q08AM6 782 aa13.42□□□□□ -0.26
IFT88-202ENST00000351808 CCNYL2Q5T2Q4 361 aa13.42□□□□□ -0.26
IFT88-202ENST00000351808 INTS11Q5TA45 600 aaKnown RBP13.42□□□□□ -0.26
IFT88-202ENST00000351808 CYP4A22Q5TCH4 519 aa13.42□□□□□ -0.26
IFT88-202ENST00000351808 TRMT1LQ7Z2T5 733 aaKnown RBP13.42□□□□□ -0.26
IFT88-202ENST00000351808 LGI2Q8N0V4 545 aa13.42□□□□□ -0.26
IFT88-202ENST00000351808 SCML4Q8N228 414 aa13.42□□□□□ -0.26
IFT88-202ENST00000351808 PACRGLQ8N7B6 248 aa13.42□□□□□ -0.26
IFT88-202ENST00000351808 CNTD1Q8N815 330 aa13.42□□□□□ -0.26
IFT88-202ENST00000351808 TTLL6Q8N841 843 aa13.42□□□□□ -0.26
IFT88-202ENST00000351808 ZNF280CQ8ND82 737 aa13.42□□□□□ -0.26
IFT88-202ENST00000351808 PSMA8Q8TAA3 256 aa13.42□□□□□ -0.26
IFT88-202ENST00000351808 ACMSDQ8TDX5 336 aa13.42□□□□□ -0.26
IFT88-202ENST00000351808 FKBP10Q96AY3 582 aa13.42□□□□□ -0.26
IFT88-202ENST00000351808 FRMD8P1Q9BZ68 369 aaPredicted RBP13.42□□□□□ -0.26
IFT88-202ENST00000351808 CPNE5Q9HCH3 593 aa13.42□□□□□ -0.26
IFT88-202ENST00000351808 TRIM39Q9HCM9 518 aa13.42□□□□□ -0.26
IFT88-202ENST00000351808 ABCB10Q9NRK6 738 aa13.42□□□□□ -0.26
IFT88-202ENST00000351808 GIMAP4Q9NUV9 329 aa13.42□□□□□ -0.26
IFT88-202ENST00000351808 SLCO3A1Q9UIG8 710 aa13.42□□□□□ -0.26
IFT88-202ENST00000351808 OAZ3Q9UMX2 235 aa13.42□□□□□ -0.26
IFT88-202ENST00000351808 COL18A1P39060 1754 aa13.42□□□□□ -0.26
IFT88-202ENST00000351808 ZNF335Q9H4Z2 1342 aaPredicted RBP13.42□□□□□ -0.26
IFT88-202ENST00000351808 TBKBP1A7MCY6 615 aa13.42□□□□□ -0.26
IFT88-202ENST00000351808 APOC4-APOC2K7ER74 178 aa13.42□□□□□ -0.26
IFT88-202ENST00000351808 APOC2P02655 101 aa13.42□□□□□ -0.26
IFT88-202ENST00000351808 JUNP05412 331 aaKnown RBP13.42□□□□□ -0.26
IFT88-202ENST00000351808 HDCP19113 662 aa13.42□□□□□ -0.26
IFT88-202ENST00000351808 ATP5OP48047 213 aa13.42□□□□□ -0.26
IFT88-202ENST00000351808 MMRN1Q13201 1228 aa13.42□□□□□ -0.26
IFT88-202ENST00000351808 TUBA3CQ13748 450 aa13.42□□□□□ -0.26
IFT88-202ENST00000351808 PIGHQ14442 188 aaPredicted RBP13.42□□□□□ -0.26
IFT88-202ENST00000351808 PITRM1Q5JRX3 1037 aa13.42□□□□□ -0.26
IFT88-202ENST00000351808 TBCELQ5QJ74 424 aa13.42□□□□□ -0.26
IFT88-202ENST00000351808 WDR78Q5VTH9 848 aa13.42□□□□□ -0.26
IFT88-202ENST00000351808 SEL1L3Q68CR1 1132 aa13.42□□□□□ -0.26
IFT88-202ENST00000351808 ZCCHC8Q6NZY4 707 aaKnown RBP13.42□□□□□ -0.26
IFT88-202ENST00000351808 NEK5Q6P3R8 708 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms