RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 KDM4CQ9H3R0 1056 aa7.04□□□□□ -1.28
TRIM55-203ENST00000350034 PDFQ9HBH1 243 aa7.04□□□□□ -1.28
TRIM55-203ENST00000350034 RXFP1Q9HBX9 757 aa7.04□□□□□ -1.28
TRIM55-203ENST00000350034 ENTPD7Q9NQZ7 604 aa7.04□□□□□ -1.28
TRIM55-203ENST00000350034 VPS45Q9NRW7 570 aa7.04□□□□□ -1.28
TRIM55-203ENST00000350034 SPG21Q9NZD8 308 aa7.04□□□□□ -1.28
TRIM55-203ENST00000350034 STOML2Q9UJZ1 356 aa7.04□□□□□ -1.28
TRIM55-203ENST00000350034 ARL2BPQ9Y2Y0 163 aa7.04□□□□□ -1.28
TRIM55-203ENST00000350034 YIPF1Q9Y548 306 aa7.04□□□□□ -1.28
TRIM55-203ENST00000350034 PSAT1Q9Y617 370 aa7.04□□□□□ -1.28
TRIM55-203ENST00000350034 MICAL3Q7RTP6 2002 aa7.04□□□□□ -1.28
TRIM55-203ENST00000350034 LTBP2Q14767 1821 aa7.04□□□□□ -1.28
TRIM55-203ENST00000350034 J3KR12 359 aa7.03□□□□□ -1.28
TRIM55-203ENST00000350034 MYO1CO00159 1063 aa7.03□□□□□ -1.28
TRIM55-203ENST00000350034 GFRA2O00451 464 aa7.03□□□□□ -1.28
TRIM55-203ENST00000350034 COPEO14579 308 aa7.03□□□□□ -1.28
TRIM55-203ENST00000350034 ATP9BO43861 1147 aa7.03□□□□□ -1.28
TRIM55-203ENST00000350034 PRAMEF11O60813 436 aa7.03□□□□□ -1.28
TRIM55-203ENST00000350034 RAMP2O60895 175 aa7.03□□□□□ -1.28
TRIM55-203ENST00000350034 STC2O76061 302 aa7.03□□□□□ -1.28
TRIM55-203ENST00000350034 FSBPO95073 299 aa7.03□□□□□ -1.28
TRIM55-203ENST00000350034 GJB5O95377 273 aa7.03□□□□□ -1.28
TRIM55-203ENST00000350034 OLFM2O95897 454 aa7.03□□□□□ -1.28
TRIM55-203ENST00000350034 MT-CYBP00156 380 aaPredicted RBP7.03□□□□□ -1.28
TRIM55-203ENST00000350034 GSRP00390 522 aa7.03□□□□□ -1.28
TRIM55-203ENST00000350034 F11P03951 625 aa7.03□□□□□ -1.28
TRIM55-203ENST00000350034 KLKB1P03952 638 aa7.03□□□□□ -1.28
TRIM55-203ENST00000350034 ALDOAP04075 364 aaKnown RBP7.03□□□□□ -1.28
TRIM55-203ENST00000350034 MMP2P08253 660 aa7.03□□□□□ -1.28
TRIM55-203ENST00000350034 HMBSP08397 361 aa7.03□□□□□ -1.28
TRIM55-203ENST00000350034 ITGA2BP08514 1039 aa7.03□□□□□ -1.28
TRIM55-203ENST00000350034 ERVK-10P10266 1014 aa7.03□□□□□ -1.28
TRIM55-203ENST00000350034 CSF2RAP15509 400 aa7.03□□□□□ -1.28
TRIM55-203ENST00000350034 TPH1P17752 444 aa7.03□□□□□ -1.28
TRIM55-203ENST00000350034 ARNTP27540 789 aa7.03□□□□□ -1.28
TRIM55-203ENST00000350034 NMBRP28336 390 aa7.03□□□□□ -1.28
TRIM55-203ENST00000350034 HOXD9P28356 352 aaPredicted RBP7.03□□□□□ -1.28
TRIM55-203ENST00000350034 SLC6A4P31645 630 aa7.03□□□□□ -1.28
TRIM55-203ENST00000350034 SERPINB4P48594 390 aa7.03□□□□□ -1.28
TRIM55-203ENST00000350034 LIMK2P53671 638 aa7.03□□□□□ -1.28
TRIM55-203ENST00000350034 CSE1LP55060 971 aaKnown RBP7.03□□□□□ -1.28
TRIM55-203ENST00000350034 WNT3AP56704 352 aa7.03□□□□□ -1.28
TRIM55-203ENST00000350034 SLC10A7Q0GE19 358 aa7.03□□□□□ -1.28
TRIM55-203ENST00000350034 BTG3Q14201 252 aaPredicted RBP7.03□□□□□ -1.28
TRIM55-203ENST00000350034 IHHQ14623 411 aa7.03□□□□□ -1.28
TRIM55-203ENST00000350034 SLC14A2Q15849 920 aa7.03□□□□□ -1.28
TRIM55-203ENST00000350034 INSCQ1MX18 579 aa7.03□□□□□ -1.28
TRIM55-203ENST00000350034 SPRED3Q2MJR0 410 aa7.03□□□□□ -1.28
TRIM55-203ENST00000350034 GALNTL6Q49A17 601 aa7.03□□□□□ -1.28
TRIM55-203ENST00000350034 MROH9Q5TGP6 573 aa7.03□□□□□ -1.28
TRIM55-203ENST00000350034 MARC1Q5VT66 337 aa7.03□□□□□ -1.28
TRIM55-203ENST00000350034 ALG1LQ6GMV1 187 aa7.03□□□□□ -1.28
TRIM55-203ENST00000350034 CES3Q6UWW8 571 aa7.03□□□□□ -1.28
TRIM55-203ENST00000350034 OTOAQ7RTW8 1153 aa7.03□□□□□ -1.28
TRIM55-203ENST00000350034 TFAP2DQ7Z6R9 452 aa7.03□□□□□ -1.28
TRIM55-203ENST00000350034 TMEM150AQ86TG1 271 aa7.03□□□□□ -1.28
TRIM55-203ENST00000350034 RASSF3Q86WH2 238 aa7.03□□□□□ -1.28
TRIM55-203ENST00000350034 CNTN4Q8IWV2 1026 aa7.03□□□□□ -1.28
TRIM55-203ENST00000350034 LGI2Q8N0V4 545 aa7.03□□□□□ -1.28
TRIM55-203ENST00000350034 PGBD5Q8N414 524 aa7.03□□□□□ -1.28
TRIM55-203ENST00000350034 OTUD6BQ8N6M0 293 aa7.03□□□□□ -1.28
TRIM55-203ENST00000350034 DNAAF3Q8N9W5 541 aa7.03□□□□□ -1.28
TRIM55-203ENST00000350034 LRRC8CQ8TDW0 803 aa7.03□□□□□ -1.28
TRIM55-203ENST00000350034 SPOCK2Q92563 424 aa7.03□□□□□ -1.28
TRIM55-203ENST00000350034 PTPRN2Q92932 1015 aa7.03□□□□□ -1.28
TRIM55-203ENST00000350034 MFSD3Q96ES6 412 aa7.03□□□□□ -1.28
TRIM55-203ENST00000350034 TMEM169Q96HH4 297 aa7.03□□□□□ -1.28
TRIM55-203ENST00000350034 PAWRQ96IZ0 340 aaKnown RBP7.03□□□□□ -1.28
TRIM55-203ENST00000350034 ZNF512Q96ME7 567 aaPredicted RBP7.03□□□□□ -1.28
TRIM55-203ENST00000350034 ZNF599Q96NL3 588 aa7.03□□□□□ -1.28
TRIM55-203ENST00000350034 RPRD1AQ96P16 312 aaPredicted RBP7.03□□□□□ -1.28
TRIM55-203ENST00000350034 FAM111AQ96PZ2 611 aa7.03□□□□□ -1.28
TRIM55-203ENST00000350034 RANBP9Q96S59 729 aa7.03□□□□□ -1.28
TRIM55-203ENST00000350034 RBBP8Q99708 897 aa7.03□□□□□ -1.28
TRIM55-203ENST00000350034 PAIP2Q9BPZ3 127 aaKnown RBP7.03□□□□□ -1.28
TRIM55-203ENST00000350034 APOL2Q9BQE5 337 aa7.03□□□□□ -1.28
TRIM55-203ENST00000350034 PLCD4Q9BRC7 762 aa7.03□□□□□ -1.28
TRIM55-203ENST00000350034 FICDQ9BVA6 458 aa7.03□□□□□ -1.28
TRIM55-203ENST00000350034 PITPNM3Q9BZ71 974 aa7.03□□□□□ -1.28
TRIM55-203ENST00000350034 IL21Q9HBE4 155 aa7.03□□□□□ -1.28
TRIM55-203ENST00000350034 SLCO1B3Q9NPD5 702 aa7.03□□□□□ -1.28
TRIM55-203ENST00000350034 CHRAC1Q9NRG0 131 aa7.03□□□□□ -1.28
TRIM55-203ENST00000350034 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.03□□□□□ -1.28
TRIM55-203ENST00000350034 TREX1Q9NSU2 369 aa7.03□□□□□ -1.28
TRIM55-203ENST00000350034 UBP1Q9NZI7 540 aa7.03□□□□□ -1.28
TRIM55-203ENST00000350034 TRPM5Q9NZQ8 1165 aa7.03□□□□□ -1.28
TRIM55-203ENST00000350034 SIRPGQ9P1W8 387 aa7.03□□□□□ -1.28
TRIM55-203ENST00000350034 SLC17A6Q9P2U8 582 aa7.03□□□□□ -1.28
TRIM55-203ENST00000350034 PHTF1Q9UMS5 762 aa7.03□□□□□ -1.28
TRIM55-203ENST00000350034 MAGED2Q9UNF1 606 aaPredicted RBP7.03□□□□□ -1.28
TRIM55-203ENST00000350034 EYSQ5T1H1 3165 aa7.03□□□□□ -1.28
TRIM55-203ENST00000350034 MYO16Q9Y6X6 1858 aa7.02□□□□□ -1.28
TRIM55-203ENST00000350034 ZNF638Q14966 1978 aaKnown RBP7.02□□□□□ -1.29
TRIM55-203ENST00000350034 GREB1Q4ZG55 1949 aa7.02□□□□□ -1.29
TRIM55-203ENST00000350034 LOC285095A0A1B0GVY8 99 aa7.02□□□□□ -1.29
TRIM55-203ENST00000350034 ANKRD65E5RJM6 399 aa7.02□□□□□ -1.29
TRIM55-203ENST00000350034 F5H5T6 163 aa7.02□□□□□ -1.29
TRIM55-203ENST00000350034 SOX1O00570 391 aaPredicted RBP7.02□□□□□ -1.29
TRIM55-203ENST00000350034 C2CD2LO14523 706 aa7.02□□□□□ -1.29
TRIM55-203ENST00000350034 BIRC5O15392 142 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms