RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 SORT1Q99523 831 aa10.82□□□□□ -0.68
CAPN3-203ENST00000349748 ACO2Q99798 780 aaKnown RBP10.82□□□□□ -0.68
CAPN3-203ENST00000349748 TTYH2Q9BSA4 534 aa10.82□□□□□ -0.68
CAPN3-203ENST00000349748 GPN2Q9H9Y4 310 aaPredicted RBP10.82□□□□□ -0.68
CAPN3-203ENST00000349748 PAQR5Q9NXK6 330 aaPredicted RBP10.82□□□□□ -0.68
CAPN3-203ENST00000349748 ADA2Q9NZK5 511 aa10.82□□□□□ -0.68
CAPN3-203ENST00000349748 IPO11Q9UI26 975 aaKnown RBP10.82□□□□□ -0.68
CAPN3-203ENST00000349748 GGA1Q9UJY5 639 aa10.82□□□□□ -0.68
CAPN3-203ENST00000349748 ZNF221Q9UK13 617 aa10.82□□□□□ -0.68
CAPN3-203ENST00000349748 G3V3G9 751 aa10.81□□□□□ -0.68
CAPN3-203ENST00000349748 SYNCRIPO60506 623 aaKnown RBP10.81□□□□□ -0.68
CAPN3-203ENST00000349748 SNX2O60749 519 aa10.81□□□□□ -0.68
CAPN3-203ENST00000349748 GSRP00390 522 aa10.81□□□□□ -0.68
CAPN3-203ENST00000349748 SNRPAP09012 282 aaKnown RBP10.81□□□□□ -0.68
CAPN3-203ENST00000349748 FGF3P11487 239 aaPredicted RBP10.81□□□□□ -0.68
CAPN3-203ENST00000349748 IFI30P13284 250 aa10.81□□□□□ -0.68
CAPN3-203ENST00000349748 DPEP1P16444 411 aa10.81□□□□□ -0.68
CAPN3-203ENST00000349748 CFL1P23528 166 aaKnown RBP10.81□□□□□ -0.68
CAPN3-203ENST00000349748 ALDH7A1P49419 539 aaKnown RBP10.81□□□□□ -0.68
CAPN3-203ENST00000349748 FCHO2Q0JRZ9 810 aa10.81□□□□□ -0.68
CAPN3-203ENST00000349748 MERTKQ12866 999 aa10.81□□□□□ -0.68
CAPN3-203ENST00000349748 BFSP1Q12934 665 aa10.81□□□□□ -0.68
CAPN3-203ENST00000349748 NFX1Q12986 1120 aaKnown RBP10.81□□□□□ -0.68
CAPN3-203ENST00000349748 DCAF8Q5TAQ9 597 aa10.81□□□□□ -0.68
CAPN3-203ENST00000349748 RINT1Q6NUQ1 792 aa10.81□□□□□ -0.68
CAPN3-203ENST00000349748 CRTC3Q6UUV7 619 aa10.81□□□□□ -0.68
CAPN3-203ENST00000349748 KCTD20Q7Z5Y7 419 aa10.81□□□□□ -0.68
CAPN3-203ENST00000349748 ADGRF2Q8IZF7 708 aa10.81□□□□□ -0.68
CAPN3-203ENST00000349748 SLC16A10Q8TF71 515 aa10.81□□□□□ -0.68
CAPN3-203ENST00000349748 DACT3Q96B18 629 aaPredicted RBP10.81□□□□□ -0.68
CAPN3-203ENST00000349748 COA7Q96BR5 231 aa10.81□□□□□ -0.68
CAPN3-203ENST00000349748 ZSCAN5AQ9BUG6 496 aa10.81□□□□□ -0.68
CAPN3-203ENST00000349748 CPNE5Q9HCH3 593 aa10.81□□□□□ -0.68
CAPN3-203ENST00000349748 SYTL2Q9HCH5 934 aa10.81□□□□□ -0.68
CAPN3-203ENST00000349748 C8orf4Q9NR00 106 aa10.81□□□□□ -0.68
CAPN3-203ENST00000349748 PKD2L1Q9P0L9 805 aa10.81□□□□□ -0.68
CAPN3-203ENST00000349748 POLLQ9UGP5 575 aa10.81□□□□□ -0.68
CAPN3-203ENST00000349748 ATPIF1Q9UII2 106 aa10.81□□□□□ -0.68
CAPN3-203ENST00000349748 DNMT3LQ9UJW3 386 aa10.81□□□□□ -0.68
CAPN3-203ENST00000349748 CNOT6Q9ULM6 557 aaKnown RBP10.81□□□□□ -0.68
CAPN3-203ENST00000349748 CFL2Q9Y281 166 aa10.81□□□□□ -0.68
CAPN3-203ENST00000349748 TNRC6CQ9HCJ0 1690 aaKnown RBP10.81□□□□□ -0.68
CAPN3-203ENST00000349748 ZBTB39O15060 712 aa10.81□□□□□ -0.68
CAPN3-203ENST00000349748 DEAF1O75398 565 aaPredicted RBP10.81□□□□□ -0.68
CAPN3-203ENST00000349748 SEC14L2O76054 403 aa10.81□□□□□ -0.68
CAPN3-203ENST00000349748 PRLP01236 227 aa10.81□□□□□ -0.68
CAPN3-203ENST00000349748 CD4P01730 458 aa10.81□□□□□ -0.68
CAPN3-203ENST00000349748 ALDH4A1P30038 563 aa10.81□□□□□ -0.68
CAPN3-203ENST00000349748 PKLRP30613 574 aa10.81□□□□□ -0.68
CAPN3-203ENST00000349748 TAGLNQ01995 201 aaKnown RBP10.81□□□□□ -0.68
CAPN3-203ENST00000349748 DOK7Q18PE1 504 aa10.81□□□□□ -0.68
CAPN3-203ENST00000349748 Q5BKY6 102 aa10.81□□□□□ -0.68
CAPN3-203ENST00000349748 IGSF11Q5DX21 431 aa10.81□□□□□ -0.68
CAPN3-203ENST00000349748 CATSPEREQ5SY80 951 aa10.81□□□□□ -0.68
CAPN3-203ENST00000349748 C12orf60Q5U649 245 aa10.81□□□□□ -0.68
CAPN3-203ENST00000349748 DPP8Q6V1X1 898 aaPredicted RBP10.81□□□□□ -0.68
CAPN3-203ENST00000349748 MAMSTRQ6ZN01 415 aa10.81□□□□□ -0.68
CAPN3-203ENST00000349748 SLC26A11Q86WA9 606 aa10.81□□□□□ -0.68
CAPN3-203ENST00000349748 PDIK1LQ8N165 341 aa10.81□□□□□ -0.68
CAPN3-203ENST00000349748 POC5Q8NA72 575 aa10.81□□□□□ -0.68
CAPN3-203ENST00000349748 MAPK15Q8TD08 544 aa10.81□□□□□ -0.68
CAPN3-203ENST00000349748 SDCCAG3Q96C92 435 aa10.81□□□□□ -0.68
CAPN3-203ENST00000349748 EFHD1Q9BUP0 239 aa10.81□□□□□ -0.68
CAPN3-203ENST00000349748 C2orf40Q9H1Z8 148 aa10.81□□□□□ -0.68
CAPN3-203ENST00000349748 COG4Q9H9E3 785 aa10.81□□□□□ -0.68
CAPN3-203ENST00000349748 COMMD8Q9NX08 183 aa10.81□□□□□ -0.68
CAPN3-203ENST00000349748 TOR4AQ9NXH8 423 aa10.81□□□□□ -0.68
CAPN3-203ENST00000349748 XPO7Q9UIA9 1087 aaKnown RBP10.81□□□□□ -0.68
CAPN3-203ENST00000349748 ROBO3Q96MS0 1386 aa10.81□□□□□ -0.68
CAPN3-203ENST00000349748 NEMP1O14524 444 aa10.8□□□□□ -0.68
CAPN3-203ENST00000349748 DAB1O75553 588 aa10.8□□□□□ -0.68
CAPN3-203ENST00000349748 KRT37O76014 449 aa10.8□□□□□ -0.68
CAPN3-203ENST00000349748 TOMM70O94826 608 aa10.8□□□□□ -0.68
CAPN3-203ENST00000349748 VAPBO95292 243 aa10.8□□□□□ -0.68
CAPN3-203ENST00000349748 P4HBP07237 508 aaKnown RBP10.8□□□□□ -0.68
CAPN3-203ENST00000349748 CD40LGP29965 261 aa10.8□□□□□ -0.68
CAPN3-203ENST00000349748 RRM2P31350 389 aa10.8□□□□□ -0.68
CAPN3-203ENST00000349748 GCLMP48507 274 aa10.8□□□□□ -0.68
CAPN3-203ENST00000349748 PLA2G16P53816 162 aa10.8□□□□□ -0.68
CAPN3-203ENST00000349748 NME5P56597 212 aa10.8□□□□□ -0.68
CAPN3-203ENST00000349748 MMRN1Q13201 1228 aa10.8□□□□□ -0.68
CAPN3-203ENST00000349748 USP17L6PQ6QN14 398 aa10.8□□□□□ -0.68
CAPN3-203ENST00000349748 USP17L2Q6R6M4 530 aa10.8□□□□□ -0.68
CAPN3-203ENST00000349748 MFSD7Q6UXD7 560 aa10.8□□□□□ -0.68
CAPN3-203ENST00000349748 PPIL6Q8IXY8 311 aa10.8□□□□□ -0.68
CAPN3-203ENST00000349748 THNSL1Q8IYQ7 743 aa10.8□□□□□ -0.68
CAPN3-203ENST00000349748 NAT8LQ8N9F0 302 aa10.8□□□□□ -0.68
CAPN3-203ENST00000349748 RASSF5Q8WWW0 418 aa10.8□□□□□ -0.68
CAPN3-203ENST00000349748 CPA5Q8WXQ8 436 aa10.8□□□□□ -0.68
CAPN3-203ENST00000349748 HEXIM2Q96MH2 286 aaKnown RBP10.8□□□□□ -0.68
CAPN3-203ENST00000349748 RMDN3Q96TC7 470 aa10.8□□□□□ -0.68
CAPN3-203ENST00000349748 TMEM47Q9BQJ4 181 aa10.8□□□□□ -0.68
CAPN3-203ENST00000349748 ACAT2Q9BWD1 397 aa10.8□□□□□ -0.68
CAPN3-203ENST00000349748 RNPEPQ9H4A4 650 aa10.8□□□□□ -0.68
CAPN3-203ENST00000349748 TBC1D22BQ9NU19 505 aa10.8□□□□□ -0.68
CAPN3-203ENST00000349748 SUCOQ9UBS9 1254 aaKnown RBP10.8□□□□□ -0.68
CAPN3-203ENST00000349748 RGPD3A6NKT7 1758 aaPredicted RBP10.8□□□□□ -0.68
CAPN3-203ENST00000349748 RGPD4Q7Z3J3 1758 aa10.8□□□□□ -0.68
CAPN3-203ENST00000349748 EPN2O95208 641 aa10.8□□□□□ -0.68
CAPN3-203ENST00000349748 CBLP22681 906 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms