RNA–Protein interactions for RNA: ENST00000348513.10

SMARCE1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCE1, Length 5,840 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-202ENST00000348513 RCVRNP35243 200 aa11.24□□□□□ -0.61
SMARCE1-202ENST00000348513 CDH8P55286 799 aa11.24□□□□□ -0.61
SMARCE1-202ENST00000348513 ADIGQ0VDE8 80 aa11.24□□□□□ -0.61
SMARCE1-202ENST00000348513 MAPK7Q13164 816 aa11.24□□□□□ -0.61
SMARCE1-202ENST00000348513 SPOCD1Q6ZMY3 1216 aa11.24□□□□□ -0.61
SMARCE1-202ENST00000348513 DGLUCYQ7Z3D6 616 aa11.24□□□□□ -0.61
SMARCE1-202ENST00000348513 PCYOX1LQ8NBM8 494 aa11.24□□□□□ -0.61
SMARCE1-202ENST00000348513 BTN2A2Q8WVV5 523 aa11.24□□□□□ -0.61
SMARCE1-202ENST00000348513 FOXP3Q9BZS1 431 aa11.24□□□□□ -0.61
SMARCE1-202ENST00000348513 PDGFDQ9GZP0 370 aaPredicted RBP11.24□□□□□ -0.61
SMARCE1-202ENST00000348513 TPK1Q9H3S4 243 aa11.24□□□□□ -0.61
SMARCE1-202ENST00000348513 TRMT13Q9NUP7 481 aaKnown RBP11.24□□□□□ -0.61
SMARCE1-202ENST00000348513 SOAT2O75908 522 aa11.23□□□□□ -0.61
SMARCE1-202ENST00000348513 ITGB6P18564 788 aa11.23□□□□□ -0.61
SMARCE1-202ENST00000348513 RPL10AP62906 217 aaKnown RBP11.23□□□□□ -0.61
SMARCE1-202ENST00000348513 MYBPC1Q00872 1141 aa11.23□□□□□ -0.61
SMARCE1-202ENST00000348513 FAM171A1Q5VUB5 890 aa11.23□□□□□ -0.61
SMARCE1-202ENST00000348513 ARID3BQ8IVW6 561 aaPredicted RBP11.23□□□□□ -0.61
SMARCE1-202ENST00000348513 KIAA0895Q8NCT3 520 aa11.23□□□□□ -0.61
SMARCE1-202ENST00000348513 REPS2Q8NFH8 660 aa11.23□□□□□ -0.61
SMARCE1-202ENST00000348513 PURBQ96QR8 312 aaKnown RBP11.23□□□□□ -0.61
SMARCE1-202ENST00000348513 TMEM39AQ9NV64 488 aa11.23□□□□□ -0.61
SMARCE1-202ENST00000348513 A0A1B0GVG6 124 aa11.23□□□□□ -0.61
SMARCE1-202ENST00000348513 EML1O00423 815 aa11.23□□□□□ -0.61
SMARCE1-202ENST00000348513 HOXA2O43364 376 aa11.23□□□□□ -0.61
SMARCE1-202ENST00000348513 SLITRK3O94933 977 aa11.23□□□□□ -0.61
SMARCE1-202ENST00000348513 HSF2Q03933 536 aa11.23□□□□□ -0.61
SMARCE1-202ENST00000348513 BST2Q10589 180 aaKnown RBP11.23□□□□□ -0.61
SMARCE1-202ENST00000348513 OVOS1Q6IE37 1185 aa11.23□□□□□ -0.61
SMARCE1-202ENST00000348513 APOBEC3HQ6NTF7 200 aaKnown RBP11.23□□□□□ -0.61
SMARCE1-202ENST00000348513 ABRAXAS1Q6UWZ7 409 aa11.23□□□□□ -0.61
SMARCE1-202ENST00000348513 FAM83AQ86UY5 434 aa11.23□□□□□ -0.61
SMARCE1-202ENST00000348513 OOSP2Q86WS3 158 aa11.23□□□□□ -0.61
SMARCE1-202ENST00000348513 SLC44A2Q8IWA5 706 aaPredicted RBP11.23□□□□□ -0.61
SMARCE1-202ENST00000348513 GALNT12Q8IXK2 581 aa11.23□□□□□ -0.61
SMARCE1-202ENST00000348513 MREGQ8N565 214 aa11.23□□□□□ -0.61
SMARCE1-202ENST00000348513 PGM2Q96G03 612 aa11.23□□□□□ -0.61
SMARCE1-202ENST00000348513 HES6Q96HZ4 224 aa11.23□□□□□ -0.61
SMARCE1-202ENST00000348513 SYT15Q9BQS2 421 aa11.23□□□□□ -0.61
SMARCE1-202ENST00000348513 OXCT2Q9BYC2 517 aaPredicted RBP11.23□□□□□ -0.61
SMARCE1-202ENST00000348513 IGFLR1Q9H665 355 aa11.23□□□□□ -0.61
SMARCE1-202ENST00000348513 DDX3XO00571 662 aaKnown RBP eCLIP11.23□□□□□ -0.613e-10■■■■□ 24
SMARCE1-202ENST00000348513 FCHO1O14526 889 aa11.23□□□□□ -0.61
SMARCE1-202ENST00000348513 FAM153BP0C7A2 387 aa11.23□□□□□ -0.61
SMARCE1-202ENST00000348513 RIPPLY1Q0D2K3 151 aa11.23□□□□□ -0.61
SMARCE1-202ENST00000348513 LSAMPQ13449 338 aa11.23□□□□□ -0.61
SMARCE1-202ENST00000348513 FAM153CQ494X1 144 aa11.23□□□□□ -0.61
SMARCE1-202ENST00000348513 PRAMEF19Q5SWL8 479 aa11.23□□□□□ -0.61
SMARCE1-202ENST00000348513 PTAR1Q7Z6K3 402 aaPredicted RBP11.23□□□□□ -0.61
SMARCE1-202ENST00000348513 NT5DC3Q86UY8 548 aa11.23□□□□□ -0.61
SMARCE1-202ENST00000348513 OSGEPL1Q9H4B0 414 aa11.23□□□□□ -0.61
SMARCE1-202ENST00000348513 UBA2Q9UBT2 640 aaPredicted RBP11.23□□□□□ -0.61
SMARCE1-202ENST00000348513 TSPAN16Q9UKR8 245 aa11.23□□□□□ -0.61
SMARCE1-202ENST00000348513 PREX1Q8TCU6 1659 aa11.23□□□□□ -0.61
SMARCE1-202ENST00000348513 SERPINB5P36952 375 aa11.23□□□□□ -0.61
SMARCE1-202ENST00000348513 MAGEA10P43363 369 aaPredicted RBP11.23□□□□□ -0.61
SMARCE1-202ENST00000348513 CDC16Q13042 620 aa11.23□□□□□ -0.61
SMARCE1-202ENST00000348513 HIST2H2ACQ16777 129 aaPredicted RBP11.23□□□□□ -0.61
SMARCE1-202ENST00000348513 DACT2Q5SW24 774 aa11.23□□□□□ -0.61
SMARCE1-202ENST00000348513 HIST2H2AA3Q6FI13 130 aa11.23□□□□□ -0.61
SMARCE1-202ENST00000348513 MRNIPQ6NTE8 343 aa11.23□□□□□ -0.61
SMARCE1-202ENST00000348513 AMIGO2Q86SJ2 522 aa11.23□□□□□ -0.61
SMARCE1-202ENST00000348513 ZNF556Q9HAH1 456 aa11.23□□□□□ -0.61
SMARCE1-202ENST00000348513 RIC8BQ9NVN3 520 aa11.23□□□□□ -0.61
SMARCE1-202ENST00000348513 MKS1Q9NXB0 559 aa11.23□□□□□ -0.61
SMARCE1-202ENST00000348513 HPSEQ9Y251 543 aa11.23□□□□□ -0.61
SMARCE1-202ENST00000348513 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.23□□□□□ -0.61
SMARCE1-202ENST00000348513 AAR2Q9Y312 384 aaKnown RBP11.23□□□□□ -0.61
SMARCE1-202ENST00000348513 PCDHB12Q9Y5F1 795 aa11.23□□□□□ -0.61
SMARCE1-202ENST00000348513 USP32Q8NFA0 1604 aa11.22□□□□□ -0.61
SMARCE1-202ENST00000348513 LACTBL1A8MY62 500 aa11.22□□□□□ -0.61
SMARCE1-202ENST00000348513 GLI1P08151 1106 aa11.22□□□□□ -0.61
SMARCE1-202ENST00000348513 TPH1P17752 444 aa11.22□□□□□ -0.61
SMARCE1-202ENST00000348513 CYP2F1P24903 491 aa11.22□□□□□ -0.61
SMARCE1-202ENST00000348513 STARP49675 285 aa11.22□□□□□ -0.61
SMARCE1-202ENST00000348513 DGKZQ13574 1117 aa11.22□□□□□ -0.61
SMARCE1-202ENST00000348513 PDK2Q15119 407 aa11.22□□□□□ -0.61
SMARCE1-202ENST00000348513 TAF5Q15542 800 aa11.22□□□□□ -0.61
SMARCE1-202ENST00000348513 HSD17B12Q53GQ0 312 aa11.22□□□□□ -0.61
SMARCE1-202ENST00000348513 CORO6Q6QEF8 472 aa11.22□□□□□ -0.61
SMARCE1-202ENST00000348513 MAGEB10Q96LZ2 347 aaPredicted RBP11.22□□□□□ -0.61
SMARCE1-202ENST00000348513 DGCR6LQ9BY27 220 aa11.22□□□□□ -0.61
SMARCE1-202ENST00000348513 XKR8Q9H6D3 395 aa11.22□□□□□ -0.61
SMARCE1-202ENST00000348513 UCKL1Q9NWZ5 548 aa11.22□□□□□ -0.61
SMARCE1-202ENST00000348513 TISP43B9A030 160 aa11.22□□□□□ -0.61
SMARCE1-202ENST00000348513 MUSKO15146 869 aa11.22□□□□□ -0.61
SMARCE1-202ENST00000348513 PEX1O43933 1283 aa11.22□□□□□ -0.61
SMARCE1-202ENST00000348513 SLURP2P0DP57 97 aa11.22□□□□□ -0.61
SMARCE1-202ENST00000348513 KLRC2P26717 231 aa11.22□□□□□ -0.61
SMARCE1-202ENST00000348513 SLC26A2P50443 739 aa11.22□□□□□ -0.61
SMARCE1-202ENST00000348513 VGLL4Q14135 290 aa11.22□□□□□ -0.61
SMARCE1-202ENST00000348513 DENND1BQ6P3S1 775 aa11.22□□□□□ -0.61
SMARCE1-202ENST00000348513 TMC2Q8TDI7 906 aa11.22□□□□□ -0.61
SMARCE1-202ENST00000348513 VPS33AQ96AX1 596 aa11.22□□□□□ -0.61
SMARCE1-202ENST00000348513 OSBPL7Q9BZF2 842 aa11.22□□□□□ -0.61
SMARCE1-202ENST00000348513 DMGDHQ9UI17 866 aaKnown RBP11.22□□□□□ -0.61
SMARCE1-202ENST00000348513 PIPSLA2A3N6 862 aa11.22□□□□□ -0.61
SMARCE1-202ENST00000348513 GJB6O95452 261 aa11.22□□□□□ -0.61
SMARCE1-202ENST00000348513 CCNE2O96020 404 aa11.22□□□□□ -0.61
SMARCE1-202ENST00000348513 BDNFP23560 247 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms