RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 ELAVL3Q14576 367 aaKnown RBP12.07□□□□□ -0.48
SNCA-202ENST00000345009 RFTN1Q14699 578 aaPredicted RBP12.07□□□□□ -0.48
SNCA-202ENST00000345009 PAFAH1B3Q15102 231 aaKnown RBP12.07□□□□□ -0.48
SNCA-202ENST00000345009 PDK1Q15118 436 aa12.07□□□□□ -0.48
SNCA-202ENST00000345009 PPP2R5EQ16537 467 aa12.07□□□□□ -0.48
SNCA-202ENST00000345009 USP39Q53GS9 565 aaKnown RBP12.07□□□□□ -0.48
SNCA-202ENST00000345009 AFMIDQ63HM1 303 aa12.07□□□□□ -0.48
SNCA-202ENST00000345009 ANO7Q6IWH7 933 aa12.07□□□□□ -0.48
SNCA-202ENST00000345009 TIGD7Q6NT04 549 aaPredicted RBP12.07□□□□□ -0.48
SNCA-202ENST00000345009 ZC3H14Q6PJT7 736 aaKnown RBP12.07□□□□□ -0.48
SNCA-202ENST00000345009 MFSD7Q6UXD7 560 aa12.07□□□□□ -0.48
SNCA-202ENST00000345009 LINGO4Q6UY18 593 aa12.07□□□□□ -0.48
SNCA-202ENST00000345009 SPOCD1Q6ZMY3 1216 aa12.07□□□□□ -0.48
SNCA-202ENST00000345009 ATPAF2Q8N5M1 289 aa12.07□□□□□ -0.48
SNCA-202ENST00000345009 PCDH20Q8N6Y1 951 aaKnown RBP12.07□□□□□ -0.48
SNCA-202ENST00000345009 OR2T3Q8NH03 318 aa12.07□□□□□ -0.48
SNCA-202ENST00000345009 HMGB4Q8WW32 186 aa12.07□□□□□ -0.48
SNCA-202ENST00000345009 ATRIPQ8WXE1 791 aa12.07□□□□□ -0.48
SNCA-202ENST00000345009 OR8D1Q8WZ84 308 aa12.07□□□□□ -0.48
SNCA-202ENST00000345009 PRCCQ92733 491 aaPredicted RBP12.07□□□□□ -0.48
SNCA-202ENST00000345009 KRT35Q92764 455 aa12.07□□□□□ -0.48
SNCA-202ENST00000345009 ISG20Q96AZ6 181 aaKnown RBP12.07□□□□□ -0.48
SNCA-202ENST00000345009 ZNF599Q96NL3 588 aa12.07□□□□□ -0.48
SNCA-202ENST00000345009 FERMT1Q9BQL6 677 aa12.07□□□□□ -0.48
SNCA-202ENST00000345009 BRD8Q9H0E9 1235 aa12.07□□□□□ -0.48
SNCA-202ENST00000345009 NOL6Q9H6R4 1146 aaKnown RBP12.07□□□□□ -0.48
SNCA-202ENST00000345009 UBA2Q9UBT2 640 aaPredicted RBP12.07□□□□□ -0.48
SNCA-202ENST00000345009 IPO11Q9UI26 975 aaKnown RBP12.07□□□□□ -0.48
SNCA-202ENST00000345009 HCN2Q9UL51 889 aa12.07□□□□□ -0.48
SNCA-202ENST00000345009 SCML1Q9UN30 329 aa12.07□□□□□ -0.48
SNCA-202ENST00000345009 CAPN6Q9Y6Q1 641 aa12.07□□□□□ -0.48
SNCA-202ENST00000345009 A0A0U1RQJ8 604 aa12.06□□□□□ -0.48
SNCA-202ENST00000345009 A0A1W2PQF6 199 aa12.06□□□□□ -0.48
SNCA-202ENST00000345009 C3orf70A6NLC5 250 aaPredicted RBP12.06□□□□□ -0.48
SNCA-202ENST00000345009 TTC34A8MYJ7 566 aa12.06□□□□□ -0.48
SNCA-202ENST00000345009 PPP1R12AO14974 1030 aaPredicted RBP12.06□□□□□ -0.48
SNCA-202ENST00000345009 AXIN1O15169 862 aa12.06□□□□□ -0.48
SNCA-202ENST00000345009 ALOX15BO15296 676 aa12.06□□□□□ -0.48
SNCA-202ENST00000345009 CST8O60676 142 aa12.06□□□□□ -0.48
SNCA-202ENST00000345009 PRAMEF11O60813 436 aa12.06□□□□□ -0.48
SNCA-202ENST00000345009 ZNF217O75362 1048 aa12.06□□□□□ -0.48
SNCA-202ENST00000345009 NEBLO76041 1014 aa12.06□□□□□ -0.48
SNCA-202ENST00000345009 MT-CO1P00395 513 aa12.06□□□□□ -0.48
SNCA-202ENST00000345009 SRCP12931 536 aa12.06□□□□□ -0.48
SNCA-202ENST00000345009 HLA-EP13747 358 aa12.06□□□□□ -0.48
SNCA-202ENST00000345009 CNR2P34972 360 aa12.06□□□□□ -0.48
SNCA-202ENST00000345009 NUMBP49757 651 aa12.06□□□□□ -0.48
SNCA-202ENST00000345009 STK19P49842 368 aaPredicted RBP12.06□□□□□ -0.48
SNCA-202ENST00000345009 PEX5P50542 639 aa12.06□□□□□ -0.48
SNCA-202ENST00000345009 RENBPP51606 427 aa12.06□□□□□ -0.48
SNCA-202ENST00000345009 SNRPD1P62314 119 aaKnown RBP12.06□□□□□ -0.48
SNCA-202ENST00000345009 ZBTB16Q05516 673 aa12.06□□□□□ -0.48
SNCA-202ENST00000345009 RAD51Q06609 339 aa12.06□□□□□ -0.48
SNCA-202ENST00000345009 CCDC15Q0P6D6 951 aa12.06□□□□□ -0.48
SNCA-202ENST00000345009 FAM46CQ5VWP2 391 aa12.06□□□□□ -0.48
SNCA-202ENST00000345009 KAZNQ674X7 775 aa12.06□□□□□ -0.48
SNCA-202ENST00000345009 NCBP2-AS2Q69YL0 99 aa12.06□□□□□ -0.48
SNCA-202ENST00000345009 SLC9A4Q6AI14 798 aa12.06□□□□□ -0.48
SNCA-202ENST00000345009 LONP2Q86WA8 852 aa12.06□□□□□ -0.48
SNCA-202ENST00000345009 TMPRSS6Q8IU80 811 aa12.06□□□□□ -0.48
SNCA-202ENST00000345009 NPWQ8N729 165 aa12.06□□□□□ -0.48
SNCA-202ENST00000345009 PQLC3Q8N755 202 aa12.06□□□□□ -0.48
SNCA-202ENST00000345009 P3H4Q92791 437 aa12.06□□□□□ -0.48
SNCA-202ENST00000345009 TRIM44Q96DX7 344 aaPredicted RBP12.06□□□□□ -0.48
SNCA-202ENST00000345009 SIPA1Q96FS4 1042 aa12.06□□□□□ -0.48
SNCA-202ENST00000345009 HES6Q96HZ4 224 aa12.06□□□□□ -0.48
SNCA-202ENST00000345009 HHIPQ96QV1 700 aa12.06□□□□□ -0.48
SNCA-202ENST00000345009 KLC2Q9H0B6 622 aa12.06□□□□□ -0.48
SNCA-202ENST00000345009 PRSS16Q9NQE7 514 aa12.06□□□□□ -0.48
SNCA-202ENST00000345009 ETNK2Q9NVF9 386 aa12.06□□□□□ -0.48
SNCA-202ENST00000345009 ZSCAN32Q9NX65 697 aa12.06□□□□□ -0.48
SNCA-202ENST00000345009 TRMT1Q9NXH9 659 aaKnown RBP12.06□□□□□ -0.48
SNCA-202ENST00000345009 PCDHGA2Q9Y5H1 932 aa12.06□□□□□ -0.48
SNCA-202ENST00000345009 HEY1Q9Y5J3 304 aa12.06□□□□□ -0.48
SNCA-202ENST00000345009 MUC6Q6W4X9 2439 aa12.05□□□□□ -0.48
SNCA-202ENST00000345009 K7ESF4 209 aa12.05□□□□□ -0.48
SNCA-202ENST00000345009 MCF2LO15068 1137 aa12.05□□□□□ -0.48
SNCA-202ENST00000345009 BNIP3LO60238 219 aa12.05□□□□□ -0.48
SNCA-202ENST00000345009 ZNF189O75820 626 aaPredicted RBP12.05□□□□□ -0.48
SNCA-202ENST00000345009 DNTTP04053 509 aa12.05□□□□□ -0.48
SNCA-202ENST00000345009 PRNPP04156 253 aa12.05□□□□□ -0.48
SNCA-202ENST00000345009 SP9P0CG40 484 aa12.05□□□□□ -0.48
SNCA-202ENST00000345009 TGM2P21980 687 aa12.05□□□□□ -0.48
SNCA-202ENST00000345009 GLDCP23378 1020 aa12.05□□□□□ -0.48
SNCA-202ENST00000345009 PTPN7P35236 360 aa12.05□□□□□ -0.48
SNCA-202ENST00000345009 HSPA9P38646 679 aaKnown RBP12.05□□□□□ -0.48
SNCA-202ENST00000345009 GARSP41250 739 aaKnown RBP12.05□□□□□ -0.48
SNCA-202ENST00000345009 ARF5P84085 180 aa12.05□□□□□ -0.48
SNCA-202ENST00000345009 ZNF33AQ06730 810 aa12.05□□□□□ -0.48
SNCA-202ENST00000345009 GALNT2Q10471 571 aa12.05□□□□□ -0.48
SNCA-202ENST00000345009 TAZQ16635 292 aa12.05□□□□□ -0.48
SNCA-202ENST00000345009 TTC31Q49AM3 519 aaPredicted RBP12.05□□□□□ -0.48
SNCA-202ENST00000345009 CARD16Q5EG05 197 aa12.05□□□□□ -0.48
SNCA-202ENST00000345009 C9orf64Q5T6V5 341 aa12.05□□□□□ -0.48
SNCA-202ENST00000345009 SEL1L2Q5TEA6 688 aa12.05□□□□□ -0.48
SNCA-202ENST00000345009 MEI1Q5TIA1 1274 aa12.05□□□□□ -0.48
SNCA-202ENST00000345009 ZNF776Q68DI1 518 aaPredicted RBP12.05□□□□□ -0.48
SNCA-202ENST00000345009 HEATR6Q6AI08 1181 aaKnown RBP12.05□□□□□ -0.48
SNCA-202ENST00000345009 KIAA1211LQ6NV74 962 aa12.05□□□□□ -0.48
SNCA-202ENST00000345009 C22orf39Q6P5X5 142 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms