RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 TESMINQ9Y4I5 508 aa18.79■□□□□ 0.6
SMPD1-201ENST00000342245 RNF103-CHMP3A0A140T963 221 aa18.79■□□□□ 0.6
SMPD1-201ENST00000342245 DYRK3O43781 588 aa18.79■□□□□ 0.6
SMPD1-201ENST00000342245 TIPRLO75663 272 aa18.79■□□□□ 0.6
SMPD1-201ENST00000342245 ALX3O95076 343 aa18.79■□□□□ 0.6
SMPD1-201ENST00000342245 CRYZL1O95825 349 aa18.79■□□□□ 0.6
SMPD1-201ENST00000342245 ABCB1P08183 1280 aaPredicted RBP18.79■□□□□ 0.6
SMPD1-201ENST00000342245 GARTP22102 1010 aa18.79■□□□□ 0.6
SMPD1-201ENST00000342245 TYK2P29597 1187 aa18.79■□□□□ 0.6
SMPD1-201ENST00000342245 SERPINB10P48595 397 aa18.79■□□□□ 0.6
SMPD1-201ENST00000342245 PRKAA1Q13131 559 aa18.79■□□□□ 0.6
SMPD1-201ENST00000342245 SMTNL2Q2TAL5 461 aa18.79■□□□□ 0.6
SMPD1-201ENST00000342245 SLFN13Q68D06 897 aa18.79■□□□□ 0.6
SMPD1-201ENST00000342245 GTF2IRD2BQ6EKJ0 949 aa18.79■□□□□ 0.6
SMPD1-201ENST00000342245 GTF2IRD2Q86UP8 949 aa18.79■□□□□ 0.6
SMPD1-201ENST00000342245 PIK3C3Q8NEB9 887 aa18.79■□□□□ 0.6
SMPD1-201ENST00000342245 CYGBQ8WWM9 190 aa18.79■□□□□ 0.6
SMPD1-201ENST00000342245 DCPSQ96C86 337 aaKnown RBP18.79■□□□□ 0.6
SMPD1-201ENST00000342245 NPAS2Q99743 824 aa18.79■□□□□ 0.6
SMPD1-201ENST00000342245 PCDHAC1Q9H158 963 aa18.79■□□□□ 0.6
SMPD1-201ENST00000342245 WDR55Q9H6Y2 383 aaPredicted RBP18.79■□□□□ 0.6
SMPD1-201ENST00000342245 FBXO8Q9NRD0 319 aa18.79■□□□□ 0.6
SMPD1-201ENST00000342245 PCDHGA3Q9Y5H0 932 aa18.79■□□□□ 0.6
SMPD1-201ENST00000342245 PCDHAC2Q9Y5I4 1007 aa18.79■□□□□ 0.6
SMPD1-201ENST00000342245 H0YIN7 160 aa18.78■□□□□ 0.6
SMPD1-201ENST00000342245 IL10P22301 178 aa18.78■□□□□ 0.6
SMPD1-201ENST00000342245 LRP8Q14114 963 aa18.78■□□□□ 0.6
SMPD1-201ENST00000342245 SELPLGQ14242 412 aa18.78■□□□□ 0.6
SMPD1-201ENST00000342245 LMBRD2Q68DH5 695 aaPredicted RBP18.78■□□□□ 0.6
SMPD1-201ENST00000342245 SPRED1Q7Z699 444 aa18.78■□□□□ 0.6
SMPD1-201ENST00000342245 ZCCHC7Q8N3Z6 543 aaKnown RBP18.78■□□□□ 0.6
SMPD1-201ENST00000342245 LEMD2Q8NC56 503 aa18.78■□□□□ 0.6
SMPD1-201ENST00000342245 ELMO3Q96BJ8 720 aa18.78■□□□□ 0.6
SMPD1-201ENST00000342245 MAELQ96JY0 434 aaKnown RBP18.78■□□□□ 0.6
SMPD1-201ENST00000342245 ATP13A3Q9H7F0 1226 aa18.78■□□□□ 0.6
SMPD1-201ENST00000342245 IFT80Q9P2H3 777 aaPredicted RBP18.78■□□□□ 0.6
SMPD1-201ENST00000342245 CD300AQ9UGN4 299 aa18.78■□□□□ 0.6
SMPD1-201ENST00000342245 SBF2Q86WG5 1849 aa18.78■□□□□ 0.6
SMPD1-201ENST00000342245 A0A1W2PQ67 120 aa18.78■□□□□ 0.6
SMPD1-201ENST00000342245 APOA4P06727 396 aa18.78■□□□□ 0.6
SMPD1-201ENST00000342245 FCGR1AP12314 374 aa18.78■□□□□ 0.6
SMPD1-201ENST00000342245 RARRES1P49788 294 aa18.78■□□□□ 0.6
SMPD1-201ENST00000342245 IGBP1P78318 339 aa18.78■□□□□ 0.6
SMPD1-201ENST00000342245 INPP5AQ14642 412 aa18.78■□□□□ 0.6
SMPD1-201ENST00000342245 ARHGEF6Q15052 776 aa18.78■□□□□ 0.6
SMPD1-201ENST00000342245 CCDC14Q49A88 953 aa18.78■□□□□ 0.6
SMPD1-201ENST00000342245 SIX5Q8N196 739 aa18.78■□□□□ 0.6
SMPD1-201ENST00000342245 EGLN2Q96KS0 407 aa18.78■□□□□ 0.6
SMPD1-201ENST00000342245 BTN2A3PQ96KV6 586 aa18.78■□□□□ 0.6
SMPD1-201ENST00000342245 SEZ6LQ9BYH1 1024 aa18.78■□□□□ 0.6
SMPD1-201ENST00000342245 NEK6Q9HC98 313 aa18.78■□□□□ 0.6
SMPD1-201ENST00000342245 PKD2L1Q9P0L9 805 aa18.78■□□□□ 0.6
SMPD1-201ENST00000342245 MTRRQ9UBK8 725 aa18.78■□□□□ 0.6
SMPD1-201ENST00000342245 AQP12BA6NM10 295 aa18.77■□□□□ 0.6
SMPD1-201ENST00000342245 E7ENX8 843 aa18.77■□□□□ 0.6
SMPD1-201ENST00000342245 NEMP1O14524 444 aa18.77■□□□□ 0.6
SMPD1-201ENST00000342245 TEX28O15482 410 aa18.77■□□□□ 0.6
SMPD1-201ENST00000342245 KCNN4O15554 427 aa18.77■□□□□ 0.6
SMPD1-201ENST00000342245 ABCB7O75027 752 aa18.77■□□□□ 0.6
SMPD1-201ENST00000342245 FASP25445 335 aa18.77■□□□□ 0.6
SMPD1-201ENST00000342245 IL1R2P27930 398 aa18.77■□□□□ 0.6
SMPD1-201ENST00000342245 ILF2Q12905 390 aaKnown RBP18.77■□□□□ 0.6
SMPD1-201ENST00000342245 SLC12A1Q13621 1099 aa18.77■□□□□ 0.6
SMPD1-201ENST00000342245 C15orf52Q6ZUT6 534 aaKnown RBP18.77■□□□□ 0.6
SMPD1-201ENST00000342245 AQP12AQ8IXF9 295 aa18.77■□□□□ 0.6
SMPD1-201ENST00000342245 HCAR2Q8TDS4 363 aa18.77■□□□□ 0.6
SMPD1-201ENST00000342245 ISL2Q96A47 359 aa18.77■□□□□ 0.6
SMPD1-201ENST00000342245 CENPNQ96H22 339 aaPredicted RBP18.77■□□□□ 0.6
SMPD1-201ENST00000342245 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.77■□□□□ 0.6
SMPD1-201ENST00000342245 ENPP5Q9UJA9 477 aa18.77■□□□□ 0.6
SMPD1-201ENST00000342245 BCLAF3A2AJT9 711 aaKnown RBP18.77■□□□□ 0.59
SMPD1-201ENST00000342245 SYCE1LA8MT33 242 aa18.77■□□□□ 0.59
SMPD1-201ENST00000342245 A8MU76 341 aa18.77■□□□□ 0.59
SMPD1-201ENST00000342245 H0YAE9 185 aa18.77■□□□□ 0.59
SMPD1-201ENST00000342245 LYPLA2O95372 231 aa18.77■□□□□ 0.59
SMPD1-201ENST00000342245 MYCLP1P12525 358 aaPredicted RBP18.77■□□□□ 0.59
SMPD1-201ENST00000342245 GSTM2P28161 218 aa18.77■□□□□ 0.59
SMPD1-201ENST00000342245 CCND2P30279 289 aa18.77■□□□□ 0.59
SMPD1-201ENST00000342245 HOXA13P31271 388 aaPredicted RBP18.77■□□□□ 0.59
SMPD1-201ENST00000342245 CDH5P33151 784 aaPredicted RBP18.77■□□□□ 0.59
SMPD1-201ENST00000342245 NFIXQ14938 502 aa18.77■□□□□ 0.59
SMPD1-201ENST00000342245 LRIT3Q3SXY7 679 aa18.77■□□□□ 0.59
SMPD1-201ENST00000342245 KCNT1Q5JUK3 1230 aa18.77■□□□□ 0.59
SMPD1-201ENST00000342245 HACD2Q6Y1H2 254 aa18.77■□□□□ 0.59
SMPD1-201ENST00000342245 USP51Q70EK9 711 aa18.77■□□□□ 0.59
SMPD1-201ENST00000342245 BTLAQ7Z6A9 289 aa18.77■□□□□ 0.59
SMPD1-201ENST00000342245 ZBTB46Q86UZ6 589 aa18.77■□□□□ 0.59
SMPD1-201ENST00000342245 SMPD3Q9NY59 655 aaPredicted RBP18.77■□□□□ 0.59
SMPD1-201ENST00000342245 TXNDC16Q9P2K2 825 aa18.77■□□□□ 0.59
SMPD1-201ENST00000342245 ZNF229Q9UJW7 825 aa18.77■□□□□ 0.59
SMPD1-201ENST00000342245 SLC27A5Q9Y2P5 690 aa18.77■□□□□ 0.59
SMPD1-201ENST00000342245 TIMM44O43615 452 aa18.76■□□□□ 0.59
SMPD1-201ENST00000342245 AMHP03971 560 aa18.76■□□□□ 0.59
SMPD1-201ENST00000342245 GSNP06396 782 aa18.76■□□□□ 0.59
SMPD1-201ENST00000342245 CD1EP15812 388 aa18.76■□□□□ 0.59
SMPD1-201ENST00000342245 ZNF132P52740 706 aa18.76■□□□□ 0.59
SMPD1-201ENST00000342245 GNG2P59768 71 aa18.76■□□□□ 0.59
SMPD1-201ENST00000342245 DNASE1L3Q13609 305 aa18.76■□□□□ 0.59
SMPD1-201ENST00000342245 PTAR1Q7Z6K3 402 aaPredicted RBP18.76■□□□□ 0.59
SMPD1-201ENST00000342245 DSG4Q86SJ6 1040 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms