RNA–Protein interactions for RNA: ENST00000340882.2

NECTIN1-202, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-202ENST00000340882 PARGQ86W56 976 aa16.76■□□□□ 0.27
NECTIN1-202ENST00000340882 DCP2Q8IU60 420 aaKnown RBP16.76■□□□□ 0.27
NECTIN1-202ENST00000340882 TPCN2Q8NHX9 752 aa16.76■□□□□ 0.27
NECTIN1-202ENST00000340882 INTS4Q96HW7 963 aaKnown RBP16.76■□□□□ 0.27
NECTIN1-202ENST00000340882 CCDC3Q9BQI4 270 aa16.76■□□□□ 0.27
NECTIN1-202ENST00000340882 SLC17A9Q9BYT1 436 aa16.76■□□□□ 0.27
NECTIN1-202ENST00000340882 SYNDIG1Q9H7V2 258 aa16.76■□□□□ 0.27
NECTIN1-202ENST00000340882 RABGEF1Q9UJ41 708 aa16.76■□□□□ 0.27
NECTIN1-202ENST00000340882 A0A1B0GVL5 298 aa16.75■□□□□ 0.27
NECTIN1-202ENST00000340882 NTN3O00634 580 aaPredicted RBP16.75■□□□□ 0.27
NECTIN1-202ENST00000340882 SNAP91O60641 907 aa16.75■□□□□ 0.27
NECTIN1-202ENST00000340882 PAEPP09466 180 aa16.75■□□□□ 0.27
NECTIN1-202ENST00000340882 UGT1A5P35504 534 aa16.75■□□□□ 0.27
NECTIN1-202ENST00000340882 RPL34P49207 117 aaKnown RBP16.75■□□□□ 0.27
NECTIN1-202ENST00000340882 PDE1CQ14123 709 aaPredicted RBP16.75■□□□□ 0.27
NECTIN1-202ENST00000340882 CLCA4Q14CN2 919 aa16.75■□□□□ 0.27
NECTIN1-202ENST00000340882 XKR5Q6UX68 686 aa16.75■□□□□ 0.27
NECTIN1-202ENST00000340882 ERN2Q76MJ5 926 aaKnown RBP16.75■□□□□ 0.27
NECTIN1-202ENST00000340882 VASH2Q86V25 355 aa16.75■□□□□ 0.27
NECTIN1-202ENST00000340882 JAMLQ86YT9 394 aa16.75■□□□□ 0.27
NECTIN1-202ENST00000340882 GUF1Q8N442 669 aaKnown RBP16.75■□□□□ 0.27
NECTIN1-202ENST00000340882 TMIEQ8NEW7 156 aa16.75■□□□□ 0.27
NECTIN1-202ENST00000340882 HTR3CQ8WXA8 447 aa16.75■□□□□ 0.27
NECTIN1-202ENST00000340882 PPP1R13BQ96KQ4 1090 aa16.75■□□□□ 0.27
NECTIN1-202ENST00000340882 PSMB7Q99436 277 aa16.75■□□□□ 0.27
NECTIN1-202ENST00000340882 KLF6Q99612 283 aaPredicted RBP16.75■□□□□ 0.27
NECTIN1-202ENST00000340882 SEMA3CQ99985 751 aa16.75■□□□□ 0.27
NECTIN1-202ENST00000340882 PCDHGA7Q9Y5G6 932 aa16.75■□□□□ 0.27
NECTIN1-202ENST00000340882 UNC79Q9P2D8 2635 aa16.74■□□□□ 0.27
NECTIN1-202ENST00000340882 PLD2O14939 933 aa16.74■□□□□ 0.27
NECTIN1-202ENST00000340882 GP1BBP13224 206 aa16.74■□□□□ 0.27
NECTIN1-202ENST00000340882 PFKFB1P16118 471 aa16.74■□□□□ 0.27
NECTIN1-202ENST00000340882 RRM1P23921 792 aa16.74■□□□□ 0.27
NECTIN1-202ENST00000340882 YWHAEP62258 255 aaKnown RBP16.74■□□□□ 0.27
NECTIN1-202ENST00000340882 SPIDRQ14159 915 aa16.74■□□□□ 0.27
NECTIN1-202ENST00000340882 TAF5Q15542 800 aa16.74■□□□□ 0.27
NECTIN1-202ENST00000340882 ARSIQ5FYB1 569 aa16.74■□□□□ 0.27
NECTIN1-202ENST00000340882 DCAF17Q5H9S7 520 aaPredicted RBP16.74■□□□□ 0.27
NECTIN1-202ENST00000340882 TCERG1LQ5VWI1 586 aa16.74■□□□□ 0.27
NECTIN1-202ENST00000340882 C14orf80Q86SX3 495 aa16.74■□□□□ 0.27
NECTIN1-202ENST00000340882 SMYD4Q8IYR2 804 aaPredicted RBP16.74■□□□□ 0.27
NECTIN1-202ENST00000340882 FBXO39Q8N4B4 442 aa16.74■□□□□ 0.27
NECTIN1-202ENST00000340882 ATP6V0D2Q8N8Y2 350 aa16.74■□□□□ 0.27
NECTIN1-202ENST00000340882 GRIN3AQ8TCU5 1115 aa16.74■□□□□ 0.27
NECTIN1-202ENST00000340882 LIN37Q96GY3 246 aaPredicted RBP16.74■□□□□ 0.27
NECTIN1-202ENST00000340882 IL12RB2Q99665 862 aa16.74■□□□□ 0.27
NECTIN1-202ENST00000340882 FOXP3Q9BZS1 431 aa16.74■□□□□ 0.27
NECTIN1-202ENST00000340882 EPB41L5Q9HCM4 733 aa16.74■□□□□ 0.27
NECTIN1-202ENST00000340882 NCKIPSDQ9NZQ3 722 aa16.74■□□□□ 0.27
NECTIN1-202ENST00000340882 VPS28Q9UK41 221 aa16.74■□□□□ 0.27
NECTIN1-202ENST00000340882 HS3ST2Q9Y278 367 aa16.74■□□□□ 0.27
NECTIN1-202ENST00000340882 PCDHB4Q9Y5E5 795 aa16.74■□□□□ 0.27
NECTIN1-202ENST00000340882 SPTAN1Q13813 2472 aaKnown RBP16.74■□□□□ 0.27
NECTIN1-202ENST00000340882 H3BM21 787 aa16.73■□□□□ 0.27
NECTIN1-202ENST00000340882 AGRPO00253 132 aa16.73■□□□□ 0.27
NECTIN1-202ENST00000340882 TPP1O14773 563 aa16.73■□□□□ 0.27
NECTIN1-202ENST00000340882 STX10O60499 249 aa16.73■□□□□ 0.27
NECTIN1-202ENST00000340882 CELA2BP08218 269 aaPredicted RBP16.73■□□□□ 0.27
NECTIN1-202ENST00000340882 GPD2P43304 727 aa16.73■□□□□ 0.27
NECTIN1-202ENST00000340882 ADKP55263 362 aaKnown RBP16.73■□□□□ 0.27
NECTIN1-202ENST00000340882 DPYDQ12882 1025 aa16.73■□□□□ 0.27
NECTIN1-202ENST00000340882 RABGAP1LQ5R372 815 aa16.73■□□□□ 0.27
NECTIN1-202ENST00000340882 BEND5Q7L4P6 421 aa16.73■□□□□ 0.27
NECTIN1-202ENST00000340882 RAB11FIP2Q7L804 512 aa16.73■□□□□ 0.27
NECTIN1-202ENST00000340882 ATP11CQ8NB49 1132 aa16.73■□□□□ 0.27
NECTIN1-202ENST00000340882 FAM174AQ8TBP5 190 aa16.73■□□□□ 0.27
NECTIN1-202ENST00000340882 RPRD1AQ96P16 312 aaPredicted RBP16.73■□□□□ 0.27
NECTIN1-202ENST00000340882 HDAC8Q9BY41 377 aa16.73■□□□□ 0.27
NECTIN1-202ENST00000340882 CLPBQ9H078 707 aa16.73■□□□□ 0.27
NECTIN1-202ENST00000340882 TNKS2Q9H2K2 1166 aa16.73■□□□□ 0.27
NECTIN1-202ENST00000340882 ST7Q9NRC1 585 aa16.73■□□□□ 0.27
NECTIN1-202ENST00000340882 ACSL6Q9UKU0 697 aa16.73■□□□□ 0.27
NECTIN1-202ENST00000340882 VANGL2Q9ULK5 521 aa16.73■□□□□ 0.27
NECTIN1-202ENST00000340882 PCDHGA4Q9Y5G9 962 aa16.73■□□□□ 0.27
NECTIN1-202ENST00000340882 LRP4O75096 1905 aa16.72■□□□□ 0.27
NECTIN1-202ENST00000340882 LRRK1Q38SD2 2015 aa16.72■□□□□ 0.27
NECTIN1-202ENST00000340882 DOCK4Q8N1I0 1966 aa16.72■□□□□ 0.27
NECTIN1-202ENST00000340882 SYNJ2BP-COX16A0A087WUM0 186 aa16.72■□□□□ 0.27
NECTIN1-202ENST00000340882 LEFTY1O75610 366 aa16.72■□□□□ 0.27
NECTIN1-202ENST00000340882 CNTN5O94779 1100 aa16.72■□□□□ 0.27
NECTIN1-202ENST00000340882 EPB41P11171 864 aaKnown RBP16.72■□□□□ 0.27
NECTIN1-202ENST00000340882 RABIFP47224 123 aa16.72■□□□□ 0.27
NECTIN1-202ENST00000340882 AUHQ13825 339 aaKnown RBP16.72■□□□□ 0.27
NECTIN1-202ENST00000340882 EDRF1Q3B7T1 1238 aa16.72■□□□□ 0.27
NECTIN1-202ENST00000340882 TTC39BQ5VTQ0 682 aaPredicted RBP16.72■□□□□ 0.27
NECTIN1-202ENST00000340882 DENND1BQ6P3S1 775 aa16.72■□□□□ 0.27
NECTIN1-202ENST00000340882 LINGO4Q6UY18 593 aa16.72■□□□□ 0.27
NECTIN1-202ENST00000340882 PTRH1Q86Y79 214 aaKnown RBP16.72■□□□□ 0.27
NECTIN1-202ENST00000340882 FUCA2Q9BTY2 467 aa16.72■□□□□ 0.27
NECTIN1-202ENST00000340882 LRRC61Q9BV99 259 aa16.72■□□□□ 0.27
NECTIN1-202ENST00000340882 UPF2Q9HAU5 1272 aaKnown RBP16.72■□□□□ 0.27
NECTIN1-202ENST00000340882 DYRK4Q9NR20 520 aa16.72■□□□□ 0.27
NECTIN1-202ENST00000340882 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.72■□□□□ 0.27
NECTIN1-202ENST00000340882 COX16Q9P0S2 106 aa16.72■□□□□ 0.27
NECTIN1-202ENST00000340882 IPO11Q9UI26 975 aaKnown RBP16.72■□□□□ 0.27
NECTIN1-202ENST00000340882 VPS51Q9UID3 782 aa16.72■□□□□ 0.27
NECTIN1-202ENST00000340882 PADI4Q9UM07 663 aa16.72■□□□□ 0.27
NECTIN1-202ENST00000340882 HPSEQ9Y251 543 aa16.72■□□□□ 0.27
NECTIN1-202ENST00000340882 FADS3Q9Y5Q0 445 aa16.72■□□□□ 0.27
NECTIN1-202ENST00000340882 WASF2Q9Y6W5 498 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms