RNA–Protein interactions for RNA: ENST00000340019.4

TMC1-202, Transcript of transmembrane channel like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TMC1, Length 3,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-202ENST00000340019 PGBD5Q8N414 524 aa7.97□□□□□ -1.13
TMC1-202ENST00000340019 ZNF557Q8N988 423 aaPredicted RBP7.97□□□□□ -1.13
TMC1-202ENST00000340019 ZFYVE19Q96K21 471 aa7.97□□□□□ -1.13
TMC1-202ENST00000340019 PWWP2AQ96N64 755 aa7.97□□□□□ -1.13
TMC1-202ENST00000340019 GUCD1Q96NT3 240 aa7.97□□□□□ -1.13
TMC1-202ENST00000340019 FCRL5Q96RD9 977 aa7.97□□□□□ -1.13
TMC1-202ENST00000340019 SLC2A11Q9BYW1 496 aa7.97□□□□□ -1.13
TMC1-202ENST00000340019 FOXP3Q9BZS1 431 aa7.97□□□□□ -1.13
TMC1-202ENST00000340019 HPS4Q9NQG7 708 aa7.97□□□□□ -1.13
TMC1-202ENST00000340019 MTRF1LQ9UGC7 380 aaKnown RBP7.97□□□□□ -1.13
TMC1-202ENST00000340019 RSPH14Q9UHP6 348 aa7.97□□□□□ -1.13
TMC1-202ENST00000340019 VPS28Q9UK41 221 aa7.97□□□□□ -1.13
TMC1-202ENST00000340019 HPCAL4Q9UM19 191 aa7.97□□□□□ -1.13
TMC1-202ENST00000340019 ACTL7AQ9Y615 435 aa7.97□□□□□ -1.13
TMC1-202ENST00000340019 CBX4O00257 560 aa7.97□□□□□ -1.13
TMC1-202ENST00000340019 SNAP91O60641 907 aa7.97□□□□□ -1.13
TMC1-202ENST00000340019 ECI2O75521 394 aa7.97□□□□□ -1.13
TMC1-202ENST00000340019 ADH1CP00326 375 aa7.97□□□□□ -1.13
TMC1-202ENST00000340019 APRTP07741 180 aa7.97□□□□□ -1.13
TMC1-202ENST00000340019 ADH5P11766 374 aa7.97□□□□□ -1.13
TMC1-202ENST00000340019 ARSAP15289 507 aa7.97□□□□□ -1.13
TMC1-202ENST00000340019 MMP13P45452 471 aa7.97□□□□□ -1.13
TMC1-202ENST00000340019 RFTN1Q14699 578 aaPredicted RBP7.97□□□□□ -1.13
TMC1-202ENST00000340019 PDGFRLQ15198 375 aa7.97□□□□□ -1.13
TMC1-202ENST00000340019 PLEKHG6Q3KR16 790 aa7.97□□□□□ -1.13
TMC1-202ENST00000340019 ALG1LQ6GMV1 187 aa7.97□□□□□ -1.13
TMC1-202ENST00000340019 LEKR1Q6ZMV7 388 aa7.97□□□□□ -1.13
TMC1-202ENST00000340019 ZNF534Q76KX8 674 aa7.97□□□□□ -1.13
TMC1-202ENST00000340019 OTOP3Q7RTS5 596 aa7.97□□□□□ -1.13
TMC1-202ENST00000340019 TMC3Q7Z5M5 1100 aa7.97□□□□□ -1.13
TMC1-202ENST00000340019 CCDC117Q8IWD4 279 aaPredicted RBP7.97□□□□□ -1.13
TMC1-202ENST00000340019 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.97□□□□□ -1.13
TMC1-202ENST00000340019 MCUQ8NE86 351 aa7.97□□□□□ -1.13
TMC1-202ENST00000340019 NSMCE1Q8WV22 266 aa7.97□□□□□ -1.13
TMC1-202ENST00000340019 ATP2A3Q93084 1043 aa7.97□□□□□ -1.13
TMC1-202ENST00000340019 ACDQ96AP0 544 aa7.97□□□□□ -1.13
TMC1-202ENST00000340019 GDAP1L1Q96MZ0 367 aa7.97□□□□□ -1.13
TMC1-202ENST00000340019 PHACTR1Q9C0D0 580 aa7.97□□□□□ -1.13
TMC1-202ENST00000340019 EBF3Q9H4W6 596 aa7.97□□□□□ -1.13
TMC1-202ENST00000340019 UBE2ZQ9H832 354 aaPredicted RBP7.97□□□□□ -1.13
TMC1-202ENST00000340019 GLOD4Q9HC38 313 aa7.97□□□□□ -1.13
TMC1-202ENST00000340019 ABCB8Q9NUT2 735 aa7.97□□□□□ -1.13
TMC1-202ENST00000340019 ZNF446Q9NWS9 450 aa7.97□□□□□ -1.13
TMC1-202ENST00000340019 THG1LQ9NWX6 298 aaKnown RBP7.97□□□□□ -1.13
TMC1-202ENST00000340019 VPS51Q9UID3 782 aa7.97□□□□□ -1.13
TMC1-202ENST00000340019 MIA3Q5JRA6 1907 aa7.97□□□□□ -1.13
TMC1-202ENST00000340019 ANHXE9PGG2 379 aa7.97□□□□□ -1.13
TMC1-202ENST00000340019 MUSKO15146 869 aa7.97□□□□□ -1.13
TMC1-202ENST00000340019 PPFIA2O75334 1257 aa7.97□□□□□ -1.13
TMC1-202ENST00000340019 SUN1O94901 812 aa7.97□□□□□ -1.13
TMC1-202ENST00000340019 NFATC1O95644 943 aa7.97□□□□□ -1.13
TMC1-202ENST00000340019 PSMC3P17980 439 aa7.97□□□□□ -1.13
TMC1-202ENST00000340019 MAGEA3P43357 314 aa7.97□□□□□ -1.13
TMC1-202ENST00000340019 CDK16Q00536 496 aa7.97□□□□□ -1.13
TMC1-202ENST00000340019 INO80DQ53TQ3 878 aaPredicted RBP7.97□□□□□ -1.13
TMC1-202ENST00000340019 SYCP2LQ5T4T6 812 aa7.97□□□□□ -1.13
TMC1-202ENST00000340019 RELL1Q8IUW5 271 aa7.97□□□□□ -1.13
TMC1-202ENST00000340019 ETFBKMTQ8IXQ9 262 aa7.97□□□□□ -1.13
TMC1-202ENST00000340019 MREGQ8N565 214 aa7.97□□□□□ -1.13
TMC1-202ENST00000340019 PDCD7Q8N8D1 485 aaKnown RBP7.97□□□□□ -1.13
TMC1-202ENST00000340019 TADA1Q96BN2 335 aa7.97□□□□□ -1.13
TMC1-202ENST00000340019 OXNAD1Q96HP4 312 aaPredicted RBP7.97□□□□□ -1.13
TMC1-202ENST00000340019 PSKH2Q96QS6 385 aa7.97□□□□□ -1.13
TMC1-202ENST00000340019 RPP25Q9BUL9 199 aaKnown RBP7.97□□□□□ -1.13
TMC1-202ENST00000340019 MLPHQ9BV36 600 aaPredicted RBP7.97□□□□□ -1.13
TMC1-202ENST00000340019 C2orf49Q9BVC5 232 aaPredicted RBP7.97□□□□□ -1.13
TMC1-202ENST00000340019 ECT2Q9H8V3 914 aa7.97□□□□□ -1.13
TMC1-202ENST00000340019 UBA2Q9UBT2 640 aaPredicted RBP7.97□□□□□ -1.13
TMC1-202ENST00000340019 E7ESA3 106 aa7.96□□□□□ -1.14
TMC1-202ENST00000340019 F5H423 210 aaPredicted RBP7.96□□□□□ -1.14
TMC1-202ENST00000340019 GOLGA8MH3BSY2 632 aa7.96□□□□□ -1.14
TMC1-202ENST00000340019 ARNTLO00327 626 aa7.96□□□□□ -1.14
TMC1-202ENST00000340019 MBTPS2O43462 519 aa7.96□□□□□ -1.14
TMC1-202ENST00000340019 AP2A1O95782 977 aa7.96□□□□□ -1.14
TMC1-202ENST00000340019 CISD3P0C7P0 127 aa7.96□□□□□ -1.14
TMC1-202ENST00000340019 KCNA5P22460 613 aa7.96□□□□□ -1.14
TMC1-202ENST00000340019 HSPA9P38646 679 aaKnown RBP7.96□□□□□ -1.14
TMC1-202ENST00000340019 SMAD4Q13485 552 aaKnown RBP7.96□□□□□ -1.14
TMC1-202ENST00000340019 IHHQ14623 411 aa7.96□□□□□ -1.14
TMC1-202ENST00000340019 CYTH1Q15438 398 aa7.96□□□□□ -1.14
TMC1-202ENST00000340019 FUT11Q495W5 492 aa7.96□□□□□ -1.14
TMC1-202ENST00000340019 PITRM1Q5JRX3 1037 aa7.96□□□□□ -1.14
TMC1-202ENST00000340019 CAND1Q86VP6 1230 aaKnown RBP7.96□□□□□ -1.14
TMC1-202ENST00000340019 C12orf40Q86WS4 652 aa7.96□□□□□ -1.14
TMC1-202ENST00000340019 ARRDC2Q8TBH0 407 aa7.96□□□□□ -1.14
TMC1-202ENST00000340019 IMP4Q96G21 291 aaKnown RBP7.96□□□□□ -1.14
TMC1-202ENST00000340019 SERPINB12Q96P63 405 aa7.96□□□□□ -1.14
TMC1-202ENST00000340019 KXD1Q9BQD3 176 aa7.96□□□□□ -1.14
TMC1-202ENST00000340019 MGME1Q9BQP7 344 aa7.96□□□□□ -1.14
TMC1-202ENST00000340019 TSPYL1Q9H0U9 437 aa7.96□□□□□ -1.14
TMC1-202ENST00000340019 SLC25A51Q9H1U9 297 aa7.96□□□□□ -1.14
TMC1-202ENST00000340019 NT5MQ9NPB1 228 aa7.96□□□□□ -1.14
TMC1-202ENST00000340019 GGA2Q9UJY4 613 aa7.96□□□□□ -1.14
TMC1-202ENST00000340019 ERI2A8K979 691 aaKnown RBP7.96□□□□□ -1.14
TMC1-202ENST00000340019 E7EVH7 732 aa7.96□□□□□ -1.14
TMC1-202ENST00000340019 MMP2P08253 660 aa7.96□□□□□ -1.14
TMC1-202ENST00000340019 PABPC1P11940 636 aaKnown RBP7.96□□□□□ -1.14
TMC1-202ENST00000340019 CR2P20023 1033 aa7.96□□□□□ -1.14
TMC1-202ENST00000340019 MAXP61244 160 aa7.96□□□□□ -1.14
TMC1-202ENST00000340019 DHX9Q08211 1270 aaKnown RBP7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms