RNA–Protein interactions for RNA: ENST00000339701.7

CSMD3-202, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best)

Gene CSMD3, Length 10,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-202ENST00000339701 KLK3P07288 261 aaPredicted RBP3.33□□□□□ -1.88
CSMD3-202ENST00000339701 SNRPAP09012 282 aaKnown RBP3.33□□□□□ -1.88
CSMD3-202ENST00000339701 F8A1P23610 371 aa3.33□□□□□ -1.88
CSMD3-202ENST00000339701 DSG3P32926 999 aa3.33□□□□□ -1.88
CSMD3-202ENST00000339701 ADD2P35612 726 aa3.33□□□□□ -1.88
CSMD3-202ENST00000339701 GPC3P51654 580 aa3.33□□□□□ -1.88
CSMD3-202ENST00000339701 ZMYM1Q5SVZ6 1142 aa3.33□□□□□ -1.88
CSMD3-202ENST00000339701 FAXCQ5TGI0 409 aa3.33□□□□□ -1.88
CSMD3-202ENST00000339701 ZBTB49Q6ZSB9 765 aa3.33□□□□□ -1.88
CSMD3-202ENST00000339701 CPNE9Q8IYJ1 553 aa3.33□□□□□ -1.88
CSMD3-202ENST00000339701 AKAP1Q92667 903 aaKnown RBP eCLIP3.33□□□□□ -1.88
CSMD3-202ENST00000339701 CGRRF1Q99675 332 aa3.33□□□□□ -1.88
CSMD3-202ENST00000339701 MSTO1Q9BUK6 570 aa3.33□□□□□ -1.88
CSMD3-202ENST00000339701 C12orf65Q9H3J6 166 aaKnown RBP3.33□□□□□ -1.88
CSMD3-202ENST00000339701 DHX33Q9H6R0 707 aaKnown RBP3.33□□□□□ -1.88
CSMD3-202ENST00000339701 CD320Q9NPF0 282 aa3.33□□□□□ -1.88
CSMD3-202ENST00000339701 C12orf4Q9NQ89 552 aa3.33□□□□□ -1.88
CSMD3-202ENST00000339701 TMEM9Q9P0T7 183 aa3.33□□□□□ -1.88
CSMD3-202ENST00000339701 PTPN22Q9Y2R2 807 aa3.33□□□□□ -1.88
CSMD3-202ENST00000339701 TBC1D3DA0A087WVF3 549 aa3.33□□□□□ -1.88
CSMD3-202ENST00000339701 TBC1D3IA0A087WXS9 549 aa3.33□□□□□ -1.88
CSMD3-202ENST00000339701 TBC1D3EA0A087X179 549 aa3.33□□□□□ -1.88
CSMD3-202ENST00000339701 TBC1D3KA0A087X1G2 549 aa3.33□□□□□ -1.88
CSMD3-202ENST00000339701 A6NCN8 305 aa3.33□□□□□ -1.88
CSMD3-202ENST00000339701 TBC1D3FA6NER0 549 aaPredicted RBP3.33□□□□□ -1.88
CSMD3-202ENST00000339701 URADA6NGE7 173 aa3.33□□□□□ -1.88
CSMD3-202ENST00000339701 TBC1D3LB9A6J9 549 aa3.33□□□□□ -1.88
CSMD3-202ENST00000339701 F5H6K3 240 aa3.33□□□□□ -1.88
CSMD3-202ENST00000339701 TRDMT1O14717 391 aaKnown RBP3.33□□□□□ -1.88
CSMD3-202ENST00000339701 FBXO21O94952 628 aa3.33□□□□□ -1.88
CSMD3-202ENST00000339701 SGPL1O95470 568 aa3.33□□□□□ -1.88
CSMD3-202ENST00000339701 TBC1D3HP0C7X1 549 aa3.33□□□□□ -1.88
CSMD3-202ENST00000339701 HPGDP15428 266 aa3.33□□□□□ -1.88
CSMD3-202ENST00000339701 ADORA1P30542 326 aa3.33□□□□□ -1.88
CSMD3-202ENST00000339701 PGM1P36871 562 aa3.33□□□□□ -1.88
CSMD3-202ENST00000339701 ARRB1P49407 418 aaPredicted RBP3.33□□□□□ -1.88
CSMD3-202ENST00000339701 CLK3P49761 638 aaKnown RBP3.33□□□□□ -1.88
CSMD3-202ENST00000339701 CREB5Q02930 508 aa3.33□□□□□ -1.88
CSMD3-202ENST00000339701 KLRC3Q07444 240 aa3.33□□□□□ -1.88
CSMD3-202ENST00000339701 DBPQ10586 325 aaPredicted RBP3.33□□□□□ -1.88
CSMD3-202ENST00000339701 ILF3Q12906 894 aaKnown RBP eCLIP3.33□□□□□ -1.88
CSMD3-202ENST00000339701 DUOXA2Q1HG44 320 aa3.33□□□□□ -1.88
CSMD3-202ENST00000339701 FBXO43Q4G163 708 aa3.33□□□□□ -1.88
CSMD3-202ENST00000339701 RNF43Q68DV7 783 aa3.33□□□□□ -1.88
CSMD3-202ENST00000339701 TBC1D3GQ6DHY5 549 aa3.33□□□□□ -1.88
CSMD3-202ENST00000339701 TBC1D3CQ6IPX1 549 aa3.33□□□□□ -1.88
CSMD3-202ENST00000339701 EFCAB12Q6NXP0 572 aa3.33□□□□□ -1.88
CSMD3-202ENST00000339701 TATDN1Q6P1N9 297 aa3.33□□□□□ -1.88
CSMD3-202ENST00000339701 UNQ6126/PRO20091Q6UXV3 157 aa3.33□□□□□ -1.88
CSMD3-202ENST00000339701 ANKMY2Q8IV38 441 aa3.33□□□□□ -1.88
CSMD3-202ENST00000339701 TBC1D3Q8IZP1 549 aaPredicted RBP3.33□□□□□ -1.88
CSMD3-202ENST00000339701 BEND7Q8N7W2 519 aaPredicted RBP3.33□□□□□ -1.88
CSMD3-202ENST00000339701 SYTL5Q8TDW5 730 aaPredicted RBP3.33□□□□□ -1.88
CSMD3-202ENST00000339701 TEFMQ96QE5 360 aaKnown RBP3.33□□□□□ -1.88
CSMD3-202ENST00000339701 TRMT61BQ9BVS5 477 aaKnown RBP3.33□□□□□ -1.88
CSMD3-202ENST00000339701 CBX8Q9HC52 389 aa3.33□□□□□ -1.88
CSMD3-202ENST00000339701 KCND1Q9NSA2 647 aa3.33□□□□□ -1.88
CSMD3-202ENST00000339701 TMEM45AQ9NWC5 275 aa3.33□□□□□ -1.88
CSMD3-202ENST00000339701 MRTO4Q9UKD2 239 aaKnown RBP3.33□□□□□ -1.88
CSMD3-202ENST00000339701 PCDHB2Q9Y5E7 798 aa3.33□□□□□ -1.88
CSMD3-202ENST00000339701 PCDHGA4Q9Y5G9 962 aa3.33□□□□□ -1.88
CSMD3-202ENST00000339701 CABIN1Q9Y6J0 2220 aa3.33□□□□□ -1.88
CSMD3-202ENST00000339701 PDZK1P1A8MUH7 402 aa3.33□□□□□ -1.88
CSMD3-202ENST00000339701 PSIP1O75475 530 aaKnown RBP3.33□□□□□ -1.88
CSMD3-202ENST00000339701 DGAT1O75907 488 aa3.33□□□□□ -1.88
CSMD3-202ENST00000339701 TMEM62Q0P6H9 643 aa3.33□□□□□ -1.88
CSMD3-202ENST00000339701 CRHR2Q13324 411 aa3.33□□□□□ -1.88
CSMD3-202ENST00000339701 SLC18A3Q16572 532 aa3.33□□□□□ -1.88
CSMD3-202ENST00000339701 RGS21Q2M5E4 152 aa3.33□□□□□ -1.88
CSMD3-202ENST00000339701 ATP13A4Q4VNC1 1196 aa3.33□□□□□ -1.88
CSMD3-202ENST00000339701 TRIM68Q6AZZ1 485 aa3.33□□□□□ -1.88
CSMD3-202ENST00000339701 C15orf52Q6ZUT6 534 aaKnown RBP3.33□□□□□ -1.88
CSMD3-202ENST00000339701 RBBP8NLQ8NC74 664 aaPredicted RBP3.33□□□□□ -1.88
CSMD3-202ENST00000339701 SDR42E1Q8WUS8 393 aa3.33□□□□□ -1.88
CSMD3-202ENST00000339701 FAM84AQ96KN4 292 aa3.33□□□□□ -1.88
CSMD3-202ENST00000339701 CORO1BQ9BR76 489 aa3.33□□□□□ -1.88
CSMD3-202ENST00000339701 STK33Q9BYT3 514 aa3.33□□□□□ -1.88
CSMD3-202ENST00000339701 TTYH1Q9H313 450 aaPredicted RBP3.33□□□□□ -1.88
CSMD3-202ENST00000339701 NDOR1Q9UHB4 597 aa3.33□□□□□ -1.88
CSMD3-202ENST00000339701 CARD8Q9Y2G2 431 aa3.33□□□□□ -1.88
CSMD3-202ENST00000339701 PDCD11Q14690 1871 aaKnown RBP3.33□□□□□ -1.88
CSMD3-202ENST00000339701 LGALS16A8MUM7 142 aa3.33□□□□□ -1.88
CSMD3-202ENST00000339701 GLRA3O75311 464 aa3.33□□□□□ -1.88
CSMD3-202ENST00000339701 EPN2O95208 641 aa3.33□□□□□ -1.88
CSMD3-202ENST00000339701 ANP32DO95626 131 aa3.33□□□□□ -1.88
CSMD3-202ENST00000339701 IFNA16P05015 189 aa3.33□□□□□ -1.88
CSMD3-202ENST00000339701 ASGR1P07306 291 aa3.33□□□□□ -1.88
CSMD3-202ENST00000339701 MAPTP10636 758 aaKnown RBP3.33□□□□□ -1.88
CSMD3-202ENST00000339701 PLS3P13797 630 aa3.33□□□□□ -1.88
CSMD3-202ENST00000339701 VCAM1P19320 739 aa3.33□□□□□ -1.88
CSMD3-202ENST00000339701 LRPAP1P30533 357 aa3.33□□□□□ -1.88
CSMD3-202ENST00000339701 RPP38P78345 283 aaKnown RBP3.33□□□□□ -1.88
CSMD3-202ENST00000339701 FGL2Q14314 439 aa3.33□□□□□ -1.88
CSMD3-202ENST00000339701 IRGCQ6NXR0 463 aa3.33□□□□□ -1.88
CSMD3-202ENST00000339701 SZRD1Q7Z422 152 aa3.33□□□□□ -1.88
CSMD3-202ENST00000339701 CYP2U1Q7Z449 544 aa3.33□□□□□ -1.88
CSMD3-202ENST00000339701 TMPRSS6Q8IU80 811 aa3.33□□□□□ -1.88
CSMD3-202ENST00000339701 ZBED8Q8IZ13 594 aa3.33□□□□□ -1.88
CSMD3-202ENST00000339701 Q8N402 240 aa3.33□□□□□ -1.88
CSMD3-202ENST00000339701 OXR1Q8N573 874 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms