RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 CTDSP2O14595 271 aa9.8□□□□□ -0.84
PTCHD4-201ENST00000339488 SNNO75324 88 aaPredicted RBP9.8□□□□□ -0.84
PTCHD4-201ENST00000339488 AVILO75366 819 aa9.8□□□□□ -0.84
PTCHD4-201ENST00000339488 DEAF1O75398 565 aaPredicted RBP9.8□□□□□ -0.84
PTCHD4-201ENST00000339488 CIAO1O76071 339 aa9.8□□□□□ -0.84
PTCHD4-201ENST00000339488 PRKCBP05771 671 aa9.8□□□□□ -0.84
PTCHD4-201ENST00000339488 CYP2D6P10635 497 aa9.8□□□□□ -0.84
PTCHD4-201ENST00000339488 ZNF250P15622 560 aa9.8□□□□□ -0.84
PTCHD4-201ENST00000339488 TCF4P15884 667 aa9.8□□□□□ -0.84
PTCHD4-201ENST00000339488 MAPK4P31152 587 aa9.8□□□□□ -0.84
PTCHD4-201ENST00000339488 SOX11P35716 441 aa9.8□□□□□ -0.84
PTCHD4-201ENST00000339488 CYP2J2P51589 502 aa9.8□□□□□ -0.84
PTCHD4-201ENST00000339488 GPR85P60893 370 aa9.8□□□□□ -0.84
PTCHD4-201ENST00000339488 SLX4IPQ5VYV7 408 aa9.8□□□□□ -0.84
PTCHD4-201ENST00000339488 RAP1GAP2Q684P5 730 aa9.8□□□□□ -0.84
PTCHD4-201ENST00000339488 SLC47A2Q86VL8 602 aa9.8□□□□□ -0.84
PTCHD4-201ENST00000339488 LYSMD2Q8IV50 215 aa9.8□□□□□ -0.84
PTCHD4-201ENST00000339488 MAPKAPK5Q8IW41 473 aa9.8□□□□□ -0.84
PTCHD4-201ENST00000339488 UNC45BQ8IWX7 931 aa9.8□□□□□ -0.84
PTCHD4-201ENST00000339488 MINDY2Q8NBR6 621 aa9.8□□□□□ -0.84
PTCHD4-201ENST00000339488 FBXW5Q969U6 566 aa9.8□□□□□ -0.84
PTCHD4-201ENST00000339488 MBOAT7Q96N66 472 aa9.8□□□□□ -0.84
PTCHD4-201ENST00000339488 OR52B2Q96RD2 323 aa9.8□□□□□ -0.84
PTCHD4-201ENST00000339488 DHRS4Q9BTZ2 278 aa9.8□□□□□ -0.84
PTCHD4-201ENST00000339488 FUNDC2Q9BWH2 189 aa9.8□□□□□ -0.84
PTCHD4-201ENST00000339488 SPC25Q9HBM1 224 aa9.8□□□□□ -0.84
PTCHD4-201ENST00000339488 IFT80Q9P2H3 777 aaPredicted RBP9.8□□□□□ -0.84
PTCHD4-201ENST00000339488 TEKT2Q9UIF3 430 aa9.8□□□□□ -0.84
PTCHD4-201ENST00000339488 MRPS7Q9Y2R9 242 aaKnown RBP9.8□□□□□ -0.84
PTCHD4-201ENST00000339488 IQANK1A0A1B0GTG1 560 aa9.79□□□□□ -0.84
PTCHD4-201ENST00000339488 TCRBV9S1A1TA0A576 114 aa9.79□□□□□ -0.84
PTCHD4-201ENST00000339488 OR5K4A6NMS3 321 aa9.79□□□□□ -0.84
PTCHD4-201ENST00000339488 PDZK1P1A8MUH7 402 aa9.79□□□□□ -0.84
PTCHD4-201ENST00000339488 KLF11O14901 512 aa9.79□□□□□ -0.84
PTCHD4-201ENST00000339488 RBP1P09455 135 aa9.79□□□□□ -0.84
PTCHD4-201ENST00000339488 WEE2P0C1S8 567 aa9.79□□□□□ -0.84
PTCHD4-201ENST00000339488 GARSP41250 739 aaKnown RBP9.79□□□□□ -0.84
PTCHD4-201ENST00000339488 NPTX2P47972 431 aa9.79□□□□□ -0.84
PTCHD4-201ENST00000339488 LEPRP48357 1165 aaKnown RBP9.79□□□□□ -0.84
PTCHD4-201ENST00000339488 TAS2R40P59535 323 aa9.79□□□□□ -0.84
PTCHD4-201ENST00000339488 DYNLT1P63172 113 aa9.79□□□□□ -0.84
PTCHD4-201ENST00000339488 GEN1Q17RS7 908 aa9.79□□□□□ -0.84
PTCHD4-201ENST00000339488 FASTKD1Q53R41 847 aaKnown RBP9.79□□□□□ -0.84
PTCHD4-201ENST00000339488 COLEC12Q5KU26 742 aa9.79□□□□□ -0.84
PTCHD4-201ENST00000339488 TMEM198Q66K66 360 aa9.79□□□□□ -0.84
PTCHD4-201ENST00000339488 PMF1Q6P1K2 205 aa9.79□□□□□ -0.84
PTCHD4-201ENST00000339488 NLGN4XQ8N0W4 816 aa9.79□□□□□ -0.84
PTCHD4-201ENST00000339488 SNX31Q8N9S9 440 aa9.79□□□□□ -0.84
PTCHD4-201ENST00000339488 ACO2Q99798 780 aaKnown RBP9.79□□□□□ -0.84
PTCHD4-201ENST00000339488 WDR55Q9H6Y2 383 aaPredicted RBP9.79□□□□□ -0.84
PTCHD4-201ENST00000339488 HOMER2Q9NSB8 354 aa9.79□□□□□ -0.84
PTCHD4-201ENST00000339488 DPP3Q9NY33 737 aa9.79□□□□□ -0.84
PTCHD4-201ENST00000339488 DPP7Q9UHL4 492 aa9.79□□□□□ -0.84
PTCHD4-201ENST00000339488 TMCC3Q9ULS5 477 aa9.79□□□□□ -0.84
PTCHD4-201ENST00000339488 AKAP11Q9UKA4 1901 aa9.79□□□□□ -0.84
PTCHD4-201ENST00000339488 ASTN1O14525 1302 aa9.79□□□□□ -0.84
PTCHD4-201ENST00000339488 KBTBD13C9JR72 458 aa9.79□□□□□ -0.84
PTCHD4-201ENST00000339488 DDAH1O94760 285 aa9.79□□□□□ -0.84
PTCHD4-201ENST00000339488 TMEM63AO94886 807 aa9.79□□□□□ -0.84
PTCHD4-201ENST00000339488 PSKH1P11801 424 aa9.79□□□□□ -0.84
PTCHD4-201ENST00000339488 IL1R1P14778 569 aa9.79□□□□□ -0.84
PTCHD4-201ENST00000339488 ITGB6P18564 788 aa9.79□□□□□ -0.84
PTCHD4-201ENST00000339488 ME2P23368 584 aa9.79□□□□□ -0.84
PTCHD4-201ENST00000339488 HTR1BP28222 390 aa9.79□□□□□ -0.84
PTCHD4-201ENST00000339488 MAN1A1P33908 653 aa9.79□□□□□ -0.84
PTCHD4-201ENST00000339488 SLC1A6P48664 564 aa9.79□□□□□ -0.84
PTCHD4-201ENST00000339488 FMO5P49326 533 aa9.79□□□□□ -0.84
PTCHD4-201ENST00000339488 GDF10P55107 478 aa9.79□□□□□ -0.84
PTCHD4-201ENST00000339488 POLR2GP62487 172 aaKnown RBP eCLIP9.79□□□□□ -0.84
PTCHD4-201ENST00000339488 KLF1Q13351 362 aaPredicted RBP9.79□□□□□ -0.84
PTCHD4-201ENST00000339488 LAMC2Q13753 1193 aa9.79□□□□□ -0.84
PTCHD4-201ENST00000339488 PITRM1Q5JRX3 1037 aa9.79□□□□□ -0.84
PTCHD4-201ENST00000339488 TEDDM1Q5T9Z0 273 aa9.79□□□□□ -0.84
PTCHD4-201ENST00000339488 MROH9Q5TGP6 573 aa9.79□□□□□ -0.84
PTCHD4-201ENST00000339488 PLEKHM3Q6ZWE6 761 aa9.79□□□□□ -0.84
PTCHD4-201ENST00000339488 NDUFAF2Q8N183 169 aa9.79□□□□□ -0.84
PTCHD4-201ENST00000339488 LRRC71Q8N4P6 559 aa9.79□□□□□ -0.84
PTCHD4-201ENST00000339488 MAPK15Q8TD08 544 aa9.79□□□□□ -0.84
PTCHD4-201ENST00000339488 FYTTD1Q96QD9 318 aaKnown RBP9.79□□□□□ -0.84
PTCHD4-201ENST00000339488 SERPINI1Q99574 410 aa9.79□□□□□ -0.84
PTCHD4-201ENST00000339488 VRTNQ9H8Y1 702 aa9.79□□□□□ -0.84
PTCHD4-201ENST00000339488 WDR41Q9HAD4 459 aa9.79□□□□□ -0.84
PTCHD4-201ENST00000339488 PKD2L1Q9P0L9 805 aa9.79□□□□□ -0.84
PTCHD4-201ENST00000339488 SNX8Q9Y5X2 465 aa9.79□□□□□ -0.84
PTCHD4-201ENST00000339488 CASZ1Q86V15 1759 aa9.79□□□□□ -0.84
PTCHD4-201ENST00000339488 ATP8B3O60423 1300 aa9.79□□□□□ -0.84
PTCHD4-201ENST00000339488 RIC1Q4ADV7 1423 aa9.79□□□□□ -0.84
PTCHD4-201ENST00000339488 LAD1O00515 517 aa9.78□□□□□ -0.84
PTCHD4-201ENST00000339488 VAPBO95292 243 aa9.78□□□□□ -0.84
PTCHD4-201ENST00000339488 BPGMP07738 259 aa9.78□□□□□ -0.84
PTCHD4-201ENST00000339488 FAM86B2P0C5J1 330 aa9.78□□□□□ -0.84
PTCHD4-201ENST00000339488 VBP1P61758 197 aa9.78□□□□□ -0.84
PTCHD4-201ENST00000339488 BNIP2Q12982 314 aa9.78□□□□□ -0.84
PTCHD4-201ENST00000339488 KCNT1Q5JUK3 1230 aa9.78□□□□□ -0.84
PTCHD4-201ENST00000339488 HABP4Q5JVS0 413 aaKnown RBP9.78□□□□□ -0.84
PTCHD4-201ENST00000339488 ATF7IP2Q5U623 682 aa9.78□□□□□ -0.84
PTCHD4-201ENST00000339488 EPHX4Q8IUS5 362 aa9.78□□□□□ -0.84
PTCHD4-201ENST00000339488 CCNYL1Q8N7R7 359 aa9.78□□□□□ -0.84
PTCHD4-201ENST00000339488 KYQ8NBH2 561 aa9.78□□□□□ -0.84
PTCHD4-201ENST00000339488 TRIM63Q969Q1 353 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms