RNA–Protein interactions for RNA: ENST00000331563.6

PKP3-201, Transcript of plakophilin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKP3, Length 2,809 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-201ENST00000331563 CDO1Q16878 200 aa18.43■□□□□ 0.54
PKP3-201ENST00000331563 TRIM16LQ309B1 348 aa18.43■□□□□ 0.54
PKP3-201ENST00000331563 LSM12Q3MHD2 195 aaKnown RBP18.43■□□□□ 0.54
PKP3-201ENST00000331563 ZNF280DQ6N043 979 aa18.43■□□□□ 0.54
PKP3-201ENST00000331563 CYP2R1Q6VVX0 501 aa18.43■□□□□ 0.54
PKP3-201ENST00000331563 TMEM26Q6ZUK4 368 aa18.43■□□□□ 0.54
PKP3-201ENST00000331563 C11orf74Q86VG3 221 aa18.43■□□□□ 0.54
PKP3-201ENST00000331563 MOCOSQ96EN8 888 aa18.43■□□□□ 0.54
PKP3-201ENST00000331563 RPF2Q9H7B2 306 aaKnown RBP18.43■□□□□ 0.54
PKP3-201ENST00000331563 PALMDQ9NP74 551 aa18.43■□□□□ 0.54
PKP3-201ENST00000331563 PDLIM7Q9NR12 457 aa18.43■□□□□ 0.54
PKP3-201ENST00000331563 CISHQ9NSE2 258 aa18.43■□□□□ 0.54
PKP3-201ENST00000331563 KLHL3Q9UH77 587 aa18.43■□□□□ 0.54
PKP3-201ENST00000331563 CNTN6Q9UQ52 1028 aa18.43■□□□□ 0.54
PKP3-201ENST00000331563 CFAP99D6REC4 459 aa18.42■□□□□ 0.54
PKP3-201ENST00000331563 TRUB2O95900 331 aaKnown RBP18.42■□□□□ 0.54
PKP3-201ENST00000331563 EDN1P05305 212 aa18.42■□□□□ 0.54
PKP3-201ENST00000331563 BMXP51813 675 aa18.42■□□□□ 0.54
PKP3-201ENST00000331563 XKR3Q5GH77 459 aa18.42■□□□□ 0.54
PKP3-201ENST00000331563 FAM47CQ5HY64 1035 aa18.42■□□□□ 0.54
PKP3-201ENST00000331563 AARS2Q5JTZ9 985 aaKnown RBP18.42■□□□□ 0.54
PKP3-201ENST00000331563 NAPRTQ6XQN6 538 aa18.42■□□□□ 0.54
PKP3-201ENST00000331563 GET4Q7L5D6 327 aaPredicted RBP18.42■□□□□ 0.54
PKP3-201ENST00000331563 CMC1Q7Z7K0 106 aa18.42■□□□□ 0.54
PKP3-201ENST00000331563 PCDH20Q8N6Y1 951 aaKnown RBP18.42■□□□□ 0.54
PKP3-201ENST00000331563 TRAPPC12Q8WVT3 735 aa18.42■□□□□ 0.54
PKP3-201ENST00000331563 VPS51Q9UID3 782 aa18.42■□□□□ 0.54
PKP3-201ENST00000331563 CDH7Q9ULB5 785 aa18.42■□□□□ 0.54
PKP3-201ENST00000331563 C1orf232A0A0U1RR37 186 aa18.42■□□□□ 0.54
PKP3-201ENST00000331563 ACOT8O14734 319 aa18.42■□□□□ 0.54
PKP3-201ENST00000331563 GNA12Q03113 381 aa18.42■□□□□ 0.54
PKP3-201ENST00000331563 SF3B4Q15427 424 aaKnown RBP eCLIP18.42■□□□□ 0.541e-6■■■□□ 15.6
PKP3-201ENST00000331563 PPP2R2DQ66LE6 453 aa18.42■□□□□ 0.54
PKP3-201ENST00000331563 SCYL2Q6P3W7 929 aa18.42■□□□□ 0.54
PKP3-201ENST00000331563 LYSMD3Q7Z3D4 306 aa18.42■□□□□ 0.54
PKP3-201ENST00000331563 HERC6Q8IVU3 1022 aa18.42■□□□□ 0.54
PKP3-201ENST00000331563 ILKAPQ9H0C8 392 aaPredicted RBP18.42■□□□□ 0.54
PKP3-201ENST00000331563 LOXHD1Q8IVV2 1947 aa18.42■□□□□ 0.54
PKP3-201ENST00000331563 INHBBP09529 407 aa18.41■□□□□ 0.54
PKP3-201ENST00000331563 CLDN10P78369 228 aa18.41■□□□□ 0.54
PKP3-201ENST00000331563 SIX6OS1Q8N1H7 587 aa18.41■□□□□ 0.54
PKP3-201ENST00000331563 LRRC71Q8N4P6 559 aa18.41■□□□□ 0.54
PKP3-201ENST00000331563 TMCO5AQ8N6Q1 288 aa18.41■□□□□ 0.54
PKP3-201ENST00000331563 RDM1Q8NG50 284 aa18.41■□□□□ 0.54
PKP3-201ENST00000331563 CCDC138Q96M89 665 aa18.41■□□□□ 0.54
PKP3-201ENST00000331563 SIAEQ9HAT2 523 aa18.41■□□□□ 0.54
PKP3-201ENST00000331563 VPS28Q9UK41 221 aa18.41■□□□□ 0.54
PKP3-201ENST00000331563 MAFBQ9Y5Q3 323 aaPredicted RBP18.41■□□□□ 0.54
PKP3-201ENST00000331563 PSAT1Q9Y617 370 aa18.41■□□□□ 0.54
PKP3-201ENST00000331563 A0A1W2PQ67 120 aa18.41■□□□□ 0.54
PKP3-201ENST00000331563 KRBA1A5PL33 1030 aa18.41■□□□□ 0.54
PKP3-201ENST00000331563 NOTOA8MTQ0 251 aa18.41■□□□□ 0.54
PKP3-201ENST00000331563 CST3P01034 146 aaPredicted RBP18.41■□□□□ 0.54
PKP3-201ENST00000331563 MPSTP25325 297 aa18.41■□□□□ 0.54
PKP3-201ENST00000331563 ZNF132P52740 706 aa18.41■□□□□ 0.54
PKP3-201ENST00000331563 SEL1L3Q68CR1 1132 aa18.41■□□□□ 0.54
PKP3-201ENST00000331563 ACO2Q99798 780 aaKnown RBP18.41■□□□□ 0.54
PKP3-201ENST00000331563 MSTO1Q9BUK6 570 aa18.41■□□□□ 0.54
PKP3-201ENST00000331563 HAPLN2Q9GZV7 340 aa18.41■□□□□ 0.54
PKP3-201ENST00000331563 TRIM64CA6NLI5 447 aa18.41■□□□□ 0.54
PKP3-201ENST00000331563 H0YJX3 145 aa18.41■□□□□ 0.54
PKP3-201ENST00000331563 TRIM38O00635 465 aa18.41■□□□□ 0.54
PKP3-201ENST00000331563 AKAP10O43572 662 aa18.41■□□□□ 0.54
PKP3-201ENST00000331563 METTL18O95568 372 aa18.41■□□□□ 0.54
PKP3-201ENST00000331563 GNAO1P09471 354 aa18.41■□□□□ 0.54
PKP3-201ENST00000331563 MYCLP1P12525 358 aaPredicted RBP18.41■□□□□ 0.54
PKP3-201ENST00000331563 STAT5BP51692 787 aa18.41■□□□□ 0.54
PKP3-201ENST00000331563 SESN2P58004 480 aaPredicted RBP18.41■□□□□ 0.54
PKP3-201ENST00000331563 NME3Q13232 169 aa18.41■□□□□ 0.54
PKP3-201ENST00000331563 SH3PXD2AQ5TCZ1 1133 aa18.41■□□□□ 0.54
PKP3-201ENST00000331563 TAMM41Q96BW9 452 aa18.41■□□□□ 0.54
PKP3-201ENST00000331563 OLFM1Q99784 485 aa18.41■□□□□ 0.54
PKP3-201ENST00000331563 NTPCRQ9BSD7 190 aaKnown RBP18.41■□□□□ 0.54
PKP3-201ENST00000331563 ANKRD60Q9BZ19 345 aa18.41■□□□□ 0.54
PKP3-201ENST00000331563 POLR1BQ9H9Y6 1135 aa18.41■□□□□ 0.54
PKP3-201ENST00000331563 ERVK-11Q9UQG0 969 aa18.41■□□□□ 0.54
PKP3-201ENST00000331563 ZNF701M0R085 212 aaPredicted RBP18.4■□□□□ 0.54
PKP3-201ENST00000331563 SOCS7O14512 581 aa18.4■□□□□ 0.54
PKP3-201ENST00000331563 HMGCRP04035 888 aa18.4■□□□□ 0.54
PKP3-201ENST00000331563 S100BP04271 92 aaPredicted RBP18.4■□□□□ 0.54
PKP3-201ENST00000331563 CAPNS1P04632 268 aa18.4■□□□□ 0.54
PKP3-201ENST00000331563 CHRNGP07510 517 aa18.4■□□□□ 0.54
PKP3-201ENST00000331563 MAP4P27816 1152 aaKnown RBP18.4■□□□□ 0.54
PKP3-201ENST00000331563 MZF1P28698 734 aaPredicted RBP18.4■□□□□ 0.54
PKP3-201ENST00000331563 PMS2P3Q13401 168 aa18.4■□□□□ 0.54
PKP3-201ENST00000331563 BPHLQ86WA6 291 aaPredicted RBP18.4■□□□□ 0.54
PKP3-201ENST00000331563 SLC15A4Q8N697 577 aa18.4■□□□□ 0.54
PKP3-201ENST00000331563 PLD5Q8N7P1 536 aa18.4■□□□□ 0.54
PKP3-201ENST00000331563 PPP1R16BQ96T49 567 aa18.4■□□□□ 0.54
PKP3-201ENST00000331563 EFHD1Q9BUP0 239 aa18.4■□□□□ 0.54
PKP3-201ENST00000331563 TARS2Q9BW92 718 aaKnown RBP18.4■□□□□ 0.54
PKP3-201ENST00000331563 MOCS1Q9NZB8 636 aa18.4■□□□□ 0.54
PKP3-201ENST00000331563 SAC3D1A6NKF1 404 aa18.4■□□□□ 0.54
PKP3-201ENST00000331563 PRKCGP05129 697 aa18.4■□□□□ 0.54
PKP3-201ENST00000331563 C8BP07358 591 aa18.4■□□□□ 0.54
PKP3-201ENST00000331563 ZNF182P17025 639 aaPredicted RBP18.4■□□□□ 0.54
PKP3-201ENST00000331563 POLR2EP19388 210 aaKnown RBP18.4■□□□□ 0.54
PKP3-201ENST00000331563 YWHAEP62258 255 aaKnown RBP18.4■□□□□ 0.54
PKP3-201ENST00000331563 MOGQ16653 247 aa18.4■□□□□ 0.54
PKP3-201ENST00000331563 CDR2LQ86X02 465 aaPredicted RBP18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms